RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 TMEM266Q2M3C6 531 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 MYO6Q9UM54 1294 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 PRDM15P57071 1507 aaPredicted RBP16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 ADCY5O95622 1261 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 PTPN14Q15678 1187 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 ATP7BP35670 1465 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 PLEKHG1Q9ULL1 1385 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 RUFY3Q7L099 469 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 PYM1Q9BRP8 204 aaKnown RBP16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 ST5P78524 1137 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 TMEM132AQ24JP5 1023 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 IL17REQ8NFR9 667 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 CDCA7Q9BWT1 371 aaPredicted RBP16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 NYXQ9GZU5 481 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 ZSCAN12O43309 604 aa16.43■□□□□ 0.22
PCDHGA11-201ENST00000398587 GNAT2P19087 354 aa16.43■□□□□ 0.22
PCDHGA11-201ENST00000398587 BIN1O00499 593 aa16.43■□□□□ 0.22
PCDHGA11-201ENST00000398587 DNM1Q05193 864 aaKnown RBP16.43■□□□□ 0.22
PCDHGA11-201ENST00000398587 RTN1Q16799 776 aa16.43■□□□□ 0.22
PCDHGA11-201ENST00000398587 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
PCDHGA11-201ENST00000398587 ZNF496Q96IT1 587 aaPredicted RBP16.43■□□□□ 0.22
PCDHGA11-201ENST00000398587 TNNI3KQ59H18 835 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 FPGT-TNNI3KV9GXZ4 949 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 BMP15O95972 392 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 GSDMDP57764 484 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 GCKRQ14397 625 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 TCP11L1Q9NUJ3 509 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 HECW2Q9P2P5 1572 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 SGSM2O43147 1006 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 FAM89AQ96GI7 184 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 HELLSQ9NRZ9 838 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 STX8Q9UNK0 236 aa16.42■□□□□ 0.22
PCDHGA11-201ENST00000398587 UBA7P41226 1012 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 TIMM10P62072 90 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 ZNF397Q8NF99 534 aaPredicted RBP16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 KIF1BO60333 1816 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 CCDC181Q5TID7 509 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 SUCLG2Q96I99 432 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 C8orf37Q96NL8 207 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 PDCL3Q9H2J4 239 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 A0A1B0GUL7 405 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 ERLIN1O75477 346 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 HLA-DOAP06340 250 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 SYKP43405 635 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 MRPS27Q92552 414 aaKnown RBP16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 DBNDD2Q9BQY9 259 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 IFIT1BQ5T764 474 aaKnown RBP16.41■□□□□ 0.22
PCDHGA11-201ENST00000398587 CDC42BPAQ5VT25 1732 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 XRCC6P12956 609 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 KIF18AQ8NI77 898 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 DACT1Q9NYF0 836 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 ARAP3Q8WWN8 1544 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 GNAQP50148 359 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 PANK2Q9BZ23 570 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 FGFR1OPO95684 399 aaKnown RBP16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 A1BGP04217 495 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 FKBP15Q5T1M5 1219 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 UBXN4Q92575 508 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 SH3TC1Q8TE82 1336 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 ADCY10Q96PN6 1610 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 TET3O43151 1660 aa16.4■□□□□ 0.22
PCDHGA11-201ENST00000398587 GIGYF1O75420 1035 aaPredicted RBP16.39■□□□□ 0.22
PCDHGA11-201ENST00000398587 RDXP35241 583 aaKnown RBP16.39■□□□□ 0.22
PCDHGA11-201ENST00000398587 PARP10Q53GL7 1025 aa16.39■□□□□ 0.22
PCDHGA11-201ENST00000398587 KIAA1328Q86T90 577 aa16.39■□□□□ 0.22
PCDHGA11-201ENST00000398587 FAM200AQ8TCP9 573 aa16.39■□□□□ 0.22
PCDHGA11-201ENST00000398587 USP44Q9H0E7 712 aa16.39■□□□□ 0.22
PCDHGA11-201ENST00000398587 PPP1R12BO60237 982 aaPredicted RBP16.39■□□□□ 0.21
PCDHGA11-201ENST00000398587 TNIP1Q15025 636 aa16.39■□□□□ 0.21
PCDHGA11-201ENST00000398587 KLHDC4Q8TBB5 520 aa16.39■□□□□ 0.21
PCDHGA11-201ENST00000398587 TSG101Q99816 390 aa16.39■□□□□ 0.21
PCDHGA11-201ENST00000398587 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
PCDHGA11-201ENST00000398587 RTL1A6NKG5 1358 aa16.39■□□□□ 0.21
PCDHGA11-201ENST00000398587 KIF20AO95235 890 aa16.39■□□□□ 0.21
PCDHGA11-201ENST00000398587 SYT1P21579 422 aa16.39■□□□□ 0.21
PCDHGA11-201ENST00000398587 SSH3Q8TE77 659 aa16.39■□□□□ 0.21
PCDHGA11-201ENST00000398587 CUL5Q93034 780 aa16.39■□□□□ 0.21
PCDHGA11-201ENST00000398587 MAGEB6P1A0A0J9YX57 407 aa16.38■□□□□ 0.21
PCDHGA11-201ENST00000398587 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
PCDHGA11-201ENST00000398587 APOBRQ0VD83 1088 aa16.38■□□□□ 0.21
PCDHGA11-201ENST00000398587 AMPD3Q01432 767 aa16.38■□□□□ 0.21
PCDHGA11-201ENST00000398587 IQGAP3Q86VI3 1631 aa16.38■□□□□ 0.21
PCDHGA11-201ENST00000398587 CALML4Q96GE6 196 aa16.38■□□□□ 0.21
PCDHGA11-201ENST00000398587 VAT1LQ9HCJ6 419 aa16.38■□□□□ 0.21
PCDHGA11-201ENST00000398587 PTPDC1A2A3K4 754 aa16.38■□□□□ 0.21
PCDHGA11-201ENST00000398587 SLAIN2Q9P270 581 aa16.38■□□□□ 0.21
PCDHGA11-201ENST00000398587 IQCEQ6IPM2 695 aa16.37■□□□□ 0.21
PCDHGA11-201ENST00000398587 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
PCDHGA11-201ENST00000398587 MAGEB6Q8N7X4 407 aa16.37■□□□□ 0.21
PCDHGA11-201ENST00000398587 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
PCDHGA11-201ENST00000398587 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
PCDHGA11-201ENST00000398587 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
PCDHGA11-201ENST00000398587 CHST3Q7LGC8 479 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms