RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 SCRN1Q12765 414 aa13.29□□□□□ -0.28
ITGA6-203ENST00000409532 ERCC4Q92889 916 aaPredicted RBP13.29□□□□□ -0.28
ITGA6-203ENST00000409532 TRIM5Q9C035 493 aa13.29□□□□□ -0.28
ITGA6-203ENST00000409532 CBX8Q9HC52 389 aa13.29□□□□□ -0.28
ITGA6-203ENST00000409532 A1BGP04217 495 aa13.29□□□□□ -0.28
ITGA6-203ENST00000409532 RAB11FIP4Q86YS3 637 aa13.29□□□□□ -0.28
ITGA6-203ENST00000409532 MEGF6O75095 1541 aa13.28□□□□□ -0.28
ITGA6-203ENST00000409532 LRMPQ12912 555 aa13.28□□□□□ -0.28
ITGA6-203ENST00000409532 LRRC24Q50LG9 513 aa13.28□□□□□ -0.28
ITGA6-203ENST00000409532 HSP90AB3PQ58FF7 597 aa13.28□□□□□ -0.28
ITGA6-203ENST00000409532 DYNC1I1O14576 645 aa13.28□□□□□ -0.28
ITGA6-203ENST00000409532 KRT32Q14532 448 aa13.28□□□□□ -0.28
ITGA6-203ENST00000409532 LRP10Q7Z4F1 713 aa13.28□□□□□ -0.28
ITGA6-203ENST00000409532 ZMYND15Q9H091 742 aa13.28□□□□□ -0.28
ITGA6-203ENST00000409532 FKBP4Q02790 459 aaKnown RBP eCLIP13.27□□□□□ -0.28
ITGA6-203ENST00000409532 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.28
ITGA6-203ENST00000409532 CCDC186Q7Z3E2 898 aa13.27□□□□□ -0.28
ITGA6-203ENST00000409532 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.28
ITGA6-203ENST00000409532 ATF3P18847 181 aa13.27□□□□□ -0.28
ITGA6-203ENST00000409532 HAUS7Q99871 368 aa13.27□□□□□ -0.28
ITGA6-203ENST00000409532 HAND2P61296 217 aa13.27□□□□□ -0.29
ITGA6-203ENST00000409532 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
ITGA6-203ENST00000409532 PUS3Q9BZE2 481 aaKnown RBP13.27□□□□□ -0.29
ITGA6-203ENST00000409532 NBPF26B4DH59 902 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 ZNF165P49910 485 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 NBPF14Q5TI25 921 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 USPL1Q5W0Q7 1092 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 NBPF10Q6P3W6 841 aaKnown RBP13.26□□□□□ -0.29
ITGA6-203ENST00000409532 NBPF15Q8N660 670 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 KBTBD3Q8NAB2 608 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
ITGA6-203ENST00000409532 PAG1Q9NWQ8 432 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 C19orf44Q9H6X5 657 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 C5P01031 1676 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 RESTQ13127 1097 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 MYRIPQ8NFW9 859 aa13.26□□□□□ -0.29
ITGA6-203ENST00000409532 ELP1O95163 1332 aa13.25□□□□□ -0.29
ITGA6-203ENST00000409532 OTUD7BQ6GQQ9 843 aa13.25□□□□□ -0.29
ITGA6-203ENST00000409532 KIAA1524Q8TCG1 905 aa13.25□□□□□ -0.29
ITGA6-203ENST00000409532 PTPDC1A2A3K4 754 aa13.25□□□□□ -0.29
ITGA6-203ENST00000409532 GOLGA6L6A8MZA4 724 aa13.25□□□□□ -0.29
ITGA6-203ENST00000409532 RABL6Q3YEC7 729 aaPredicted RBP13.25□□□□□ -0.29
ITGA6-203ENST00000409532 PLBD2Q8NHP8 589 aa13.25□□□□□ -0.29
ITGA6-203ENST00000409532 CLSTN2Q9H4D0 955 aa13.25□□□□□ -0.29
ITGA6-203ENST00000409532 IFIT1P09914 478 aaKnown RBP13.25□□□□□ -0.29
ITGA6-203ENST00000409532 FOXO4P98177 505 aa13.25□□□□□ -0.29
ITGA6-203ENST00000409532 TSGA10IPQ3SY00 556 aa13.25□□□□□ -0.29
ITGA6-203ENST00000409532 DDX19AQ9NUU7 478 aaKnown RBP13.25□□□□□ -0.29
ITGA6-203ENST00000409532 GORABQ5T7V8 394 aa13.24□□□□□ -0.29
ITGA6-203ENST00000409532 ATG9AQ7Z3C6 839 aa13.24□□□□□ -0.29
ITGA6-203ENST00000409532 OVOS2A0A0G2JMS6 1433 aa13.24□□□□□ -0.29
ITGA6-203ENST00000409532 WASHC4Q2M389 1173 aa13.24□□□□□ -0.29
ITGA6-203ENST00000409532 DHX32Q7L7V1 743 aaKnown RBP13.24□□□□□ -0.29
ITGA6-203ENST00000409532 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
ITGA6-203ENST00000409532 CTDNEP1O95476 244 aa13.23□□□□□ -0.29
ITGA6-203ENST00000409532 CASP7P55210 303 aa13.23□□□□□ -0.29
ITGA6-203ENST00000409532 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
ITGA6-203ENST00000409532 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
ITGA6-203ENST00000409532 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
ITGA6-203ENST00000409532 SLIT3O75094 1523 aa13.23□□□□□ -0.29
ITGA6-203ENST00000409532 A0A1B0GUL7 405 aa13.23□□□□□ -0.29
ITGA6-203ENST00000409532 HSPD1P10809 573 aaKnown RBP13.23□□□□□ -0.29
ITGA6-203ENST00000409532 USP28Q96RU2 1077 aa13.23□□□□□ -0.29
ITGA6-203ENST00000409532 CWC25Q9NXE8 425 aaPredicted RBP13.23□□□□□ -0.29
ITGA6-203ENST00000409532 KAT6BQ8WYB5 2073 aa13.23□□□□□ -0.29
ITGA6-203ENST00000409532 E7EWF7 191 aa13.22□□□□□ -0.29
ITGA6-203ENST00000409532 ME1P48163 572 aa13.22□□□□□ -0.29
ITGA6-203ENST00000409532 PRDM10Q9NQV6 1147 aa13.22□□□□□ -0.29
ITGA6-203ENST00000409532 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
ITGA6-203ENST00000409532 PI16Q6UXB8 463 aa13.22□□□□□ -0.29
ITGA6-203ENST00000409532 C11orf57Q6ZUT1 292 aaPredicted RBP13.22□□□□□ -0.29
ITGA6-203ENST00000409532 TOM1L2Q6ZVM7 507 aa13.22□□□□□ -0.29
ITGA6-203ENST00000409532 ALDH8A1Q9H2A2 487 aaPredicted RBP13.22□□□□□ -0.29
ITGA6-203ENST00000409532 CFAP45Q9UL16 551 aa13.22□□□□□ -0.29
ITGA6-203ENST00000409532 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
ITGA6-203ENST00000409532 GOLPH3LQ9H4A5 285 aa13.22□□□□□ -0.29
ITGA6-203ENST00000409532 SPTLC3Q9NUV7 552 aa13.22□□□□□ -0.29
ITGA6-203ENST00000409532 KIF3AQ9Y496 699 aa13.22□□□□□ -0.29
ITGA6-203ENST00000409532 SIPA1L3O60292 1781 aaPredicted RBP13.21□□□□□ -0.29
ITGA6-203ENST00000409532 M0R2C6 588 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
ITGA6-203ENST00000409532 ADORA1P30542 326 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 ARID5BQ14865 1188 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 MAST3O60307 1309 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 AFDNP55196 1824 aaKnown RBP13.21□□□□□ -0.29
ITGA6-203ENST00000409532 GOLGA6L19H0YKK7 550 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 H7C1W4 665 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 PFKFB2O60825 505 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 ZNF75DP51815 510 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 HMGN5P82970 282 aaKnown RBP13.21□□□□□ -0.29
ITGA6-203ENST00000409532 ZNF710Q8N1W2 664 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 PRIMPOLQ96LW4 560 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.29
ITGA6-203ENST00000409532 JCADQ9P266 1359 aa13.21□□□□□ -0.3
ITGA6-203ENST00000409532 CHAF1AQ13111 956 aaPredicted RBP13.21□□□□□ -0.3
ITGA6-203ENST00000409532 OSBP2Q969R2 916 aa13.21□□□□□ -0.3
ITGA6-203ENST00000409532 ZSCAN16Q9H4T2 348 aaPredicted RBP13.2□□□□□ -0.3
ITGA6-203ENST00000409532 EYA2O00167 538 aa13.2□□□□□ -0.3
ITGA6-203ENST00000409532 PDIA4P13667 645 aaKnown RBP13.2□□□□□ -0.3
ITGA6-203ENST00000409532 CCDC144BQ3MJ40 725 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms