RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
SDCBPP3-201ENST00000419629 ETFBKMTQ8IXQ9 262 aa6.78□□□□□ -1.32
SDCBPP3-201ENST00000419629 FAM26DQ5JW98 314 aa6.77□□□□□ -1.33
SDCBPP3-201ENST00000419629 PCMTD2Q9NV79 361 aa6.77□□□□□ -1.33
SDCBPP3-201ENST00000419629 SSTR4P31391 388 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 CD97P48960 835 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 CDCA8Q53HL2 280 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 MCTP1Q6DN14 999 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 NLRP13Q86W25 1043 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 AGGF1Q8N302 714 aaeCLIP6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 DCAF11Q8TEB1 546 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 PRIMPOLQ96LW4 560 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 SAP130Q9H0E3 1048 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 MUC3BQ9H195 1237 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 RBSNQ9H1K0 784 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 GTF3C3Q9Y5Q9 886 aa6.76□□□□□ -1.33
SDCBPP3-201ENST00000419629 RFX1P22670 979 aa6.75□□□□□ -1.33
SDCBPP3-201ENST00000419629 OCLNQ16625 522 aa6.75□□□□□ -1.33
SDCBPP3-201ENST00000419629 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.75□□□□□ -1.33
SDCBPP3-201ENST00000419629 CACTIN-AS1Q8N1I8 211 aa6.75□□□□□ -1.33
SDCBPP3-201ENST00000419629 GALNT11Q8NCW6 608 aa6.75□□□□□ -1.33
SDCBPP3-201ENST00000419629 UBL7Q96S82 380 aaPredicted RBP6.75□□□□□ -1.33
SDCBPP3-201ENST00000419629 NOVA2Q9UNW9 492 aaKnown RBP6.75□□□□□ -1.33
SDCBPP3-201ENST00000419629 PPME1Q9Y570 386 aa6.75□□□□□ -1.33
SDCBPP3-201ENST00000419629 TM4SF5O14894 197 aa6.74□□□□□ -1.33
SDCBPP3-201ENST00000419629 MED26O95402 600 aa6.74□□□□□ -1.33
SDCBPP3-201ENST00000419629 GLB1P16278 677 aa6.74□□□□□ -1.33
SDCBPP3-201ENST00000419629 FAM69CQ0P6D2 419 aa6.74□□□□□ -1.33
SDCBPP3-201ENST00000419629 SWI5Q1ZZU3 235 aa6.74□□□□□ -1.33
SDCBPP3-201ENST00000419629 COL13A1Q5TAT6 717 aaPredicted RBP6.74□□□□□ -1.33
SDCBPP3-201ENST00000419629 OR13H1Q8NG92 308 aa6.74□□□□□ -1.33
SDCBPP3-201ENST00000419629 RAXQ9Y2V3 346 aa6.74□□□□□ -1.33
SDCBPP3-201ENST00000419629 ACIN1Q9UKV3 1341 aaKnown RBP6.74□□□□□ -1.33
SDCBPP3-201ENST00000419629 COL17A1Q9UMD9 1497 aaPredicted RBP6.73□□□□□ -1.33
SDCBPP3-201ENST00000419629 PRMT3O60678 531 aa6.73□□□□□ -1.33
SDCBPP3-201ENST00000419629 WISP1O95388 367 aa6.73□□□□□ -1.33
SDCBPP3-201ENST00000419629 BRD2P25440 801 aaKnown RBP6.73□□□□□ -1.33
SDCBPP3-201ENST00000419629 C16orf46Q6P387 395 aa6.73□□□□□ -1.33
SDCBPP3-201ENST00000419629 GOLGA2P5Q9HBQ8 144 aa6.73□□□□□ -1.33
SDCBPP3-201ENST00000419629 UBAP1LF5GYI3 381 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 LINC01387J3KSC0 135 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 TNFRSF10BO14763 440 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 IGLV1-40P01703 118 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 CD68P34810 354 aaPredicted RBP6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 ATP11AP98196 1134 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 ADAMTSL4Q6UY14 1074 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 CAPN12Q6ZSI9 719 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 ERICH6Q7L0X2 663 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 ARMC10Q8N2F6 343 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 PIK3R5Q8WYR1 880 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 COL26A1Q96A83 441 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 KCNK4Q9NYG8 393 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 STOML1Q9UBI4 398 aa6.72□□□□□ -1.33
SDCBPP3-201ENST00000419629 GSC2O15499 205 aa6.71□□□□□ -1.34
SDCBPP3-201ENST00000419629 ZNF777Q9ULD5 760 aaPredicted RBP6.71□□□□□ -1.34
SDCBPP3-201ENST00000419629 ZMIZ1Q9ULJ6 1067 aa6.71□□□□□ -1.34
SDCBPP3-201ENST00000419629 KIAA1324LA8MWY0 1029 aaPredicted RBP6.7□□□□□ -1.34
SDCBPP3-201ENST00000419629 PTCD1O75127 700 aaKnown RBP6.7□□□□□ -1.34
SDCBPP3-201ENST00000419629 TGFB1P01137 390 aa6.7□□□□□ -1.34
SDCBPP3-201ENST00000419629 HYAL2Q12891 473 aa6.7□□□□□ -1.34
SDCBPP3-201ENST00000419629 ELOAQ14241 798 aaKnown RBP6.7□□□□□ -1.34
SDCBPP3-201ENST00000419629 CEP135Q66GS9 1140 aa6.7□□□□□ -1.34
SDCBPP3-201ENST00000419629 TXNDC11Q6PKC3 985 aa6.7□□□□□ -1.34
SDCBPP3-201ENST00000419629 LACRTQ9GZZ8 138 aa6.7□□□□□ -1.34
SDCBPP3-201ENST00000419629 DHX15O43143 795 aaKnown RBP6.69□□□□□ -1.34
SDCBPP3-201ENST00000419629 COBLO75128 1261 aa6.69□□□□□ -1.34
SDCBPP3-201ENST00000419629 CDC27P30260 824 aa6.69□□□□□ -1.34
SDCBPP3-201ENST00000419629 KIAA1211Q6ZU35 1233 aa6.69□□□□□ -1.34
SDCBPP3-201ENST00000419629 ZDHHC13Q8IUH4 622 aa6.69□□□□□ -1.34
SDCBPP3-201ENST00000419629 FAM46AQ96IP4 442 aaKnown RBP6.69□□□□□ -1.34
SDCBPP3-201ENST00000419629 RASSF4Q9H2L5 321 aa6.69□□□□□ -1.34
SDCBPP3-201ENST00000419629 FAM13BQ9NYF5 915 aa6.69□□□□□ -1.34
SDCBPP3-201ENST00000419629 FSCN2O14926 492 aa6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 ZBTB39O15060 712 aa6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 SMNDC1O75940 238 aaKnown RBP eCLIP6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 KIF4AO95239 1232 aa6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 ZAP70P43403 619 aa6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 TTC39BQ5VTQ0 682 aaPredicted RBP6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 ACAD11Q709F0 780 aa6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 STK32AQ8WU08 396 aa6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 SPACA7Q96KW9 195 aa6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 CEP41Q9BYV8 373 aa6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 CXXC1Q9P0U4 656 aaPredicted RBP6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 FNDC3AQ9Y2H6 1198 aaKnown RBP6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 OAS3Q9Y6K5 1087 aaKnown RBP6.68□□□□□ -1.34
SDCBPP3-201ENST00000419629 CYP2E1P05181 493 aaPredicted RBP6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 EPHA1P21709 976 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 CDC25BP30305 580 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 SCNN1AP37088 669 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 SRPK2P78362 688 aaKnown RBP6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 NFIAQ12857 509 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 NAA30Q147X3 362 aaPredicted RBP6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 UVSSAQ2YD98 709 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 TRIM42Q8IWZ5 723 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 CEP120Q8N960 986 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 KLHL23Q8NBE8 558 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 GPR152Q8TDT2 470 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 CARD10Q9BWT7 1032 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms