RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 PHKA2P46019 1235 aa11.79□□□□□ -0.52
TRA2B-204ENST00000414862 FAM50AQ14320 339 aaKnown RBP11.79□□□□□ -0.52
TRA2B-204ENST00000414862 OCLNQ16625 522 aa11.79□□□□□ -0.52
TRA2B-204ENST00000414862 C4orf17Q53FE4 359 aa11.79□□□□□ -0.52
TRA2B-204ENST00000414862 NBPF10Q6P3W6 841 aaKnown RBP11.79□□□□□ -0.52
TRA2B-204ENST00000414862 TAS1R3Q7RTX0 852 aa11.79□□□□□ -0.52
TRA2B-204ENST00000414862 ZNF295-AS1Q8N0V1 137 aa11.79□□□□□ -0.52
TRA2B-204ENST00000414862 USP21Q9UK80 565 aa11.79□□□□□ -0.52
TRA2B-204ENST00000414862 TRPC5Q9UL62 973 aaPredicted RBP11.79□□□□□ -0.52
TRA2B-204ENST00000414862 POTECB2RU33 542 aa11.78□□□□□ -0.52
TRA2B-204ENST00000414862 PSMA6P60900 246 aaKnown RBP11.78□□□□□ -0.52
TRA2B-204ENST00000414862 DDX17Q92841 729 aaKnown RBP11.78□□□□□ -0.52
TRA2B-204ENST00000414862 PTCH1Q13635 1447 aa11.77□□□□□ -0.52
TRA2B-204ENST00000414862 PDIA4P13667 645 aaKnown RBP11.77□□□□□ -0.53
TRA2B-204ENST00000414862 TEAD4Q15561 434 aa11.77□□□□□ -0.53
TRA2B-204ENST00000414862 WDR44Q5JSH3 913 aa11.77□□□□□ -0.53
TRA2B-204ENST00000414862 CXXC1Q9P0U4 656 aaPredicted RBP11.77□□□□□ -0.53
TRA2B-204ENST00000414862 E9PCH4 1651 aa11.76□□□□□ -0.53
TRA2B-204ENST00000414862 NOS2P35228 1153 aa11.76□□□□□ -0.53
TRA2B-204ENST00000414862 PLA2G4AP47712 749 aa11.76□□□□□ -0.53
TRA2B-204ENST00000414862 TRAIPQ9BWF2 469 aa11.76□□□□□ -0.53
TRA2B-204ENST00000414862 CHMP3Q9Y3E7 222 aa11.76□□□□□ -0.53
TRA2B-204ENST00000414862 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
TRA2B-204ENST00000414862 C1orf167Q5SNV9 1468 aa11.76□□□□□ -0.53
TRA2B-204ENST00000414862 NRXN3Q9Y4C0 1643 aa11.75□□□□□ -0.53
TRA2B-204ENST00000414862 SERTM1A2A2V5 107 aa11.75□□□□□ -0.53
TRA2B-204ENST00000414862 SSFA2P28290 1259 aa11.75□□□□□ -0.53
TRA2B-204ENST00000414862 ZNF326Q5BKZ1 582 aaKnown RBP11.75□□□□□ -0.53
TRA2B-204ENST00000414862 STAG2Q8N3U4 1231 aa11.75□□□□□ -0.53
TRA2B-204ENST00000414862 ZDHHC1Q8WTX9 485 aa11.75□□□□□ -0.53
TRA2B-204ENST00000414862 L3MBTL2Q969R5 705 aa11.75□□□□□ -0.53
TRA2B-204ENST00000414862 ZNF232Q9UNY5 417 aa11.75□□□□□ -0.53
TRA2B-204ENST00000414862 METP08581 1390 aa11.75□□□□□ -0.53
TRA2B-204ENST00000414862 ATRNO75882 1429 aa11.75□□□□□ -0.53
TRA2B-204ENST00000414862 IQGAP3Q86VI3 1631 aa11.75□□□□□ -0.53
TRA2B-204ENST00000414862 FOXO3O43524 673 aa11.74□□□□□ -0.53
TRA2B-204ENST00000414862 C2orf49Q9BVC5 232 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-204ENST00000414862 TIMMDC1Q9NPL8 285 aa11.74□□□□□ -0.53
TRA2B-204ENST00000414862 LOC105371045A0A1W2PR82 267 aa11.73□□□□□ -0.53
TRA2B-204ENST00000414862 NUP155O75694 1391 aa11.73□□□□□ -0.53
TRA2B-204ENST00000414862 FKBP5Q13451 457 aaPredicted RBP11.73□□□□□ -0.53
TRA2B-204ENST00000414862 NALCNQ8IZF0 1738 aa11.73□□□□□ -0.53
TRA2B-204ENST00000414862 EML1O00423 815 aa11.72□□□□□ -0.53
TRA2B-204ENST00000414862 PTSQ03393 145 aa11.72□□□□□ -0.53
TRA2B-204ENST00000414862 SH3PXD2AQ5TCZ1 1133 aa11.72□□□□□ -0.53
TRA2B-204ENST00000414862 B4GALNT3Q6L9W6 998 aa11.72□□□□□ -0.53
TRA2B-204ENST00000414862 VTI1AQ96AJ9 217 aa11.72□□□□□ -0.53
TRA2B-204ENST00000414862 AIDAQ96BJ3 306 aa11.72□□□□□ -0.53
TRA2B-204ENST00000414862 LAMC1P11047 1609 aa11.71□□□□□ -0.53
TRA2B-204ENST00000414862 ROCK1Q13464 1354 aa11.71□□□□□ -0.53
TRA2B-204ENST00000414862 PHLDB3Q6NSJ2 640 aa11.71□□□□□ -0.53
TRA2B-204ENST00000414862 MYOM2P54296 1465 aa11.7□□□□□ -0.54
TRA2B-204ENST00000414862 C1orf216Q8TAB5 229 aa11.7□□□□□ -0.54
TRA2B-204ENST00000414862 HCN4Q9Y3Q4 1203 aa11.7□□□□□ -0.54
TRA2B-204ENST00000414862 DYRK1BQ9Y463 629 aa11.7□□□□□ -0.54
TRA2B-204ENST00000414862 BLMP54132 1417 aaPredicted RBP11.69□□□□□ -0.54
TRA2B-204ENST00000414862 NPHP3Q7Z494 1330 aa11.69□□□□□ -0.54
TRA2B-204ENST00000414862 COL22A1Q8NFW1 1626 aaPredicted RBP11.69□□□□□ -0.54
TRA2B-204ENST00000414862 SENP3-EIF4A1A0A087X0R7 540 aa11.69□□□□□ -0.54
TRA2B-204ENST00000414862 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
TRA2B-204ENST00000414862 HIRAP54198 1017 aaPredicted RBP11.69□□□□□ -0.54
TRA2B-204ENST00000414862 NBPF1Q3BBV0 1214 aa11.69□□□□□ -0.54
TRA2B-204ENST00000414862 ZNF787Q6DD87 383 aa11.69□□□□□ -0.54
TRA2B-204ENST00000414862 MKNK1Q9BUB5 465 aa11.69□□□□□ -0.54
TRA2B-204ENST00000414862 BRD1O95696 1058 aa11.68□□□□□ -0.54
TRA2B-204ENST00000414862 TXLNAP40222 546 aa11.68□□□□□ -0.54
TRA2B-204ENST00000414862 ORAI2Q96SN7 254 aa11.68□□□□□ -0.54
TRA2B-204ENST00000414862 NEXMIFQ5QGS0 1516 aa11.67□□□□□ -0.54
TRA2B-204ENST00000414862 SLC35F4A4IF30 521 aa11.67□□□□□ -0.54
TRA2B-204ENST00000414862 MSX1P28360 303 aa11.67□□□□□ -0.54
TRA2B-204ENST00000414862 SCNN1AP37088 669 aa11.67□□□□□ -0.54
TRA2B-204ENST00000414862 SF3B2Q13435 895 aaKnown RBP11.67□□□□□ -0.54
TRA2B-204ENST00000414862 GAS2L1Q99501 681 aaPredicted RBP11.67□□□□□ -0.54
TRA2B-204ENST00000414862 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRA2B-204ENST00000414862 ZDHHC3Q9NYG2 299 aa11.67□□□□□ -0.54
TRA2B-204ENST00000414862 BCL9LQ86UU0 1499 aa11.67□□□□□ -0.54
TRA2B-204ENST00000414862 PRAG1Q86YV5 1406 aa11.67□□□□□ -0.54
TRA2B-204ENST00000414862 ROBO2Q9HCK4 1378 aa11.67□□□□□ -0.54
TRA2B-204ENST00000414862 SPHKAPQ2M3C7 1700 aa11.66□□□□□ -0.54
TRA2B-204ENST00000414862 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
TRA2B-204ENST00000414862 CAPN12Q6ZSI9 719 aa11.66□□□□□ -0.54
TRA2B-204ENST00000414862 ALDH16A1Q8IZ83 802 aa11.66□□□□□ -0.54
TRA2B-204ENST00000414862 CCDC155Q8N6L0 562 aa11.66□□□□□ -0.54
TRA2B-204ENST00000414862 PHACTR1Q9C0D0 580 aa11.66□□□□□ -0.54
TRA2B-204ENST00000414862 HFM1A2PYH4 1435 aa11.66□□□□□ -0.54
TRA2B-204ENST00000414862 F11P03951 625 aa11.65□□□□□ -0.54
TRA2B-204ENST00000414862 TATP17735 454 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-204ENST00000414862 COL26A1Q96A83 441 aa11.65□□□□□ -0.54
TRA2B-204ENST00000414862 GPAMQ9HCL2 828 aa11.65□□□□□ -0.54
TRA2B-204ENST00000414862 LRPPRCP42704 1394 aaKnown RBP11.65□□□□□ -0.55
TRA2B-204ENST00000414862 C1orf53Q5VUE5 145 aa11.64□□□□□ -0.55
TRA2B-204ENST00000414862 LRP5O75197 1615 aa11.64□□□□□ -0.55
TRA2B-204ENST00000414862 RALGAPBQ86X10 1494 aa11.63□□□□□ -0.55
TRA2B-204ENST00000414862 PXDNQ92626 1479 aa11.63□□□□□ -0.55
TRA2B-204ENST00000414862 CDC42BPGQ6DT37 1551 aa11.63□□□□□ -0.55
TRA2B-204ENST00000414862 ATP4AP20648 1035 aa11.63□□□□□ -0.55
TRA2B-204ENST00000414862 NAA30Q147X3 362 aaPredicted RBP11.63□□□□□ -0.55
TRA2B-204ENST00000414862 SEPT3Q9UH03 358 aa11.63□□□□□ -0.55
TRA2B-204ENST00000414862 ARID4AP29374 1257 aaPredicted RBP11.62□□□□□ -0.55
TRA2B-204ENST00000414862 ARSJQ5FYB0 599 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms