RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 CSF1RP07333 972 aa12.96□□□□□ -0.33
LRRTM4-204ENST00000409884 CTSWP56202 376 aa12.96□□□□□ -0.33
LRRTM4-204ENST00000409884 TIMM10P62072 90 aa12.96□□□□□ -0.33
LRRTM4-204ENST00000409884 CCDC57Q2TAC2 916 aa12.96□□□□□ -0.33
LRRTM4-204ENST00000409884 PROM2Q8N271 834 aa12.96□□□□□ -0.33
LRRTM4-204ENST00000409884 FAM13BQ9NYF5 915 aa12.96□□□□□ -0.33
LRRTM4-204ENST00000409884 DBNLQ9UJU6 430 aaKnown RBP12.96□□□□□ -0.33
LRRTM4-204ENST00000409884 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.33
LRRTM4-204ENST00000409884 CLSTN1O94985 981 aa12.96□□□□□ -0.34
LRRTM4-204ENST00000409884 ITGA6P23229 1130 aa12.96□□□□□ -0.34
LRRTM4-204ENST00000409884 TNNI3KQ59H18 835 aa12.96□□□□□ -0.34
LRRTM4-204ENST00000409884 EDC3Q96F86 508 aaKnown RBP12.96□□□□□ -0.34
LRRTM4-204ENST00000409884 DBNDD2Q9BQY9 259 aa12.96□□□□□ -0.34
LRRTM4-204ENST00000409884 PLCD4Q9BRC7 762 aa12.96□□□□□ -0.34
LRRTM4-204ENST00000409884 UPF2Q9HAU5 1272 aaKnown RBP12.96□□□□□ -0.34
LRRTM4-204ENST00000409884 FPGT-TNNI3KV9GXZ4 949 aa12.96□□□□□ -0.34
LRRTM4-204ENST00000409884 CDHR2Q9BYE9 1310 aa12.95□□□□□ -0.34
LRRTM4-204ENST00000409884 GOLGB1Q14789 3259 aaKnown RBP12.95□□□□□ -0.34
LRRTM4-204ENST00000409884 NTSR2O95665 410 aa12.95□□□□□ -0.34
LRRTM4-204ENST00000409884 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
LRRTM4-204ENST00000409884 ZNF592Q92610 1267 aa12.95□□□□□ -0.34
LRRTM4-204ENST00000409884 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
LRRTM4-204ENST00000409884 PLA2G12BQ9BX93 195 aa12.95□□□□□ -0.34
LRRTM4-204ENST00000409884 ECHDC1Q9NTX5 307 aa12.95□□□□□ -0.34
LRRTM4-204ENST00000409884 RTCBQ9Y3I0 505 aaKnown RBP12.95□□□□□ -0.34
LRRTM4-204ENST00000409884 SH3TC1Q8TE82 1336 aa12.95□□□□□ -0.34
LRRTM4-204ENST00000409884 EYA2O00167 538 aa12.94□□□□□ -0.34
LRRTM4-204ENST00000409884 ZBTB22O15209 634 aa12.94□□□□□ -0.34
LRRTM4-204ENST00000409884 XRCC6P12956 609 aaKnown RBP eCLIP12.94□□□□□ -0.34
LRRTM4-204ENST00000409884 RXRBP28702 533 aa12.94□□□□□ -0.34
LRRTM4-204ENST00000409884 IFIT5Q13325 482 aaKnown RBP12.94□□□□□ -0.34
LRRTM4-204ENST00000409884 BOLA2Q9H3K6 86 aa12.94□□□□□ -0.34
LRRTM4-204ENST00000409884 SEC31BQ9NQW1 1179 aa12.94□□□□□ -0.34
LRRTM4-204ENST00000409884 C4BP0C0L5 1744 aa12.94□□□□□ -0.34
LRRTM4-204ENST00000409884 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
LRRTM4-204ENST00000409884 CERS3Q8IU89 383 aa12.94□□□□□ -0.34
LRRTM4-204ENST00000409884 PDE8AO60658 829 aa12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 AK7Q96M32 723 aa12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 COL4A1P02462 1669 aa12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 BCORQ6W2J9 1755 aa12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 CHGBP05060 677 aa12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 CHMLP26374 656 aa12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 MYH3P11055 1940 aa12.93□□□□□ -0.34
LRRTM4-204ENST00000409884 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 SNAP23O00161 211 aa12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 ZPR1O75312 459 aa12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 HELBQ8NG08 1087 aaPredicted RBP12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 ZNF652Q9Y2D9 606 aa12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 AOX1Q06278 1338 aa12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 TTC41PQ6P2S7 1318 aa12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 TAF1P21675 1872 aa12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 TXNRD1Q16881 649 aa12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 LDHAL6AQ6ZMR3 332 aa12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 DNAJC2Q99543 621 aaKnown RBP12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 CCDC94Q9BW85 323 aaPredicted RBP12.92□□□□□ -0.34
LRRTM4-204ENST00000409884 ADORA1P30542 326 aa12.91□□□□□ -0.34
LRRTM4-204ENST00000409884 RFC4P35249 363 aa12.91□□□□□ -0.34
LRRTM4-204ENST00000409884 PARP10Q53GL7 1025 aa12.91□□□□□ -0.34
LRRTM4-204ENST00000409884 CLEC4GQ6UXB4 293 aa12.91□□□□□ -0.34
LRRTM4-204ENST00000409884 KIF2CQ99661 725 aa12.91□□□□□ -0.34
LRRTM4-204ENST00000409884 DDX60Q8IY21 1712 aaKnown RBP12.91□□□□□ -0.34
LRRTM4-204ENST00000409884 AK9Q5TCS8 1911 aa12.91□□□□□ -0.34
LRRTM4-204ENST00000409884 ABCC12Q96J65 1359 aa12.91□□□□□ -0.34
LRRTM4-204ENST00000409884 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
LRRTM4-204ENST00000409884 A0A1B0GUL7 405 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 ANKRD18BA2A2Z9 1011 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 GOLGA6L3A6NEY3 463 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 APBA3O96018 575 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 TRIM44Q96DX7 344 aaPredicted RBP12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 ARID3AQ99856 593 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 ERC2O15083 957 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 IRX5P78411 483 aaPredicted RBP12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 ESYT1Q9BSJ8 1104 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 RIPOR2Q9Y4F9 1068 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 SCN7AQ01118 1682 aa12.9□□□□□ -0.34
LRRTM4-204ENST00000409884 RIC1Q4ADV7 1423 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 WTIPA6NIX2 430 aaPredicted RBP12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 CIAO1O76071 339 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 CWC27Q6UX04 472 aaKnown RBP12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 SLC51AQ86UW1 340 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 CNTROBQ8N137 903 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 CEP126Q9P2H0 1117 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 RBM25P49756 843 aaKnown RBP12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 SLFNL1Q499Z3 407 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 METTL24Q5JXM2 366 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 CASC1Q6TDU7 716 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 SETDB2Q96T68 719 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 YY1AP1Q9H869 796 aa12.89□□□□□ -0.35
LRRTM4-204ENST00000409884 ZNF609O15014 1411 aa12.88□□□□□ -0.35
LRRTM4-204ENST00000409884 FSD2A1L4K1 749 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms