RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 NBPF5PQ86XG9 351 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 PLEKHM2Q8IWE5 1019 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 NCOA7Q8NI08 942 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 ZNF622Q969S3 477 aaKnown RBP eCLIP3.76□□□□□ -1.819e-7■■■□□ 18.2
KNL1-202ENST00000399668 NBPF4Q96M43 638 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 TMOD2Q9NZR1 351 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 BCCIPQ9P287 314 aaKnown RBP eCLIP3.76□□□□□ -1.81
KNL1-202ENST00000399668 CACNA1CQ13936 2221 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 ANKRD62A6NC57 917 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 SYKP43405 635 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 PRIM1P49642 420 aaKnown RBP3.75□□□□□ -1.81
KNL1-202ENST00000399668 TIMM10P62072 90 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 CCDC152Q4G0S7 254 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 SIRT1Q96EB6 747 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 RNF41Q9H4P4 317 aaPredicted RBP3.75□□□□□ -1.81
KNL1-202ENST00000399668 IQGAP3Q86VI3 1631 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 ZBTB43O43298 467 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 GCP02774 474 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 PDE4BQ07343 736 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 MYO7AQ13402 2215 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 CCDC102AQ96A19 550 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 PHAXQ9H814 394 aaKnown RBP3.75□□□□□ -1.81
KNL1-202ENST00000399668 PAG1Q9NWQ8 432 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 UGGT1Q9NYU2 1555 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 SHANK2Q9UPX8 1470 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 NIP7Q9Y221 180 aaKnown RBP eCLIP3.75□□□□□ -1.81
KNL1-202ENST00000399668 MYO5AQ9Y4I1 1855 aaKnown RBP3.75□□□□□ -1.81
KNL1-202ENST00000399668 AKAP11Q9UKA4 1901 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 LTN1O94822 1766 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 UHRF1BP1Q6BDS2 1440 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 KIF5CO60282 957 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 BAG3O95817 575 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 ZSCAN22P10073 491 aaPredicted RBP3.75□□□□□ -1.81
KNL1-202ENST00000399668 UBA7P41226 1012 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 UBASH3AP57075 661 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 WTAPQ15007 396 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 STX1AQ16623 288 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 G2E3Q7L622 706 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 EYA1Q99502 592 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 ALG1Q9BT22 464 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 SAMM50Q9Y512 469 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 LAMC1P11047 1609 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 CLTCL1P53675 1640 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 MAP3K5Q99683 1374 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 KLF18A0A0U1RQI7 1052 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 SPDYE4A6NLX3 237 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 POLR3GO15318 223 aaPredicted RBP3.75□□□□□ -1.81
KNL1-202ENST00000399668 CYP7A1P22680 504 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 KIF4BQ2VIQ3 1234 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 AKAP4Q5JQC9 854 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 SLC9C2Q5TAH2 1124 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 PDCL2Q8N4E4 241 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 ZSCAN16Q9H4T2 348 aaPredicted RBP3.75□□□□□ -1.81
KNL1-202ENST00000399668 TCP11L1Q9NUJ3 509 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 SBNO2Q9Y2G9 1366 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 MAP3K19Q56UN5 1328 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 NPHP3Q7Z494 1330 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 KIF5BP33176 963 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 MAPK8IP2Q13387 824 aaPredicted RBP3.75□□□□□ -1.81
KNL1-202ENST00000399668 SPA17Q15506 151 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 SPTY2D1Q68D10 685 aaPredicted RBP3.75□□□□□ -1.81
KNL1-202ENST00000399668 KSR2Q6VAB6 950 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 FEZ1Q99689 392 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 ZKSCAN3Q9BRR0 538 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 KAT14Q9H8E8 782 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 HMG20BQ9P0W2 317 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 TSPY3P0CV98 308 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 TSPY8P0CW00 308 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 CPA1P15085 419 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 TTLL12Q14166 644 aaPredicted RBP3.75□□□□□ -1.81
KNL1-202ENST00000399668 ATP2B3Q16720 1220 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 CCDC148Q8NFR7 591 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 RAB34Q9BZG1 259 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 ZSWIM4Q9H7M6 989 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 MMRN2Q9H8L6 949 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 GOPCQ9HD26 462 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 TRIM35Q9UPQ4 493 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 SPEF2Q9C093 1822 aa3.75□□□□□ -1.81
KNL1-202ENST00000399668 CCDC194A0A1B0GVG4 234 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 EIF3JO75822 258 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 PTGS1P23219 599 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 NOP2P46087 812 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 RTN1Q16799 776 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 CCDC178Q5BJE1 867 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 PIK3C2GO75747 1445 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 POLR3AO14802 1390 aaPredicted RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 PPLO60437 1756 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 PPP1R12BO60237 982 aaPredicted RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 AK2P54819 239 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 HEATR3Q7Z4Q2 680 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 MIGA1Q8NAN2 632 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 BRF1Q92994 677 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 FAM89AQ96GI7 184 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 TEX13AQ9BXU3 409 aaPredicted RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 NDUFB9Q9Y6M9 179 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 CCDC66A2RUB6 948 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 FGFR1OPO95684 399 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 MTIF2P46199 727 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 ATP8B2P98198 1209 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 APOBRQ0VD83 1088 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms