RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CKAP2LQ8IYA6 745 aa14.22□□□□□ -0.13
PTPRN-204ENST00000423636 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
PTPRN-204ENST00000423636 XAGE2Q96GT9 111 aa14.22□□□□□ -0.13
PTPRN-204ENST00000423636 SOS2Q07890 1332 aaPredicted RBP14.22□□□□□ -0.13
PTPRN-204ENST00000423636 EYA2O00167 538 aa14.21□□□□□ -0.13
PTPRN-204ENST00000423636 IDH1O75874 414 aaKnown RBP14.21□□□□□ -0.13
PTPRN-204ENST00000423636 F13A1P00488 732 aa14.21□□□□□ -0.13
PTPRN-204ENST00000423636 ATP5JP18859 108 aa14.21□□□□□ -0.13
PTPRN-204ENST00000423636 BCL11BQ9C0K0 894 aaPredicted RBP14.21□□□□□ -0.13
PTPRN-204ENST00000423636 SEC31BQ9NQW1 1179 aa14.21□□□□□ -0.13
PTPRN-204ENST00000423636 OSBP2Q969R2 916 aa14.21□□□□□ -0.13
PTPRN-204ENST00000423636 MTMR6Q9Y217 621 aa14.21□□□□□ -0.13
PTPRN-204ENST00000423636 COL5A2P05997 1499 aaPredicted RBP14.21□□□□□ -0.13
PTPRN-204ENST00000423636 EXOC5O00471 708 aa14.21□□□□□ -0.14
PTPRN-204ENST00000423636 ITGA6P23229 1130 aa14.21□□□□□ -0.14
PTPRN-204ENST00000423636 SLC51AQ86UW1 340 aa14.21□□□□□ -0.14
PTPRN-204ENST00000423636 ANP32BQ92688 251 aaKnown RBP14.21□□□□□ -0.14
PTPRN-204ENST00000423636 NEK1Q96PY6 1258 aa14.21□□□□□ -0.14
PTPRN-204ENST00000423636 JAG2Q9Y219 1238 aa14.21□□□□□ -0.14
PTPRN-204ENST00000423636 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.21□□□□□ -0.14
PTPRN-204ENST00000423636 OVOS2A0A0G2JMS6 1433 aa14.2□□□□□ -0.14
PTPRN-204ENST00000423636 TCIRG1Q13488 830 aa14.2□□□□□ -0.14
PTPRN-204ENST00000423636 SLC4A8Q2Y0W8 1093 aa14.2□□□□□ -0.14
PTPRN-204ENST00000423636 MCMDC2Q4G0Z9 681 aa14.2□□□□□ -0.14
PTPRN-204ENST00000423636 ALS2Q96Q42 1657 aa14.2□□□□□ -0.14
PTPRN-204ENST00000423636 ESPNB1AK53 854 aa14.2□□□□□ -0.14
PTPRN-204ENST00000423636 ERVV-2B6SEH9 535 aa14.2□□□□□ -0.14
PTPRN-204ENST00000423636 RPS6KB1P23443 525 aa14.2□□□□□ -0.14
PTPRN-204ENST00000423636 IFIT5Q13325 482 aaKnown RBP14.2□□□□□ -0.14
PTPRN-204ENST00000423636 RABL6Q3YEC7 729 aaPredicted RBP14.2□□□□□ -0.14
PTPRN-204ENST00000423636 FAM43AQ8N2R8 423 aa14.2□□□□□ -0.14
PTPRN-204ENST00000423636 USP42Q9H9J4 1324 aaKnown RBP14.2□□□□□ -0.14
PTPRN-204ENST00000423636 ARID3AQ99856 593 aa14.2□□□□□ -0.14
PTPRN-204ENST00000423636 PUS7LQ9H0K6 701 aaKnown RBP14.2□□□□□ -0.14
PTPRN-204ENST00000423636 C17orf53Q8N3J3 647 aaPredicted RBP14.19□□□□□ -0.14
PTPRN-204ENST00000423636 INTS4Q96HW7 963 aaKnown RBP14.19□□□□□ -0.14
PTPRN-204ENST00000423636 HAUS7Q99871 368 aa14.19□□□□□ -0.14
PTPRN-204ENST00000423636 IRS4O14654 1257 aaPredicted RBP14.18□□□□□ -0.14
PTPRN-204ENST00000423636 RNF20Q5VTR2 975 aa14.18□□□□□ -0.14
PTPRN-204ENST00000423636 DZIP3Q86Y13 1208 aaKnown RBP14.18□□□□□ -0.14
PTPRN-204ENST00000423636 USP25Q9UHP3 1055 aa14.18□□□□□ -0.14
PTPRN-204ENST00000423636 STARD3NLO95772 234 aa14.18□□□□□ -0.14
PTPRN-204ENST00000423636 CCDC82Q8N4S0 544 aa14.18□□□□□ -0.14
PTPRN-204ENST00000423636 KBTBD3Q8NAB2 608 aa14.18□□□□□ -0.14
PTPRN-204ENST00000423636 ATP6V1AP38606 617 aa14.18□□□□□ -0.14
PTPRN-204ENST00000423636 CCDC191Q8NCU4 936 aa14.18□□□□□ -0.14
PTPRN-204ENST00000423636 MAST3O60307 1309 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 PTMAP06454 111 aaKnown RBP14.17□□□□□ -0.14
PTPRN-204ENST00000423636 HSPD1P10809 573 aaKnown RBP14.17□□□□□ -0.14
PTPRN-204ENST00000423636 LIG1P18858 919 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 SCN11AQ9UI33 1791 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 CLEC17AQ6ZS10 378 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 TTC6Q86TZ1 520 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 H3BQV1 296 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 SMIM22K7EJ46 135 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 IL15P40933 162 aaPredicted RBP14.17□□□□□ -0.14
PTPRN-204ENST00000423636 PHKA1P46020 1223 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 SCRN1Q12765 414 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 IFFO2Q5TF58 517 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 LRSAM1Q6UWE0 723 aa14.17□□□□□ -0.14
PTPRN-204ENST00000423636 UBE2Q2LH0YL09 131 aa14.16□□□□□ -0.14
PTPRN-204ENST00000423636 MYL10Q9BUA6 226 aa14.16□□□□□ -0.14
PTPRN-204ENST00000423636 TUBGCP6Q96RT7 1819 aa14.16□□□□□ -0.14
PTPRN-204ENST00000423636 COL18A1P39060 1754 aa14.16□□□□□ -0.14
PTPRN-204ENST00000423636 PSMA5P28066 241 aa14.16□□□□□ -0.14
PTPRN-204ENST00000423636 NLRP10Q86W26 655 aa14.16□□□□□ -0.14
PTPRN-204ENST00000423636 SPC24Q8NBT2 197 aa14.16□□□□□ -0.14
PTPRN-204ENST00000423636 TOMM22Q9NS69 142 aa14.16□□□□□ -0.14
PTPRN-204ENST00000423636 AFDNP55196 1824 aaKnown RBP14.16□□□□□ -0.14
PTPRN-204ENST00000423636 FAM98CQ17RN3 349 aaKnown RBP14.15□□□□□ -0.14
PTPRN-204ENST00000423636 CCDC158Q5M9N0 1113 aa14.15□□□□□ -0.14
PTPRN-204ENST00000423636 FAM184AQ8NB25 1140 aa14.15□□□□□ -0.14
PTPRN-204ENST00000423636 PHRF1Q9P1Y6 1649 aaKnown RBP14.15□□□□□ -0.14
PTPRN-204ENST00000423636 MCAMP43121 646 aa14.15□□□□□ -0.14
PTPRN-204ENST00000423636 CPDO75976 1380 aa14.15□□□□□ -0.14
PTPRN-204ENST00000423636 CYP19A1P11511 503 aaPredicted RBP14.15□□□□□ -0.14
PTPRN-204ENST00000423636 ATP2B3Q16720 1220 aa14.15□□□□□ -0.14
PTPRN-204ENST00000423636 TTLL11Q8NHH1 800 aa14.15□□□□□ -0.14
PTPRN-204ENST00000423636 USP54Q70EL1 1684 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 MED23Q9ULK4 1368 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 UBN2Q6ZU65 1347 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 HIP1O00291 1037 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 POLR3DP05423 398 aaPredicted RBP14.14□□□□□ -0.15
PTPRN-204ENST00000423636 ZNF445P59923 1031 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 RRP12Q5JTH9 1297 aaKnown RBP14.14□□□□□ -0.15
PTPRN-204ENST00000423636 SLC9C2Q5TAH2 1124 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 TSPY26PQ9H489 355 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 E7EWF7 191 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 MIGA1Q8NAN2 632 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 ZKSCAN3Q9BRR0 538 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 ISCA1Q9BUE6 129 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 SENP2Q9HC62 589 aa14.14□□□□□ -0.15
PTPRN-204ENST00000423636 GOLGA6L4A6NEF3 574 aa14.13□□□□□ -0.15
PTPRN-204ENST00000423636 SUSD4Q5VX71 490 aa14.13□□□□□ -0.15
PTPRN-204ENST00000423636 C8orf37Q96NL8 207 aa14.13□□□□□ -0.15
PTPRN-204ENST00000423636 FGAP02671 866 aa14.13□□□□□ -0.15
PTPRN-204ENST00000423636 DDB1Q16531 1140 aa14.13□□□□□ -0.15
PTPRN-204ENST00000423636 CMTR1Q8N1G2 835 aaKnown RBP14.13□□□□□ -0.15
PTPRN-204ENST00000423636 AIFM3Q96NN9 605 aa14.13□□□□□ -0.15
PTPRN-204ENST00000423636 SIPA1L3O60292 1781 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms