RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 KCNV2Q8TDN2 545 aa16.09■□□□□ 0.17
LINC00887-202ENST00000414120 CLCN6P51797 869 aa16.09■□□□□ 0.17
LINC00887-202ENST00000414120 ELF2Q15723 593 aa16.09■□□□□ 0.17
LINC00887-202ENST00000414120 WLSQ5T9L3 541 aa16.09■□□□□ 0.17
LINC00887-202ENST00000414120 MYLK4Q86YV6 388 aaPredicted RBP16.09■□□□□ 0.17
LINC00887-202ENST00000414120 NKTRP30414 1462 aaKnown RBP16.09■□□□□ 0.17
LINC00887-202ENST00000414120 UBAP1LF5GYI3 381 aa16.09■□□□□ 0.17
LINC00887-202ENST00000414120 ESCO1Q5FWF5 840 aa16.09■□□□□ 0.17
LINC00887-202ENST00000414120 GET4Q7L5D6 327 aaPredicted RBP16.09■□□□□ 0.17
LINC00887-202ENST00000414120 XRN1Q8IZH2 1706 aaKnown RBP16.08■□□□□ 0.16
LINC00887-202ENST00000414120 CHUKO15111 745 aa16.08■□□□□ 0.16
LINC00887-202ENST00000414120 OAS2P29728 719 aaKnown RBP16.08■□□□□ 0.16
LINC00887-202ENST00000414120 CEP135Q66GS9 1140 aa16.08■□□□□ 0.16
LINC00887-202ENST00000414120 BICD2Q8TD16 824 aa16.08■□□□□ 0.16
LINC00887-202ENST00000414120 ADAM21Q9UKJ8 722 aa16.08■□□□□ 0.16
LINC00887-202ENST00000414120 AP1G2O75843 785 aa16.08■□□□□ 0.16
LINC00887-202ENST00000414120 SLC8A3P57103 927 aa16.08■□□□□ 0.16
LINC00887-202ENST00000414120 RMDN2Q96LZ7 410 aa16.08■□□□□ 0.16
LINC00887-202ENST00000414120 SCRN1Q12765 414 aa16.07■□□□□ 0.16
LINC00887-202ENST00000414120 RCSD1Q6JBY9 416 aa16.07■□□□□ 0.16
LINC00887-202ENST00000414120 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
LINC00887-202ENST00000414120 CERKQ8TCT0 537 aa16.07■□□□□ 0.16
LINC00887-202ENST00000414120 LMCD1Q9NZU5 365 aa16.07■□□□□ 0.16
LINC00887-202ENST00000414120 ARHGEF28Q8N1W1 1705 aaKnown RBP16.07■□□□□ 0.16
LINC00887-202ENST00000414120 CPS1P31327 1500 aa16.07■□□□□ 0.16
LINC00887-202ENST00000414120 POLR3GO15318 223 aaPredicted RBP16.07■□□□□ 0.16
LINC00887-202ENST00000414120 TUBB4AP04350 444 aa16.07■□□□□ 0.16
LINC00887-202ENST00000414120 NBPF7P0C2Y1 421 aaPredicted RBP16.07■□□□□ 0.16
LINC00887-202ENST00000414120 KLHL10Q6JEL2 608 aa16.07■□□□□ 0.16
LINC00887-202ENST00000414120 CLUAP1Q96AJ1 413 aa16.07■□□□□ 0.16
LINC00887-202ENST00000414120 TRIM7Q9C029 511 aa16.07■□□□□ 0.16
LINC00887-202ENST00000414120 NUDT16Q96DE0 195 aaKnown RBP16.06■□□□□ 0.16
LINC00887-202ENST00000414120 CCDC34Q96HJ3 373 aa16.06■□□□□ 0.16
LINC00887-202ENST00000414120 ERBB3P21860 1342 aa16.06■□□□□ 0.16
LINC00887-202ENST00000414120 ADGRL3Q9HAR2 1447 aa16.06■□□□□ 0.16
LINC00887-202ENST00000414120 RTN3O95197 1032 aaPredicted RBP16.06■□□□□ 0.16
LINC00887-202ENST00000414120 LMAN1P49257 510 aa16.06■□□□□ 0.16
LINC00887-202ENST00000414120 ACBD5Q5T8D3 534 aaPredicted RBP16.06■□□□□ 0.16
LINC00887-202ENST00000414120 MFSD4BQ5TF39 518 aa16.06■□□□□ 0.16
LINC00887-202ENST00000414120 NUTM2GQ5VZR2 741 aa16.06■□□□□ 0.16
LINC00887-202ENST00000414120 KCNV1Q6PIU1 500 aa16.06■□□□□ 0.16
LINC00887-202ENST00000414120 RTF1Q92541 710 aaKnown RBP16.06■□□□□ 0.16
LINC00887-202ENST00000414120 ORAI2Q96SN7 254 aa16.06■□□□□ 0.16
LINC00887-202ENST00000414120 KCND1Q9NSA2 647 aa16.06■□□□□ 0.16
LINC00887-202ENST00000414120 RBM27Q9P2N5 1060 aaKnown RBP16.06■□□□□ 0.16
LINC00887-202ENST00000414120 TSNAXIP1Q2TAA8 658 aa16.05■□□□□ 0.16
LINC00887-202ENST00000414120 SPATA21Q7Z572 469 aa16.05■□□□□ 0.16
LINC00887-202ENST00000414120 PDRG1Q9NUG6 133 aa16.05■□□□□ 0.16
LINC00887-202ENST00000414120 DLC1Q96QB1 1528 aa16.05■□□□□ 0.16
LINC00887-202ENST00000414120 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
LINC00887-202ENST00000414120 BATF3Q9NR55 127 aa16.05■□□□□ 0.16
LINC00887-202ENST00000414120 AATKQ6ZMQ8 1374 aa16.05■□□□□ 0.16
LINC00887-202ENST00000414120 ZKSCAN2Q63HK3 967 aa16.05■□□□□ 0.16
LINC00887-202ENST00000414120 POLR3CQ9BUI4 534 aaPredicted RBP16.05■□□□□ 0.16
LINC00887-202ENST00000414120 IRX2Q9BZI1 471 aaPredicted RBP16.05■□□□□ 0.16
LINC00887-202ENST00000414120 SLC12A5Q9H2X9 1139 aa16.05■□□□□ 0.16
LINC00887-202ENST00000414120 CABP1Q9NZU7 370 aa16.05■□□□□ 0.16
LINC00887-202ENST00000414120 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
LINC00887-202ENST00000414120 IPO5O00410 1097 aaKnown RBP16.04■□□□□ 0.16
LINC00887-202ENST00000414120 PSMC1P62191 440 aaKnown RBP16.04■□□□□ 0.16
LINC00887-202ENST00000414120 SMC1AQ14683 1233 aaKnown RBP16.04■□□□□ 0.16
LINC00887-202ENST00000414120 PUS10Q3MIT2 529 aaKnown RBP16.04■□□□□ 0.16
LINC00887-202ENST00000414120 CDCA2Q69YH5 1023 aaPredicted RBP16.04■□□□□ 0.16
LINC00887-202ENST00000414120 TRIM42Q8IWZ5 723 aa16.04■□□□□ 0.16
LINC00887-202ENST00000414120 SAMD3Q8N6K7 520 aa16.04■□□□□ 0.16
LINC00887-202ENST00000414120 DDX17Q92841 729 aaKnown RBP16.04■□□□□ 0.16
LINC00887-202ENST00000414120 EXOC6BQ9Y2D4 811 aa16.04■□□□□ 0.16
LINC00887-202ENST00000414120 QRICH2Q9H0J4 1663 aa16.04■□□□□ 0.16
LINC00887-202ENST00000414120 PPFIA4O75335 1185 aa16.04■□□□□ 0.16
LINC00887-202ENST00000414120 PRPF40AO75400 957 aaKnown RBP16.04■□□□□ 0.16
LINC00887-202ENST00000414120 DEUP1Q05D60 604 aa16.04■□□□□ 0.16
LINC00887-202ENST00000414120 CACTIN-AS1Q8N1I8 211 aa16.04■□□□□ 0.16
LINC00887-202ENST00000414120 PRPF38AQ8NAV1 312 aaKnown RBP16.04■□□□□ 0.16
LINC00887-202ENST00000414120 ODF2LQ9ULJ1 636 aa16.04■□□□□ 0.16
LINC00887-202ENST00000414120 IQCB1Q15051 598 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 CCDC181Q5TID7 509 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
LINC00887-202ENST00000414120 SMCR8Q8TEV9 937 aaPredicted RBP16.03■□□□□ 0.16
LINC00887-202ENST00000414120 L2HGDHQ9H9P8 463 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 SLAIN2Q9P270 581 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.03■□□□□ 0.16
LINC00887-202ENST00000414120 PRR36Q9H6K5 1346 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 FOXO3O43524 673 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 FMNL1O95466 1100 aaPredicted RBP16.03■□□□□ 0.16
LINC00887-202ENST00000414120 GCKP35557 465 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 MIPOL1Q8TD10 442 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 BICD1Q96G01 975 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 CABS1Q96KC9 395 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 LTBP4Q8N2S1 1624 aa16.03■□□□□ 0.16
LINC00887-202ENST00000414120 ATXN2Q99700 1313 aaKnown RBP16.02■□□□□ 0.16
LINC00887-202ENST00000414120 PDLIM1O00151 329 aa16.02■□□□□ 0.16
LINC00887-202ENST00000414120 EPB41L2O43491 1005 aaKnown RBP16.02■□□□□ 0.16
LINC00887-202ENST00000414120 SAAL1Q96ER3 474 aa16.02■□□□□ 0.16
LINC00887-202ENST00000414120 C16orf45Q96MC5 204 aaPredicted RBP16.02■□□□□ 0.16
LINC00887-202ENST00000414120 TRPV5Q9NQA5 729 aa16.02■□□□□ 0.16
LINC00887-202ENST00000414120 CCDC15Q0P6D6 951 aa16.02■□□□□ 0.15
LINC00887-202ENST00000414120 IFT88Q13099 833 aa16.02■□□□□ 0.15
LINC00887-202ENST00000414120 ISM2Q6H9L7 571 aa16.02■□□□□ 0.15
LINC00887-202ENST00000414120 C3orf20Q8ND61 904 aa16.02■□□□□ 0.15
LINC00887-202ENST00000414120 TEKT1Q969V4 418 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms