RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 U2AF2P26368 475 aaKnown RBP eCLIP16.75■□□□□ 0.275e-7■■■■□ 21.4
TPM3P9-201ENST00000424846 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
TPM3P9-201ENST00000424846 HMG20BQ9P0W2 317 aa16.75■□□□□ 0.27
TPM3P9-201ENST00000424846 ZSCAN20P17040 1043 aaPredicted RBP16.75■□□□□ 0.27
TPM3P9-201ENST00000424846 ATP5JP18859 108 aa16.75■□□□□ 0.27
TPM3P9-201ENST00000424846 ZC3H6P61129 1189 aaKnown RBP16.75■□□□□ 0.27
TPM3P9-201ENST00000424846 GUCY1B3Q02153 619 aa16.75■□□□□ 0.27
TPM3P9-201ENST00000424846 LRP10Q7Z4F1 713 aa16.75■□□□□ 0.27
TPM3P9-201ENST00000424846 NCOA5Q9HCD5 579 aaKnown RBP16.75■□□□□ 0.27
TPM3P9-201ENST00000424846 NCAPD2Q15021 1401 aa16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 METTL22Q9BUU2 404 aaPredicted RBP16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 ZHX1Q9UKY1 873 aaPredicted RBP16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 H3BQV1 296 aa16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 CCT2P78371 535 aaKnown RBP16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 APOBRQ0VD83 1088 aa16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 IFFO2Q5TF58 517 aa16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 HDAC5Q9UQL6 1122 aa16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 KDM6AO15550 1401 aaPredicted RBP16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 ADGRL3Q9HAR2 1447 aa16.74■□□□□ 0.27
TPM3P9-201ENST00000424846 NEXNQ0ZGT2 675 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 FBXW7Q969H0 707 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 COPRSQ9NQ92 184 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 MRC1P22897 1456 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 USP27XA6NNY8 438 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 TPM3P06753 285 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 IQCB1Q15051 598 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 PDCL2Q8N4E4 241 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 CLIP2Q9UDT6 1046 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 FER1L4A9Z1Z3 1794 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 CTIFO43310 598 aaKnown RBP16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 NSUN7Q8NE18 718 aaKnown RBP16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 ANKRD7Q92527 254 aa16.73■□□□□ 0.27
TPM3P9-201ENST00000424846 ANKRD13DQ6ZTN6 518 aa16.72■□□□□ 0.27
TPM3P9-201ENST00000424846 NCBP1Q09161 790 aaKnown RBP16.72■□□□□ 0.27
TPM3P9-201ENST00000424846 CHAF1AQ13111 956 aaPredicted RBP16.72■□□□□ 0.27
TPM3P9-201ENST00000424846 USP28Q96RU2 1077 aa16.72■□□□□ 0.27
TPM3P9-201ENST00000424846 SLC52A2Q9HAB3 445 aa16.71■□□□□ 0.27
TPM3P9-201ENST00000424846 MCMDC2Q4G0Z9 681 aa16.71■□□□□ 0.27
TPM3P9-201ENST00000424846 KLHL34Q8N239 644 aa16.71■□□□□ 0.27
TPM3P9-201ENST00000424846 SMARCC2Q8TAQ2 1214 aa16.71■□□□□ 0.27
TPM3P9-201ENST00000424846 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
TPM3P9-201ENST00000424846 PHRF1Q9P1Y6 1649 aaKnown RBP16.71■□□□□ 0.27
TPM3P9-201ENST00000424846 LAMA4Q16363 1823 aa16.71■□□□□ 0.27
TPM3P9-201ENST00000424846 TNNT1P13805 278 aa16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 TIMM10P62072 90 aa16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 FGD1P98174 961 aa16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 ILDR1Q86SU0 546 aaPredicted RBP16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 CCAR1Q8IX12 1150 aaKnown RBP16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 NAP1L2Q9ULW6 460 aaPredicted RBP16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 A0A087WZG4 1122 aa16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 PTPDC1A2A3K4 754 aa16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 GOLIM4O00461 696 aa16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 IGSF3O75054 1194 aa16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 SNW1Q13573 536 aaKnown RBP16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 HAUS7Q99871 368 aa16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
TPM3P9-201ENST00000424846 KRT32Q14532 448 aa16.69■□□□□ 0.26
TPM3P9-201ENST00000424846 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
TPM3P9-201ENST00000424846 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
TPM3P9-201ENST00000424846 ERBB3P21860 1342 aa16.69■□□□□ 0.26
TPM3P9-201ENST00000424846 TTLL5Q6EMB2 1281 aa16.69■□□□□ 0.26
TPM3P9-201ENST00000424846 OTUD7BQ6GQQ9 843 aa16.69■□□□□ 0.26
TPM3P9-201ENST00000424846 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
TPM3P9-201ENST00000424846 NLRP2Q9NX02 1062 aa16.69■□□□□ 0.26
TPM3P9-201ENST00000424846 PFKFB2O60825 505 aa16.68■□□□□ 0.26
TPM3P9-201ENST00000424846 RABL6Q3YEC7 729 aaPredicted RBP16.68■□□□□ 0.26
TPM3P9-201ENST00000424846 ZNF592Q92610 1267 aa16.68■□□□□ 0.26
TPM3P9-201ENST00000424846 PDIA4P13667 645 aaKnown RBP16.68■□□□□ 0.26
TPM3P9-201ENST00000424846 DDX17Q92841 729 aaKnown RBP16.68■□□□□ 0.26
TPM3P9-201ENST00000424846 PHKG2P15735 406 aa16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 CASP7P55210 303 aa16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 KBTBD3Q8NAB2 608 aa16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 RCOR1Q9UKL0 485 aa16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 DMTNQ08495 405 aa16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 TPD52L1Q16890 204 aaPredicted RBP16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 FILIP1Q7Z7B0 1213 aa16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 LRRC8AQ8IWT6 810 aa16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 DHX40Q8IX18 779 aaKnown RBP16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 ZSCAN16Q9H4T2 348 aaPredicted RBP16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 GJB4Q9NTQ9 266 aa16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 SLIT3O75094 1523 aa16.67■□□□□ 0.26
TPM3P9-201ENST00000424846 DHX32Q7L7V1 743 aaKnown RBP16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 RAB11FIP4Q86YS3 637 aa16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 ENGASEQ8NFI3 743 aa16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 ZNF594Q96JF6 807 aaPredicted RBP16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 CFAP45Q9UL16 551 aa16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 ADAMTS7Q9UKP4 1686 aa16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 EXOSC10Q01780 885 aaKnown RBP16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 RAPGEF4Q8WZA2 1011 aa16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 TRMT1Q9NXH9 659 aaKnown RBP16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 V9GYY5 206 aaPredicted RBP16.66■□□□□ 0.26
TPM3P9-201ENST00000424846 MEGF6O75095 1541 aa16.65■□□□□ 0.26
TPM3P9-201ENST00000424846 E7EWF7 191 aa16.65■□□□□ 0.26
TPM3P9-201ENST00000424846 GOLGA6L19H0YKK7 550 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms