RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 GCKRQ14397 625 aa15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 ANKRD13DQ6ZTN6 518 aa15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 TDRD7Q8NHU6 1098 aaKnown RBP15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 BOLA2Q9H3K6 86 aa15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 MED23Q9ULK4 1368 aa15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 UTYO14607 1347 aa15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 COL9A3Q14050 684 aaPredicted RBP15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 TOB2Q14106 344 aaPredicted RBP15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 ATP2B3Q16720 1220 aa15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 LRP10Q7Z4F1 713 aa15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 ZNF165P49910 485 aa15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 PLA2G4DQ86XP0 818 aa15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 METTL22Q9BUU2 404 aaPredicted RBP15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 LRMPQ12912 555 aa15.1■□□□□ 0.01
LRRTM1-205ENST00000417012 C16orf45Q96MC5 204 aaPredicted RBP15.1■□□□□ 0.01
LRRTM1-205ENST00000417012 KRT32Q14532 448 aa15.1■□□□□ 0.01
LRRTM1-205ENST00000417012 ZSCAN25Q6NSZ9 544 aa15.1■□□□□ 0.01
LRRTM1-205ENST00000417012 TOM1L2Q6ZVM7 507 aa15.1■□□□□ 0.01
LRRTM1-205ENST00000417012 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
LRRTM1-205ENST00000417012 PRDM11Q9NQV5 511 aa15.1■□□□□ 0.01
LRRTM1-205ENST00000417012 XIRP1Q702N8 1843 aaKnown RBP15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 NR1I2O75469 434 aa15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 CAVIN2O95810 425 aa15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 SMTNL1A8MU46 457 aa15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 UBE3BQ7Z3V4 1068 aa15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 GTPBP4Q9BZE4 634 aaKnown RBP15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 DNAJC25Q9H1X3 360 aa15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 CLIP2Q9UDT6 1046 aa15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 NRBP1Q9UHY1 535 aa15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 TAF6LQ9Y6J9 622 aa15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 LMTK3Q96Q04 1460 aa15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 ZHX1Q9UKY1 873 aaPredicted RBP15.09■□□□□ 0.01
LRRTM1-205ENST00000417012 H3BQV1 296 aa15.08■□□□□ 0
LRRTM1-205ENST00000417012 TNNT1P13805 278 aa15.08■□□□□ 0
LRRTM1-205ENST00000417012 TSGA10IPQ3SY00 556 aa15.08■□□□□ 0
LRRTM1-205ENST00000417012 IFFO2Q5TF58 517 aa15.08■□□□□ 0
LRRTM1-205ENST00000417012 ZNF589Q86UQ0 364 aaPredicted RBP15.08■□□□□ 0
LRRTM1-205ENST00000417012 JCADQ9P266 1359 aa15.08■□□□□ 0
LRRTM1-205ENST00000417012 GTF3C6Q969F1 213 aa15.08■□□□□ 0
LRRTM1-205ENST00000417012 PGBD1Q96JS3 809 aa15.08■□□□□ 0
LRRTM1-205ENST00000417012 SPDYE4A6NLX3 237 aa15.07■□□□□ 0
LRRTM1-205ENST00000417012 GOLGA6L19H0YKK7 550 aa15.07■□□□□ 0
LRRTM1-205ENST00000417012 U2AF2P26368 475 aaKnown RBP eCLIP15.07■□□□□ 0
LRRTM1-205ENST00000417012 BRF1Q92994 677 aa15.07■□□□□ 0
LRRTM1-205ENST00000417012 JAK2O60674 1132 aa15.07■□□□□ 0
LRRTM1-205ENST00000417012 HSP90B1P14625 803 aaKnown RBP15.07■□□□□ 0
LRRTM1-205ENST00000417012 SYCP1Q15431 976 aa15.07■□□□□ 0
LRRTM1-205ENST00000417012 STRN4Q9NRL3 753 aa15.07■□□□□ 0
LRRTM1-205ENST00000417012 CFAP45Q9UL16 551 aa15.07■□□□□ 0
LRRTM1-205ENST00000417012 PAXBP1Q9Y5B6 917 aa15.07■□□□□ 0
LRRTM1-205ENST00000417012 AFDNP55196 1824 aaKnown RBP15.06■□□□□ 0
LRRTM1-205ENST00000417012 TAF5LO75529 589 aa15.06■□□□□ 0
LRRTM1-205ENST00000417012 NCBP1Q09161 790 aaKnown RBP15.06■□□□□ 0
LRRTM1-205ENST00000417012 RESTQ13127 1097 aa15.06■□□□□ 0
LRRTM1-205ENST00000417012 ZSCAN16Q9H4T2 348 aaPredicted RBP15.06■□□□□ 0
LRRTM1-205ENST00000417012 CPDO75976 1380 aa15.06■□□□□ 0
LRRTM1-205ENST00000417012 PKD1L3Q7Z443 1732 aa15.06■□□□□ 0
LRRTM1-205ENST00000417012 CDC25BP30305 580 aa15.06■□□□□ 0
LRRTM1-205ENST00000417012 TPD52L1Q16890 204 aaPredicted RBP15.06■□□□□ 0
LRRTM1-205ENST00000417012 CCDC112Q8NEF3 446 aa15.06■□□□□ 0
LRRTM1-205ENST00000417012 NEK1Q96PY6 1258 aa15.06■□□□□ 0
LRRTM1-205ENST00000417012 A0A087WZG4 1122 aa15.06■□□□□ 0
LRRTM1-205ENST00000417012 EDC3Q96F86 508 aaKnown RBP15.06■□□□□ 0
LRRTM1-205ENST00000417012 FEZ1Q99689 392 aa15.06■□□□□ 0
LRRTM1-205ENST00000417012 NDUFB9Q9Y6M9 179 aa15.06■□□□□ 0
LRRTM1-205ENST00000417012 MRC1P22897 1456 aa15.05■□□□□ 0
LRRTM1-205ENST00000417012 NBPF26B4DH59 902 aa15.05■□□□□ 0
LRRTM1-205ENST00000417012 NBPF14Q5TI25 921 aa15.05■□□□□ 0
LRRTM1-205ENST00000417012 NBPF10Q6P3W6 841 aaKnown RBP15.05■□□□□ 0
LRRTM1-205ENST00000417012 NBPF15Q8N660 670 aa15.05■□□□□ 0
LRRTM1-205ENST00000417012 ZCRB1Q8TBF4 217 aaKnown RBP15.05■□□□□ 0
LRRTM1-205ENST00000417012 CACTINQ8WUQ7 758 aaKnown RBP15.05■□□□□ 0
LRRTM1-205ENST00000417012 SLAIN2Q9P270 581 aa15.05■□□□□ 0
LRRTM1-205ENST00000417012 ZNF335Q9H4Z2 1342 aaPredicted RBP15.05■□□□□ 0
LRRTM1-205ENST00000417012 USPL1Q5W0Q7 1092 aa15.05■□□□□ -0
LRRTM1-205ENST00000417012 CCDC9Q9Y3X0 531 aaKnown RBP15.05■□□□□ -0
LRRTM1-205ENST00000417012 WDR17Q8IZU2 1322 aa15.04■□□□□ -0
LRRTM1-205ENST00000417012 A1BGP04217 495 aa15.04■□□□□ -0
LRRTM1-205ENST00000417012 TTLL7Q6ZT98 887 aa15.04■□□□□ -0
LRRTM1-205ENST00000417012 Q6ZUG5 572 aa15.04■□□□□ -0
LRRTM1-205ENST00000417012 DDX11Q96FC9 970 aa15.04■□□□□ -0
LRRTM1-205ENST00000417012 ARFGEF2Q9Y6D5 1785 aa15.04■□□□□ -0
LRRTM1-205ENST00000417012 CTAGE5O15320 804 aa15.03■□□□□ -0
LRRTM1-205ENST00000417012 STX1AQ16623 288 aa15.03■□□□□ -0
LRRTM1-205ENST00000417012 SARM1Q6SZW1 724 aa15.03■□□□□ -0
LRRTM1-205ENST00000417012 U3KPZ7 1027 aaPredicted RBP15.03■□□□□ -0
LRRTM1-205ENST00000417012 NEMFO60524 1076 aa15.03■□□□□ -0
LRRTM1-205ENST00000417012 PTPN12Q05209 780 aaKnown RBP15.03■□□□□ -0
LRRTM1-205ENST00000417012 TFCP2Q12800 502 aa15.03■□□□□ -0
LRRTM1-205ENST00000417012 CCDC144BQ3MJ40 725 aa15.03■□□□□ -0
LRRTM1-205ENST00000417012 CCDC144CPQ8IYA2 1237 aa15.03■□□□□ -0
LRRTM1-205ENST00000417012 CGNQ9P2M7 1197 aaKnown RBP15.03■□□□□ -0
LRRTM1-205ENST00000417012 PCDH11XQ9BZA7 1347 aa15.02■□□□□ -0
LRRTM1-205ENST00000417012 PCDH11YQ9BZA8 1340 aa15.02■□□□□ -0
LRRTM1-205ENST00000417012 CHGBP05060 677 aa15.02■□□□□ -0
LRRTM1-205ENST00000417012 RFX5P48382 616 aaPredicted RBP15.02■□□□□ -0
LRRTM1-205ENST00000417012 CEBPZQ03701 1054 aaKnown RBP15.02■□□□□ -0
LRRTM1-205ENST00000417012 MRFAP1L1Q96HT8 127 aa15.02■□□□□ -0
LRRTM1-205ENST00000417012 DNAJC5Q9H3Z4 198 aa15.02■□□□□ -0
LRRTM1-205ENST00000417012 BECN2A8MW95 431 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms