RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 DBNDD2Q9BQY9 259 aa18.44■□□□□ 0.54
GINS3-203ENST00000426538 SEC24BO95487 1268 aa18.43■□□□□ 0.54
GINS3-203ENST00000426538 DDX46Q7L014 1031 aaKnown RBP18.43■□□□□ 0.54
GINS3-203ENST00000426538 ANO8Q9HCE9 1232 aaPredicted RBP18.43■□□□□ 0.54
GINS3-203ENST00000426538 POLRMTO00411 1230 aaKnown RBP18.43■□□□□ 0.54
GINS3-203ENST00000426538 PDE8BO95263 885 aa18.43■□□□□ 0.54
GINS3-203ENST00000426538 GORABQ5T7V8 394 aa18.43■□□□□ 0.54
GINS3-203ENST00000426538 MAP4K4O95819 1239 aaPredicted RBP18.42■□□□□ 0.54
GINS3-203ENST00000426538 ATP5JP18859 108 aa18.42■□□□□ 0.54
GINS3-203ENST00000426538 DDR1Q08345 913 aa18.42■□□□□ 0.54
GINS3-203ENST00000426538 TUBGCP6Q96RT7 1819 aa18.41■□□□□ 0.54
GINS3-203ENST00000426538 ATP2B3Q16720 1220 aa18.41■□□□□ 0.54
GINS3-203ENST00000426538 BOLA2Q9H3K6 86 aa18.41■□□□□ 0.54
GINS3-203ENST00000426538 BSDC1Q9NW68 430 aaPredicted RBP18.41■□□□□ 0.54
GINS3-203ENST00000426538 PARP3Q9Y6F1 533 aa18.41■□□□□ 0.54
GINS3-203ENST00000426538 ZNF609O15014 1411 aa18.4■□□□□ 0.54
GINS3-203ENST00000426538 MFAP1P55081 439 aaKnown RBP18.4■□□□□ 0.54
GINS3-203ENST00000426538 RPS8P62241 208 aaKnown RBP18.4■□□□□ 0.54
GINS3-203ENST00000426538 CCDC158Q5M9N0 1113 aa18.4■□□□□ 0.54
GINS3-203ENST00000426538 VGLL2Q8N8G2 317 aa18.4■□□□□ 0.54
GINS3-203ENST00000426538 EVI5LQ96CN4 794 aa18.4■□□□□ 0.54
GINS3-203ENST00000426538 XAGE2Q96GT9 111 aa18.4■□□□□ 0.54
GINS3-203ENST00000426538 RIC1Q4ADV7 1423 aa18.39■□□□□ 0.53
GINS3-203ENST00000426538 PUM3Q15397 648 aaKnown RBP18.39■□□□□ 0.53
GINS3-203ENST00000426538 HELBQ8NG08 1087 aaPredicted RBP18.39■□□□□ 0.53
GINS3-203ENST00000426538 RPGRQ92834 1020 aaKnown RBP18.39■□□□□ 0.53
GINS3-203ENST00000426538 CELF1Q92879 486 aaKnown RBP18.39■□□□□ 0.53
GINS3-203ENST00000426538 MMP10P09238 476 aa18.38■□□□□ 0.53
GINS3-203ENST00000426538 CHRNDQ07001 517 aa18.38■□□□□ 0.53
GINS3-203ENST00000426538 MSL1Q68DK7 614 aa18.38■□□□□ 0.53
GINS3-203ENST00000426538 LPIN2Q92539 896 aa18.38■□□□□ 0.53
GINS3-203ENST00000426538 TAF5LO75529 589 aa18.37■□□□□ 0.53
GINS3-203ENST00000426538 TTC39AQ5SRH9 613 aa18.37■□□□□ 0.53
GINS3-203ENST00000426538 SLC5A1P13866 664 aa18.37■□□□□ 0.53
GINS3-203ENST00000426538 ANP32AP39687 249 aaKnown RBP18.37■□□□□ 0.53
GINS3-203ENST00000426538 LRP5O75197 1615 aa18.37■□□□□ 0.53
GINS3-203ENST00000426538 CASZ1Q86V15 1759 aa18.36■□□□□ 0.53
GINS3-203ENST00000426538 IFIT1P09914 478 aaKnown RBP18.36■□□□□ 0.53
GINS3-203ENST00000426538 CHMLP26374 656 aa18.36■□□□□ 0.53
GINS3-203ENST00000426538 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
GINS3-203ENST00000426538 FGFR2P21802 821 aa18.35■□□□□ 0.53
GINS3-203ENST00000426538 ADORA1P30542 326 aa18.35■□□□□ 0.53
GINS3-203ENST00000426538 GRAPQ13588 217 aa18.35■□□□□ 0.53
GINS3-203ENST00000426538 CRY2Q49AN0 593 aa18.35■□□□□ 0.53
GINS3-203ENST00000426538 GRAPLQ8TC17 118 aaPredicted RBP18.35■□□□□ 0.53
GINS3-203ENST00000426538 DNAJC2Q99543 621 aaKnown RBP18.35■□□□□ 0.53
GINS3-203ENST00000426538 HAUS7Q99871 368 aa18.35■□□□□ 0.53
GINS3-203ENST00000426538 BRIP1Q9BX63 1249 aa18.35■□□□□ 0.53
GINS3-203ENST00000426538 MINPP1Q9UNW1 487 aa18.35■□□□□ 0.53
GINS3-203ENST00000426538 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
GINS3-203ENST00000426538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.35■□□□□ 0.53
GINS3-203ENST00000426538 AK9Q5TCS8 1911 aa18.34■□□□□ 0.53
GINS3-203ENST00000426538 REC8O95072 547 aa18.34■□□□□ 0.53
GINS3-203ENST00000426538 FSD1Q9BTV5 496 aa18.34■□□□□ 0.53
GINS3-203ENST00000426538 C22orf23Q9BZE7 217 aa18.34■□□□□ 0.53
GINS3-203ENST00000426538 ANKRD2Q9GZV1 360 aa18.34■□□□□ 0.53
GINS3-203ENST00000426538 TNRC6CQ9HCJ0 1690 aaKnown RBP18.34■□□□□ 0.53
GINS3-203ENST00000426538 TAF1P21675 1872 aa18.34■□□□□ 0.53
GINS3-203ENST00000426538 KLRG2A4D1S0 409 aaPredicted RBP18.33■□□□□ 0.52
GINS3-203ENST00000426538 HIP1O00291 1037 aa18.33■□□□□ 0.52
GINS3-203ENST00000426538 PDE6BP35913 854 aa18.33■□□□□ 0.52
GINS3-203ENST00000426538 DIAPH3Q9NSV4 1193 aa18.33■□□□□ 0.52
GINS3-203ENST00000426538 QSER1Q2KHR3 1735 aa18.33■□□□□ 0.52
GINS3-203ENST00000426538 UBE4AQ14139 1066 aa18.32■□□□□ 0.52
GINS3-203ENST00000426538 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
GINS3-203ENST00000426538 ESYT1Q9BSJ8 1104 aa18.32■□□□□ 0.52
GINS3-203ENST00000426538 CCDC102BQ68D86 513 aa18.32■□□□□ 0.52
GINS3-203ENST00000426538 SLC16A10Q8TF71 515 aa18.32■□□□□ 0.52
GINS3-203ENST00000426538 ZNF512BQ96KM6 892 aaPredicted RBP18.32■□□□□ 0.52
GINS3-203ENST00000426538 TBC1D32Q96NH3 1257 aa18.32■□□□□ 0.52
GINS3-203ENST00000426538 PAG1Q9NWQ8 432 aa18.32■□□□□ 0.52
GINS3-203ENST00000426538 SNAP23O00161 211 aa18.31■□□□□ 0.52
GINS3-203ENST00000426538 BBOX1O75936 387 aa18.31■□□□□ 0.52
GINS3-203ENST00000426538 UQCRFS1P1P0C7P4 283 aa18.31■□□□□ 0.52
GINS3-203ENST00000426538 HOXA10P31260 410 aaPredicted RBP18.31■□□□□ 0.52
GINS3-203ENST00000426538 KCNJ4P48050 445 aa18.31■□□□□ 0.52
GINS3-203ENST00000426538 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
GINS3-203ENST00000426538 NDUFB9Q9Y6M9 179 aa18.31■□□□□ 0.52
GINS3-203ENST00000426538 COL4A1P02462 1669 aa18.3■□□□□ 0.52
GINS3-203ENST00000426538 GOLIM4O00461 696 aa18.3■□□□□ 0.52
GINS3-203ENST00000426538 CWC27Q6UX04 472 aaKnown RBP18.3■□□□□ 0.52
GINS3-203ENST00000426538 EDC3Q96F86 508 aaKnown RBP18.3■□□□□ 0.52
GINS3-203ENST00000426538 CRAMP1Q96RY5 1269 aa18.3■□□□□ 0.52
GINS3-203ENST00000426538 NRXN2Q9P2S2 1712 aa18.3■□□□□ 0.52
GINS3-203ENST00000426538 PHKA1P46020 1223 aa18.29■□□□□ 0.52
GINS3-203ENST00000426538 CAVIN4Q5BKX8 364 aa18.29■□□□□ 0.52
GINS3-203ENST00000426538 KBTBD3Q8NAB2 608 aa18.29■□□□□ 0.52
GINS3-203ENST00000426538 ANKIB1Q9P2G1 1089 aa18.29■□□□□ 0.52
GINS3-203ENST00000426538 SRGNP10124 158 aa18.28■□□□□ 0.52
GINS3-203ENST00000426538 NPR1P16066 1061 aa18.28■□□□□ 0.52
GINS3-203ENST00000426538 ALDH1B1P30837 517 aa18.28■□□□□ 0.52
GINS3-203ENST00000426538 LRRFIP1Q32MZ4 808 aaKnown RBP18.28■□□□□ 0.52
GINS3-203ENST00000426538 TICAM2Q86XR7 235 aa18.28■□□□□ 0.52
GINS3-203ENST00000426538 PDGFDQ9GZP0 370 aaPredicted RBP18.28■□□□□ 0.52
GINS3-203ENST00000426538 SNRKQ9NRH2 765 aa18.28■□□□□ 0.52
GINS3-203ENST00000426538 ARID4AP29374 1257 aaPredicted RBP18.27■□□□□ 0.52
GINS3-203ENST00000426538 MCAMP43121 646 aa18.27■□□□□ 0.52
GINS3-203ENST00000426538 TMC4Q7Z404 712 aa18.27■□□□□ 0.52
GINS3-203ENST00000426538 VPS37DQ86XT2 251 aa18.27■□□□□ 0.52
GINS3-203ENST00000426538 UPF1Q92900 1129 aaKnown RBP eCLIP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms