RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CHCHD4Q8N4Q1 142 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 ANKRD42Q8N9B4 389 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 NGDNQ8NEJ9 315 aaKnown RBP3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 TTC8Q8TAM2 541 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 CPLX3Q8WVH0 158 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 SKA1Q96BD8 255 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 GPR101Q96P66 508 aaPredicted RBP3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 HERPUD2Q9BSE4 406 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 RBSNQ9H1K0 784 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 CAAP1Q9H8G2 361 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 STRN4Q9NRL3 753 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 CLIC5Q9NZA1 410 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 ZIM2Q9NZV7 527 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 PUF60Q9UHX1 559 aaKnown RBP3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 EVLQ9UI08 416 aaPredicted RBP3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 TAGLN3Q9UI15 199 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 PCDHGA10Q9Y5H3 936 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 USP31Q70CQ4 1352 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 WASHC2CQ9Y4E1 1318 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 KDM4FA0A1W2PPD8 638 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 SFI1A8K8P3 1242 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 GOLGA6L6A8MZA4 724 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 GIPC1O14908 333 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 ZBTB7BO15156 539 aaPredicted RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 FIBPO43427 364 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 KCNQ2O43526 872 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 ORC4O43929 436 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 DKK1O94907 266 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 RPN1P04843 607 aaKnown RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 U2AF1L5P0DN76 240 aaPredicted RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 VARSP26640 1264 aaKnown RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 GCGRP47871 477 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 NASPP49321 788 aaPredicted RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 ST13P50502 369 aaKnown RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 NFKB2Q00653 900 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 U2AF1Q01081 240 aaKnown RBP eCLIP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 MCL1Q07820 350 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 FKBP5Q13451 457 aaPredicted RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 PUM3Q15397 648 aaKnown RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 TAF1CQ15572 869 aaPredicted RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 DGKHQ86XP1 1220 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 TCEAL8Q8IYN2 117 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 IFNL2Q8IZJ0 200 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 ZNF687Q8N1G0 1237 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 PHTF2Q8N3S3 785 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 OTUD6BQ8N6M0 293 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 PTCD2Q8WV60 388 aaKnown RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 MYCBPQ99417 103 aaPredicted RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 SPON2Q9BUD6 331 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 NIF3L1Q9GZT8 377 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 NGRNQ9NPE2 291 aaKnown RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 PRKAG3Q9UGI9 489 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 USP25Q9UHP3 1055 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 FKBPLQ9UIM3 349 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 CHIC2Q9UKJ5 165 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 ACAD8Q9UKU7 415 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 HDAC9Q9UKV0 1011 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 SYNPO2Q9UMS6 1093 aa3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 V9GY48 417 aaPredicted RBP3.82□□□□□ -1.8
CTDSPL-203ENST00000416688 A0A1W2PRQ8 180 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 PABPN1LA6NDY0 278 aaKnown RBP3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 RASSF10A6NK89 507 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 M0R2N6 131 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 GPR182O15218 404 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 FOXO3O43524 673 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 DIAPH1O60610 1272 aaKnown RBP3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 RBP3P10745 1247 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 SCP2P22307 547 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 STAT3P40763 770 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 PEX19P40855 299 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 EIF1AXP47813 144 aaKnown RBP3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 RAB27AP51159 221 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 GUCY2FP51841 1108 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 NEK2P51955 445 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 PSMC1P62191 440 aaKnown RBP3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 PWP1Q13610 501 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 RASGRF1Q13972 1273 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 LRRC41Q15345 812 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 TAF11Q15544 211 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 C2orf27AQ580R0 203 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 DALRD3Q5D0E6 543 aaKnown RBP3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 FAM83BQ5T0W9 1011 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 C6orf132Q5T0Z8 1188 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 NXNQ6DKJ4 435 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 DESI1Q6ICB0 168 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 TRAF7Q6Q0C0 670 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 MMS22LQ6ZRQ5 1243 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 RPAINQ86UA6 219 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 KIAA0825Q8IV33 1275 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 PASD1Q8IV76 773 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 LSM14AQ8ND56 463 aaKnown RBP3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 VPS37AQ8NEZ2 397 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 ATL2Q8NHH9 583 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 THAP3Q8WTV1 239 aaPredicted RBP3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 HNRNPLLQ8WVV9 542 aaKnown RBP3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 RSPH1Q8WYR4 309 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 ANP32BQ92688 251 aaKnown RBP3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 CDK5RAP3Q96JB5 506 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 MPP4Q96JB8 637 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 KCNH8Q96L42 1107 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms