RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 APBB1IPQ7Z5R6 666 aaPredicted RBP13.77□□□□□ -0.21
SHANK2-203ENST00000409161 CCDC63Q8NA47 563 aa13.77□□□□□ -0.21
SHANK2-203ENST00000409161 CNNM2Q9H8M5 875 aa13.77□□□□□ -0.21
SHANK2-203ENST00000409161 RANBP6O60518 1105 aaKnown RBP13.76□□□□□ -0.21
SHANK2-203ENST00000409161 STMN1P16949 149 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 MAP7Q14244 749 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 MFSD6Q6ZSS7 791 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 CCDC144CPQ8IYA2 1237 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 CCDC26Q8TAB7 109 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 ZNF853P0CG23 659 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 NUTM2GQ5VZR2 741 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 ANKRD24Q8TF21 1146 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 BAG3O95817 575 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 PPM1FP49593 454 aaPredicted RBP13.76□□□□□ -0.21
SHANK2-203ENST00000409161 KRT23Q9C075 422 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.76□□□□□ -0.21
SHANK2-203ENST00000409161 TMEM67Q5HYA8 995 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 SERPINA10Q9UK55 444 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 HCLS1P14317 486 aaPredicted RBP13.76□□□□□ -0.21
SHANK2-203ENST00000409161 KCNH5Q8NCM2 988 aa13.76□□□□□ -0.21
SHANK2-203ENST00000409161 PUF60Q9UHX1 559 aaKnown RBP13.76□□□□□ -0.21
SHANK2-203ENST00000409161 IRX4P78413 519 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 TRPC3Q13507 836 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 NUF2Q9BZD4 464 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 TOM1L2Q6ZVM7 507 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 NUTM1Q86Y26 1132 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 RABGAP1Q9Y3P9 1069 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 BIN1O00499 593 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 ARL1P40616 181 aaPredicted RBP13.75□□□□□ -0.21
SHANK2-203ENST00000409161 TMEM87AQ8NBN3 555 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 BCAP29Q9UHQ4 241 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 ATP2C2O75185 946 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 TRIM14Q14142 442 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 TBC1D9Q6ZT07 1266 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 AFAP1L1Q8TED9 768 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
SHANK2-203ENST00000409161 PPP1R2P41236 205 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 NBPF8Q3BBV2 869 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 TAOK1Q7L7X3 1001 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 SELENOSQ9BQE4 189 aa13.75□□□□□ -0.21
SHANK2-203ENST00000409161 RASSF2P50749 326 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
SHANK2-203ENST00000409161 ANKIB1Q9P2G1 1089 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 GBP7Q8N8V2 638 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-203ENST00000409161 SEC62Q99442 399 aaKnown RBP13.74□□□□□ -0.21
SHANK2-203ENST00000409161 BUB1BO60566 1050 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-203ENST00000409161 PPFIA2O75334 1257 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 PCK1P35558 622 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 GABPB1Q06547 395 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-203ENST00000409161 CCDC62Q6P9F0 684 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 ZEB2O60315 1214 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 RARSP54136 660 aaKnown RBP13.74□□□□□ -0.21
SHANK2-203ENST00000409161 DUSP27Q5VZP5 1158 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 CALCOCO2Q13137 446 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 NEDD9Q14511 834 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 CCDC42Q96M95 316 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 ZSWIM4Q9H7M6 989 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 IDEP14735 1019 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 GNAQP50148 359 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 BICD1Q96G01 975 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 KAT14Q9H8E8 782 aa13.74□□□□□ -0.21
SHANK2-203ENST00000409161 RTL1A6NKG5 1358 aa13.73□□□□□ -0.21
SHANK2-203ENST00000409161 ACTN4O43707 911 aaKnown RBP13.73□□□□□ -0.21
SHANK2-203ENST00000409161 BOLA2Q9H3K6 86 aa13.73□□□□□ -0.21
SHANK2-203ENST00000409161 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.73□□□□□ -0.21
SHANK2-203ENST00000409161 ZFP91Q96JP5 570 aaPredicted RBP13.73□□□□□ -0.21
SHANK2-203ENST00000409161 TMEM132EQ6IEE7 984 aa13.73□□□□□ -0.21
SHANK2-203ENST00000409161 ECHDC1Q9NTX5 307 aa13.73□□□□□ -0.21
SHANK2-203ENST00000409161 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
SHANK2-203ENST00000409161 TMX1Q9H3N1 280 aa13.73□□□□□ -0.21
SHANK2-203ENST00000409161 WDR78Q5VTH9 848 aa13.73□□□□□ -0.21
SHANK2-203ENST00000409161 NEK1Q96PY6 1258 aa13.73□□□□□ -0.21
SHANK2-203ENST00000409161 PLCB1Q9NQ66 1216 aa13.73□□□□□ -0.21
SHANK2-203ENST00000409161 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 EPSTI1Q96J88 318 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 CALML3P27482 149 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 GSTO1P78417 241 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 ZBTB17Q13105 803 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 SNX21Q969T3 373 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 PPP1R7Q15435 360 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
SHANK2-203ENST00000409161 MAP3K21Q5TCX8 1036 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 RAB3IPQ96QF0 476 aaPredicted RBP13.72□□□□□ -0.21
SHANK2-203ENST00000409161 USP16Q9Y5T5 823 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 ZPR1O75312 459 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 CEP85LQ5SZL2 805 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 SPATS2Q86XZ4 545 aaKnown RBP13.72□□□□□ -0.21
SHANK2-203ENST00000409161 TCHPQ9BT92 498 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 VCX3AQ9NNX9 186 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
SHANK2-203ENST00000409161 HLA-DOAP06340 250 aa13.72□□□□□ -0.21
SHANK2-203ENST00000409161 CCDC38Q502W7 563 aa13.71□□□□□ -0.21
SHANK2-203ENST00000409161 VPS52Q8N1B4 723 aa13.71□□□□□ -0.21
SHANK2-203ENST00000409161 TTC22Q5TAA0 569 aa13.71□□□□□ -0.21
SHANK2-203ENST00000409161 UTP11Q9Y3A2 253 aaKnown RBP13.71□□□□□ -0.21
SHANK2-203ENST00000409161 ATP6V0A2Q9Y487 856 aa13.71□□□□□ -0.21
SHANK2-203ENST00000409161 IL16Q14005 1332 aa13.71□□□□□ -0.21
SHANK2-203ENST00000409161 VWA3BQ502W6 1294 aa13.71□□□□□ -0.21
SHANK2-203ENST00000409161 ZGPATQ8N5A5 531 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms