RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 FAM177BA6PVY3 158 aa15.73■□□□□ 0.11
TRIM40-207ENST00000396581 DDX54Q8TDD1 881 aaKnown RBP15.73■□□□□ 0.11
TRIM40-207ENST00000396581 PRAMEF22A3QJZ6 481 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 SMTNL1A8MU46 457 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 GRM8O00222 908 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 KCNJ4P48050 445 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 ZSCAN25Q6NSZ9 544 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 SUCLG2Q96I99 432 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 ZNF496Q96IT1 587 aaPredicted RBP15.72■□□□□ 0.11
TRIM40-207ENST00000396581 PGBD1Q96JS3 809 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 UBAP1LF5GYI3 381 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 RESTQ13127 1097 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 SARM1Q6SZW1 724 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 CKAP2LQ8IYA6 745 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 FEZ1Q99689 392 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 PRDM10Q9NQV6 1147 aa15.72■□□□□ 0.11
TRIM40-207ENST00000396581 RFX7Q2KHR2 1363 aa15.71■□□□□ 0.11
TRIM40-207ENST00000396581 CBX1P83916 185 aa15.71■□□□□ 0.11
TRIM40-207ENST00000396581 G3BP1Q13283 466 aaKnown RBP eCLIP15.71■□□□□ 0.11
TRIM40-207ENST00000396581 KRT32Q14532 448 aa15.71■□□□□ 0.11
TRIM40-207ENST00000396581 CWF19L2Q2TBE0 894 aaKnown RBP15.71■□□□□ 0.11
TRIM40-207ENST00000396581 TTC5Q8N0Z6 440 aa15.71■□□□□ 0.11
TRIM40-207ENST00000396581 TAF6LQ9Y6J9 622 aa15.71■□□□□ 0.11
TRIM40-207ENST00000396581 DISP2A7MBM2 1401 aa15.71■□□□□ 0.11
TRIM40-207ENST00000396581 GOLGA6L4A6NEF3 574 aa15.71■□□□□ 0.1
TRIM40-207ENST00000396581 NR1I2O75469 434 aa15.71■□□□□ 0.1
TRIM40-207ENST00000396581 TAF5LO75529 589 aa15.71■□□□□ 0.1
TRIM40-207ENST00000396581 NCBP1Q09161 790 aaKnown RBP15.71■□□□□ 0.1
TRIM40-207ENST00000396581 PROSER3Q2NL68 480 aa15.71■□□□□ 0.1
TRIM40-207ENST00000396581 GTF3C6Q969F1 213 aa15.71■□□□□ 0.1
TRIM40-207ENST00000396581 PAXBP1Q9Y5B6 917 aa15.71■□□□□ 0.1
TRIM40-207ENST00000396581 SNRPA1P09661 255 aaKnown RBP15.7■□□□□ 0.1
TRIM40-207ENST00000396581 ZNF165P49910 485 aa15.7■□□□□ 0.1
TRIM40-207ENST00000396581 LRMPQ12912 555 aa15.7■□□□□ 0.1
TRIM40-207ENST00000396581 ZNF589Q86UQ0 364 aaPredicted RBP15.7■□□□□ 0.1
TRIM40-207ENST00000396581 FMNL2Q96PY5 1086 aa15.7■□□□□ 0.1
TRIM40-207ENST00000396581 FSD1Q9BTV5 496 aa15.7■□□□□ 0.1
TRIM40-207ENST00000396581 ZSCAN16Q9H4T2 348 aaPredicted RBP15.7■□□□□ 0.1
TRIM40-207ENST00000396581 BICC1Q9H694 974 aaKnown RBP15.7■□□□□ 0.1
TRIM40-207ENST00000396581 DDX21Q9NR30 783 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRIM40-207ENST00000396581 TLR7Q9NYK1 1049 aaKnown RBP15.7■□□□□ 0.1
TRIM40-207ENST00000396581 TFIP11Q9UBB9 837 aaKnown RBP15.7■□□□□ 0.1
TRIM40-207ENST00000396581 NRBP1Q9UHY1 535 aa15.7■□□□□ 0.1
TRIM40-207ENST00000396581 ADAMTS2O95450 1211 aa15.69■□□□□ 0.1
TRIM40-207ENST00000396581 PDIA6Q15084 440 aa15.69■□□□□ 0.1
TRIM40-207ENST00000396581 TRIM5Q9C035 493 aa15.69■□□□□ 0.1
TRIM40-207ENST00000396581 CCDC8Q9H0W5 538 aaPredicted RBP15.69■□□□□ 0.1
TRIM40-207ENST00000396581 CHMP3Q9Y3E7 222 aa15.69■□□□□ 0.1
TRIM40-207ENST00000396581 SHANK3Q9BYB0 1731 aa15.69■□□□□ 0.1
TRIM40-207ENST00000396581 IQCB1Q15051 598 aa15.69■□□□□ 0.1
TRIM40-207ENST00000396581 BOLA2Q9H3K6 86 aa15.69■□□□□ 0.1
TRIM40-207ENST00000396581 KIF20AO95235 890 aa15.68■□□□□ 0.1
TRIM40-207ENST00000396581 TCEANC2Q96MN5 208 aa15.68■□□□□ 0.1
TRIM40-207ENST00000396581 COL15A1P39059 1388 aa15.68■□□□□ 0.1
TRIM40-207ENST00000396581 NEMFO60524 1076 aa15.67■□□□□ 0.1
TRIM40-207ENST00000396581 TNNT1P13805 278 aa15.67■□□□□ 0.1
TRIM40-207ENST00000396581 RBM6P78332 1123 aaKnown RBP15.67■□□□□ 0.1
TRIM40-207ENST00000396581 SMARCC2Q8TAQ2 1214 aa15.67■□□□□ 0.1
TRIM40-207ENST00000396581 CACTINQ8WUQ7 758 aaKnown RBP15.67■□□□□ 0.1
TRIM40-207ENST00000396581 MRFAP1L1Q96HT8 127 aa15.67■□□□□ 0.1
TRIM40-207ENST00000396581 DNAJC25Q9H1X3 360 aa15.67■□□□□ 0.1
TRIM40-207ENST00000396581 CFAP45Q9UL16 551 aa15.67■□□□□ 0.1
TRIM40-207ENST00000396581 CTAGE5O15320 804 aa15.67■□□□□ 0.1
TRIM40-207ENST00000396581 ADD1P35611 737 aaKnown RBP15.67■□□□□ 0.1
TRIM40-207ENST00000396581 LLPHQ9BRT6 129 aaKnown RBP15.67■□□□□ 0.1
TRIM40-207ENST00000396581 CLIP2Q9UDT6 1046 aa15.67■□□□□ 0.1
TRIM40-207ENST00000396581 DDX58O95786 925 aaKnown RBP15.66■□□□□ 0.1
TRIM40-207ENST00000396581 ATP5JP18859 108 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 U2AF2P26368 475 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRIM40-207ENST00000396581 CCDC144BQ3MJ40 725 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 DRC7Q8IY82 874 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 CCDC144CPQ8IYA2 1237 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 BICD2Q8TD16 824 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 BRF1Q92994 677 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 C16orf45Q96MC5 204 aaPredicted RBP15.66■□□□□ 0.1
TRIM40-207ENST00000396581 NEK1Q96PY6 1258 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 KCND1Q9NSA2 647 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 OGFRQ9NZT2 677 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 THRAP3Q9Y2W1 955 aaKnown RBP15.66■□□□□ 0.1
TRIM40-207ENST00000396581 USP16Q9Y5T5 823 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 JAK2O60674 1132 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 IGKV5-2P06315 115 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 CDCA7Q9BWT1 371 aaPredicted RBP15.66■□□□□ 0.1
TRIM40-207ENST00000396581 CTNNA3Q9UI47 895 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 RCOR1Q9UKL0 485 aa15.66■□□□□ 0.1
TRIM40-207ENST00000396581 SPATA31A1Q5TZJ5 1347 aa15.65■□□□□ 0.1
TRIM40-207ENST00000396581 NUTM2BA6NNL0 878 aaPredicted RBP15.65■□□□□ 0.1
TRIM40-207ENST00000396581 NUTM2EB1AL46 878 aaPredicted RBP15.65■□□□□ 0.1
TRIM40-207ENST00000396581 NUTM2AQ8IVF1 878 aaPredicted RBP15.65■□□□□ 0.1
TRIM40-207ENST00000396581 LRRC8AQ8IWT6 810 aa15.65■□□□□ 0.1
TRIM40-207ENST00000396581 MYH15Q9Y2K3 1946 aa15.64■□□□□ 0.09
TRIM40-207ENST00000396581 EXOC5O00471 708 aa15.64■□□□□ 0.09
TRIM40-207ENST00000396581 STK3Q13188 491 aa15.64■□□□□ 0.09
TRIM40-207ENST00000396581 ATL3Q6DD88 541 aa15.64■□□□□ 0.09
TRIM40-207ENST00000396581 NAA16Q6N069 864 aaPredicted RBP15.64■□□□□ 0.09
TRIM40-207ENST00000396581 LRP10Q7Z4F1 713 aa15.64■□□□□ 0.09
TRIM40-207ENST00000396581 COPRSQ9NQ92 184 aa15.64■□□□□ 0.09
TRIM40-207ENST00000396581 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
TRIM40-207ENST00000396581 SLIT2O94813 1529 aa15.64■□□□□ 0.09
TRIM40-207ENST00000396581 PLCH1Q4KWH8 1693 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms