RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 MYL5Q02045 173 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 TRIM22Q8IYM9 498 aa8.51□□□□□ -1.05
HDAC9-202ENST00000405010 ATL3Q6DD88 541 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 DBF4Q9UBU7 674 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 MAP3K2Q9Y2U5 619 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 FANCAO15360 1455 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 PSDA5PKW4 1024 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 EFCAB8A8MWE9 144 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 SEC31AO94979 1220 aaKnown RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 XBP1P17861 261 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 APOBRQ0VD83 1088 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 DDX46Q7L014 1031 aaKnown RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 TARBP1Q13395 1621 aaKnown RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 EBAG9O00559 213 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 WDHD1O75717 1129 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 SLFN14P0C7P3 912 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 CHMP4BP1P59074 171 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 C11orf57Q6ZUT1 292 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 PAXIP1Q6ZW49 1069 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 PPP1R13BQ96KQ4 1090 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 PHAXQ9H814 394 aaKnown RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 CHPF2Q9P2E5 772 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 MAGEC2Q9UBF1 373 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-202ENST00000405010 CFAP74Q9C0B2 1584 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 KIAA0232Q92628 1395 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 ADCY10Q96PN6 1610 aa8.5□□□□□ -1.05
HDAC9-202ENST00000405010 A0A087WWV3 80 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 CTAGE9A4FU28 777 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 ARHGAP6O43182 974 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 CCDC144BQ3MJ40 725 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 CCDC144CPQ8IYA2 1237 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 PPM1EQ8WY54 764 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 SLC26A8Q96RN1 970 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 GOLGA6L10A6NI86 522 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 RRP12Q5JTH9 1297 aaKnown RBP8.49□□□□□ -1.05
HDAC9-202ENST00000405010 CCDC158Q5M9N0 1113 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 ZNF569Q5MCW4 686 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 GOLGA5Q8TBA6 731 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 NUP88Q99567 741 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-202ENST00000405010 ST7Q9NRC1 585 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 LAMC1P11047 1609 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 SAMD9LQ8IVG5 1584 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 USP27XA6NNY8 438 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 SART3Q15020 963 aaKnown RBP8.49□□□□□ -1.05
HDAC9-202ENST00000405010 RNF187Q5TA31 235 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-202ENST00000405010 SSH3Q8TE77 659 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 USP44Q9H0E7 712 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 HAND2P61296 217 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 RAD51AP2Q09MP3 1159 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 DHX32Q7L7V1 743 aaKnown RBP8.49□□□□□ -1.05
HDAC9-202ENST00000405010 CCDC91Q7Z6B0 441 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 USHBP1Q8N6Y0 703 aa8.49□□□□□ -1.05
HDAC9-202ENST00000405010 GOLIM4O00461 696 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 TUBB4BP68371 445 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 USP28Q96RU2 1077 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 BRMS1Q9HCU9 246 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 RRP15Q9Y3B9 282 aaKnown RBP8.48□□□□□ -1.05
HDAC9-202ENST00000405010 ABCC1P33527 1531 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 TRPM2O94759 1503 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 KLF18A0A0U1RQI7 1052 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 TUBBP07437 444 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 PIP4K2BP78356 416 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 MCMDC2Q4G0Z9 681 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 TTC39AQ5SRH9 613 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 CHST3Q7LGC8 479 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 PLA2G4DQ86XP0 818 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 NPATQ14207 1427 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 NBPF7P0C2Y1 421 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-202ENST00000405010 EIF5P55010 431 aaKnown RBP8.48□□□□□ -1.05
HDAC9-202ENST00000405010 DNAJC21Q5F1R6 531 aaKnown RBP8.48□□□□□ -1.05
HDAC9-202ENST00000405010 KIAA1468Q9P260 1216 aa8.48□□□□□ -1.05
HDAC9-202ENST00000405010 MYO1CO00159 1063 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 ATP8B1O43520 1251 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 IFIT1P09914 478 aaKnown RBP8.47□□□□□ -1.05
HDAC9-202ENST00000405010 NAA16Q6N069 864 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-202ENST00000405010 EFCC1Q9HA90 598 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 NCOA5Q9HCD5 579 aaKnown RBP8.47□□□□□ -1.05
HDAC9-202ENST00000405010 ZNF202O95125 648 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 BRD3Q15059 726 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-202ENST00000405010 MICALCLQ6ZW33 695 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 DHX37Q8IY37 1157 aaKnown RBP8.47□□□□□ -1.05
HDAC9-202ENST00000405010 LLPHQ9BRT6 129 aaKnown RBP8.47□□□□□ -1.05
HDAC9-202ENST00000405010 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
HDAC9-202ENST00000405010 CFAP65Q6ZU64 1925 aaKnown RBP8.47□□□□□ -1.05
HDAC9-202ENST00000405010 IQSEC2Q5JU85 1478 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 CROCC2H7BZ55 1655 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 YEATS4O95619 227 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 TXLNAP40222 546 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 NLRP12P59046 1061 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 CT47A1Q5JQC4 288 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-202ENST00000405010 CEP126Q9P2H0 1117 aa8.47□□□□□ -1.05
HDAC9-202ENST00000405010 N4BP3O15049 544 aa8.46□□□□□ -1.05
HDAC9-202ENST00000405010 RAPGEF4Q8WZA2 1011 aa8.46□□□□□ -1.05
HDAC9-202ENST00000405010 TMEM51Q9NW97 253 aa8.46□□□□□ -1.05
HDAC9-202ENST00000405010 CDC42BPAQ5VT25 1732 aa8.46□□□□□ -1.05
HDAC9-202ENST00000405010 MYOM2P54296 1465 aa8.46□□□□□ -1.05
HDAC9-202ENST00000405010 GRM8O00222 908 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms