RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 TTLL11Q8NHH1 800 aa9.94□□□□□ -0.82
SCN2A-204ENST00000424833 NEUROD6Q96NK8 337 aa9.94□□□□□ -0.82
SCN2A-204ENST00000424833 CDCA7Q9BWT1 371 aaPredicted RBP9.94□□□□□ -0.82
SCN2A-204ENST00000424833 PDRG1Q9NUG6 133 aa9.94□□□□□ -0.82
SCN2A-204ENST00000424833 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
SCN2A-204ENST00000424833 THRAP3Q9Y2W1 955 aaKnown RBP9.94□□□□□ -0.82
SCN2A-204ENST00000424833 COL5A3P25940 1745 aaPredicted RBP9.94□□□□□ -0.82
SCN2A-204ENST00000424833 SH3TC1Q8TE82 1336 aa9.94□□□□□ -0.82
SCN2A-204ENST00000424833 GOLGA6L3A6NEY3 463 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 GOLIM4O00461 696 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 IL6STP40189 918 aaPredicted RBP9.93□□□□□ -0.82
SCN2A-204ENST00000424833 ITPK1Q13572 414 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 DDB1Q16531 1140 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 GPT2Q8TD30 523 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 ACSBG1Q96GR2 724 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 PANK2Q9BZ23 570 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 GREM2Q9H772 168 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 PAG1Q9NWQ8 432 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 TPCN1Q9ULQ1 816 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 CYP46A1Q9Y6A2 500 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 NUTM2BA6NNL0 878 aaPredicted RBP9.93□□□□□ -0.82
SCN2A-204ENST00000424833 NUTM2EB1AL46 878 aaPredicted RBP9.93□□□□□ -0.82
SCN2A-204ENST00000424833 ERVV-1B6SEH8 477 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 GOLGA6L22H0YM25 854 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 ZKSCAN1P17029 563 aaPredicted RBP9.93□□□□□ -0.82
SCN2A-204ENST00000424833 EIF5P55010 431 aaKnown RBP9.93□□□□□ -0.82
SCN2A-204ENST00000424833 CTSWP56202 376 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 FGD1P98174 961 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 SCARF1Q14162 830 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 ME3Q16798 604 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 CCDC57Q2TAC2 916 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 DZIP3Q86Y13 1208 aaKnown RBP9.93□□□□□ -0.82
SCN2A-204ENST00000424833 NUTM2AQ8IVF1 878 aaPredicted RBP9.93□□□□□ -0.82
SCN2A-204ENST00000424833 ZNF34Q8IZ26 560 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 TCEANC2Q96MN5 208 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 NSFL1CQ9UNZ2 370 aaKnown RBP9.93□□□□□ -0.82
SCN2A-204ENST00000424833 RIPOR2Q9Y4F9 1068 aa9.93□□□□□ -0.82
SCN2A-204ENST00000424833 DDX60Q8IY21 1712 aaKnown RBP9.92□□□□□ -0.82
SCN2A-204ENST00000424833 COL4A1P02462 1669 aa9.92□□□□□ -0.82
SCN2A-204ENST00000424833 LAMA4Q16363 1823 aa9.92□□□□□ -0.82
SCN2A-204ENST00000424833 AKAP11Q9UKA4 1901 aa9.92□□□□□ -0.82
SCN2A-204ENST00000424833 PRPF40AO75400 957 aaKnown RBP9.92□□□□□ -0.82
SCN2A-204ENST00000424833 KCNJ4P48050 445 aa9.92□□□□□ -0.82
SCN2A-204ENST00000424833 TOB2Q14106 344 aaPredicted RBP9.92□□□□□ -0.82
SCN2A-204ENST00000424833 MCMDC2Q4G0Z9 681 aa9.92□□□□□ -0.82
SCN2A-204ENST00000424833 ZMYM1Q5SVZ6 1142 aa9.92□□□□□ -0.82
SCN2A-204ENST00000424833 BARGINQ6ZT62 677 aa9.92□□□□□ -0.82
SCN2A-204ENST00000424833 VGLL2Q8N8G2 317 aa9.92□□□□□ -0.82
SCN2A-204ENST00000424833 CEP126Q9P2H0 1117 aa9.92□□□□□ -0.82
SCN2A-204ENST00000424833 DDX49Q9Y6V7 483 aaKnown RBP9.92□□□□□ -0.82
SCN2A-204ENST00000424833 MAST3O60307 1309 aa9.92□□□□□ -0.82
SCN2A-204ENST00000424833 ARAP2Q8WZ64 1704 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 A0A0G2JLW4 131 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 IRS4O14654 1257 aaPredicted RBP9.91□□□□□ -0.82
SCN2A-204ENST00000424833 FOXP2O15409 715 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 CYP21A2P08686 494 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 ITGA6P23229 1130 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 RPS6KB1P23443 525 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 CRKLP46109 303 aaKnown RBP9.91□□□□□ -0.82
SCN2A-204ENST00000424833 IFIT5Q13325 482 aaKnown RBP9.91□□□□□ -0.82
SCN2A-204ENST00000424833 HSP90AB3PQ58FF7 597 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 L1TD1Q5T7N2 865 aaKnown RBP9.91□□□□□ -0.82
SCN2A-204ENST00000424833 STOX1Q6ZVD7 989 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 CCDC83Q8IWF9 413 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.91□□□□□ -0.82
SCN2A-204ENST00000424833 XAGE2Q96GT9 111 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 HMG20BQ9P0W2 317 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 BCORQ6W2J9 1755 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 BCL9LQ86UU0 1499 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 ZNF831Q5JPB2 1677 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 LOC102724428A0A0B4J2F2 783 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 KCNQ2O43526 872 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 IFIT1P09914 478 aaKnown RBP9.91□□□□□ -0.82
SCN2A-204ENST00000424833 SYT1P21579 422 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 SIK1P57059 783 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 PIP4K2BP78356 416 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 PI16Q6UXB8 463 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 NECAB1Q8N987 351 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 ALDH8A1Q9H2A2 487 aaPredicted RBP9.91□□□□□ -0.82
SCN2A-204ENST00000424833 CCDC87Q9NVE4 849 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 TRMT112Q9UI30 125 aaKnown RBP9.91□□□□□ -0.82
SCN2A-204ENST00000424833 LAMB2P55268 1798 aa9.91□□□□□ -0.82
SCN2A-204ENST00000424833 M0R2C6 588 aa9.9□□□□□ -0.82
SCN2A-204ENST00000424833 NPM3O75607 178 aaKnown RBP9.9□□□□□ -0.82
SCN2A-204ENST00000424833 CAMTA2O94983 1202 aa9.9□□□□□ -0.82
SCN2A-204ENST00000424833 PSMA5P28066 241 aa9.9□□□□□ -0.82
SCN2A-204ENST00000424833 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
SCN2A-204ENST00000424833 BLOC1S2Q6QNY1 142 aa9.9□□□□□ -0.82
SCN2A-204ENST00000424833 GRPEL1Q9HAV7 217 aa9.9□□□□□ -0.82
SCN2A-204ENST00000424833 SH2B1Q9NRF2 756 aaPredicted RBP9.9□□□□□ -0.82
SCN2A-204ENST00000424833 HELLSQ9NRZ9 838 aa9.9□□□□□ -0.82
SCN2A-204ENST00000424833 RBM27Q9P2N5 1060 aaKnown RBP9.9□□□□□ -0.82
SCN2A-204ENST00000424833 U3KPZ7 1027 aaPredicted RBP9.9□□□□□ -0.82
SCN2A-204ENST00000424833 WDR33Q9C0J8 1336 aaKnown RBP9.9□□□□□ -0.83
SCN2A-204ENST00000424833 MYH7P12883 1935 aa9.89□□□□□ -0.83
SCN2A-204ENST00000424833 RNF113AO15541 343 aaKnown RBP9.89□□□□□ -0.83
SCN2A-204ENST00000424833 GJB2P29033 226 aa9.89□□□□□ -0.83
SCN2A-204ENST00000424833 ATP6V1AP38606 617 aa9.89□□□□□ -0.83
SCN2A-204ENST00000424833 ZSCAN23Q3MJ62 389 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms