RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 PNISRQ8TF01 805 aaKnown RBP9.42□□□□□ -0.9
RFX3-205ENST00000420720 ZNF277Q9NRM2 450 aaPredicted RBP9.42□□□□□ -0.9
RFX3-205ENST00000420720 ANKRD31Q8N7Z5 1873 aa9.41□□□□□ -0.9
RFX3-205ENST00000420720 MYL6BP14649 208 aa9.41□□□□□ -0.9
RFX3-205ENST00000420720 ALDH1B1P30837 517 aa9.41□□□□□ -0.9
RFX3-205ENST00000420720 EIF4A1P60842 406 aaKnown RBP9.41□□□□□ -0.9
RFX3-205ENST00000420720 TTLL7Q6ZT98 887 aa9.41□□□□□ -0.9
RFX3-205ENST00000420720 CTU1Q7Z7A3 348 aaKnown RBP9.41□□□□□ -0.9
RFX3-205ENST00000420720 NUTM1Q86Y26 1132 aa9.41□□□□□ -0.9
RFX3-205ENST00000420720 THUMPD2Q9BTF0 503 aaKnown RBP9.41□□□□□ -0.9
RFX3-205ENST00000420720 SIPA1L3O60292 1781 aaPredicted RBP9.41□□□□□ -0.9
RFX3-205ENST00000420720 GPTP24298 496 aa9.4□□□□□ -0.9
RFX3-205ENST00000420720 IARSP41252 1262 aaKnown RBP9.4□□□□□ -0.9
RFX3-205ENST00000420720 LSM11P83369 360 aaKnown RBP eCLIP9.4□□□□□ -0.9
RFX3-205ENST00000420720 NFE2L2Q16236 605 aa9.4□□□□□ -0.9
RFX3-205ENST00000420720 RTKN2Q8IZC4 609 aa9.4□□□□□ -0.9
RFX3-205ENST00000420720 SYNE4Q8N205 404 aa9.4□□□□□ -0.9
RFX3-205ENST00000420720 PLEKHF1Q96S99 279 aa9.4□□□□□ -0.9
RFX3-205ENST00000420720 ZBTB3Q9H5J0 574 aa9.4□□□□□ -0.9
RFX3-205ENST00000420720 SPTBN5Q9NRC6 3674 aaKnown RBP9.4□□□□□ -0.9
RFX3-205ENST00000420720 CENPFP49454 3210 aa9.39□□□□□ -0.91
RFX3-205ENST00000420720 ABCC12Q96J65 1359 aa9.39□□□□□ -0.91
RFX3-205ENST00000420720 MAP3K15Q6ZN16 1313 aa9.39□□□□□ -0.91
RFX3-205ENST00000420720 ERVV-1B6SEH8 477 aa9.39□□□□□ -0.91
RFX3-205ENST00000420720 KIF6Q6ZMV9 814 aa9.39□□□□□ -0.91
RFX3-205ENST00000420720 HHIPL1Q96JK4 782 aa9.39□□□□□ -0.91
RFX3-205ENST00000420720 NYXQ9GZU5 481 aa9.39□□□□□ -0.91
RFX3-205ENST00000420720 VCANP13611 3396 aa9.38□□□□□ -0.91
RFX3-205ENST00000420720 SLX4Q8IY92 1834 aa9.38□□□□□ -0.91
RFX3-205ENST00000420720 TCERG1O14776 1098 aaKnown RBP9.38□□□□□ -0.91
RFX3-205ENST00000420720 SUSD4Q5VX71 490 aa9.38□□□□□ -0.91
RFX3-205ENST00000420720 SAGE1Q9NXZ1 904 aa9.38□□□□□ -0.91
RFX3-205ENST00000420720 UBN2Q6ZU65 1347 aa9.37□□□□□ -0.91
RFX3-205ENST00000420720 MAPK8IP3Q9UPT6 1336 aa9.37□□□□□ -0.91
RFX3-205ENST00000420720 CACNA1SQ13698 1873 aa9.37□□□□□ -0.91
RFX3-205ENST00000420720 FZD9O00144 591 aa9.37□□□□□ -0.91
RFX3-205ENST00000420720 EIF2S2P20042 333 aaKnown RBP9.37□□□□□ -0.91
RFX3-205ENST00000420720 CRY2Q49AN0 593 aa9.37□□□□□ -0.91
RFX3-205ENST00000420720 SLC51AQ86UW1 340 aa9.37□□□□□ -0.91
RFX3-205ENST00000420720 RPGRQ92834 1020 aaKnown RBP9.37□□□□□ -0.91
RFX3-205ENST00000420720 PNNQ9H307 717 aaKnown RBP9.37□□□□□ -0.91
RFX3-205ENST00000420720 TSPYL4Q9UJ04 414 aa9.37□□□□□ -0.91
RFX3-205ENST00000420720 BCORQ6W2J9 1755 aa9.37□□□□□ -0.91
RFX3-205ENST00000420720 CELF2O95319 508 aaKnown RBP9.36□□□□□ -0.91
RFX3-205ENST00000420720 ANXA1P04083 346 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 HOXA10P31260 410 aaPredicted RBP9.36□□□□□ -0.91
RFX3-205ENST00000420720 RIPK4P57078 832 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 NOGQ13253 232 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 CC2D2BQ6DHV5 1058 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 GIGYF2Q6Y7W6 1299 aaKnown RBP9.36□□□□□ -0.91
RFX3-205ENST00000420720 ANKRD13DQ6ZTN6 518 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 ZNF34Q8IZ26 560 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 MPNDQ8N594 471 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 JDP2Q8WYK2 163 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 RBM17Q96I25 401 aaKnown RBP9.36□□□□□ -0.91
RFX3-205ENST00000420720 PSMD1Q99460 953 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 COL25A1Q9BXS0 654 aaPredicted RBP9.36□□□□□ -0.91
RFX3-205ENST00000420720 RNF186Q9NXI6 227 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 GJA3Q9Y6H8 435 aa9.36□□□□□ -0.91
RFX3-205ENST00000420720 FAM155AB1AL88 458 aaPredicted RBP9.35□□□□□ -0.91
RFX3-205ENST00000420720 PPEF1O14829 653 aaPredicted RBP9.35□□□□□ -0.91
RFX3-205ENST00000420720 TRPA1O75762 1119 aa9.35□□□□□ -0.91
RFX3-205ENST00000420720 NTSR2O95665 410 aa9.35□□□□□ -0.91
RFX3-205ENST00000420720 EIF6P56537 245 aaKnown RBP9.35□□□□□ -0.91
RFX3-205ENST00000420720 FOXK1P85037 733 aa9.35□□□□□ -0.91
RFX3-205ENST00000420720 DSG2Q14126 1118 aa9.35□□□□□ -0.91
RFX3-205ENST00000420720 PPP1R42Q7Z4L9 355 aa9.35□□□□□ -0.91
RFX3-205ENST00000420720 GPC2Q8N158 579 aa9.35□□□□□ -0.91
RFX3-205ENST00000420720 ARFGEF2Q9Y6D5 1785 aa9.35□□□□□ -0.91
RFX3-205ENST00000420720 LAMA3Q16787 3333 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 CEP290O15078 2479 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 ERBB4Q15303 1308 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 SNED1Q8TER0 1413 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 EPS15P42566 896 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 PDIA6Q15084 440 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 PROSER3Q2NL68 480 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 LRP10Q7Z4F1 713 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 PLPP6Q8IY26 295 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 PTCD2Q8WV60 388 aaKnown RBP9.34□□□□□ -0.91
RFX3-205ENST00000420720 NECTIN2Q92692 538 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 NLRP3Q96P20 1036 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 CRAMP1Q96RY5 1269 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 COL4A5P29400 1685 aa9.34□□□□□ -0.91
RFX3-205ENST00000420720 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
RFX3-205ENST00000420720 PBX2P40425 430 aa9.33□□□□□ -0.92
RFX3-205ENST00000420720 TMPOP42166 694 aaKnown RBP9.33□□□□□ -0.92
RFX3-205ENST00000420720 SCNN1DP51172 638 aa9.33□□□□□ -0.92
RFX3-205ENST00000420720 AIMP1Q12904 312 aaKnown RBP9.33□□□□□ -0.92
RFX3-205ENST00000420720 PARP10Q53GL7 1025 aa9.33□□□□□ -0.92
RFX3-205ENST00000420720 COPS6Q7L5N1 327 aa9.33□□□□□ -0.92
RFX3-205ENST00000420720 UTP14AQ9BVJ6 771 aaKnown RBP9.33□□□□□ -0.92
RFX3-205ENST00000420720 GPHNQ9NQX3 736 aaPredicted RBP9.33□□□□□ -0.92
RFX3-205ENST00000420720 IBTKQ9P2D0 1353 aaPredicted RBP9.33□□□□□ -0.92
RFX3-205ENST00000420720 PAPPA2Q9BXP8 1791 aa9.32□□□□□ -0.92
RFX3-205ENST00000420720 RIC1Q4ADV7 1423 aa9.32□□□□□ -0.92
RFX3-205ENST00000420720 PPIP5K2O43314 1243 aa9.32□□□□□ -0.92
RFX3-205ENST00000420720 KIF23Q02241 960 aaPredicted RBP9.32□□□□□ -0.92
RFX3-205ENST00000420720 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
RFX3-205ENST00000420720 PKN2Q16513 984 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms