RNA–Protein interactions for RNA: ENST00000394990.8

SMIM29-202, Transcript of small integral membrane protein 29, humanhuman

TSL 1 (best) BASIC

Gene SMIM29, Length 792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-202ENST00000394990 LRRC37AA6NMS7 1700 aa17.95■□□□□ 0.46
SMIM29-202ENST00000394990 RBBP6Q7Z6E9 1792 aaKnown RBP17.95■□□□□ 0.46
SMIM29-202ENST00000394990 MYL6BP14649 208 aa17.95■□□□□ 0.46
SMIM29-202ENST00000394990 WASHC4Q2M389 1173 aa17.95■□□□□ 0.46
SMIM29-202ENST00000394990 ANGEL2Q5VTE6 544 aaKnown RBP17.95■□□□□ 0.46
SMIM29-202ENST00000394990 RTF1Q92541 710 aaKnown RBP17.95■□□□□ 0.46
SMIM29-202ENST00000394990 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
SMIM29-202ENST00000394990 UBE2Q2LH0YL09 131 aa17.94■□□□□ 0.46
SMIM29-202ENST00000394990 CEP290O15078 2479 aa17.93■□□□□ 0.46
SMIM29-202ENST00000394990 RIMBP2O15034 1052 aa17.93■□□□□ 0.46
SMIM29-202ENST00000394990 ECE2O60344 883 aa17.93■□□□□ 0.46
SMIM29-202ENST00000394990 HCLS1P14317 486 aaPredicted RBP17.93■□□□□ 0.46
SMIM29-202ENST00000394990 EN2P19622 333 aaPredicted RBP17.93■□□□□ 0.46
SMIM29-202ENST00000394990 SCARF1Q14162 830 aa17.93■□□□□ 0.46
SMIM29-202ENST00000394990 TAF7Q15545 349 aaPredicted RBP17.93■□□□□ 0.46
SMIM29-202ENST00000394990 DDX46Q7L014 1031 aaKnown RBP17.93■□□□□ 0.46
SMIM29-202ENST00000394990 CUL9Q8IWT3 2517 aa17.93■□□□□ 0.46
SMIM29-202ENST00000394990 VIL1P09327 827 aaKnown RBP17.92■□□□□ 0.46
SMIM29-202ENST00000394990 DOK7Q18PE1 504 aa17.92■□□□□ 0.46
SMIM29-202ENST00000394990 OTOP1Q7RTM1 612 aa17.92■□□□□ 0.46
SMIM29-202ENST00000394990 POLLQ9UGP5 575 aa17.92■□□□□ 0.46
SMIM29-202ENST00000394990 TRIM17Q9Y577 477 aa17.92■□□□□ 0.46
SMIM29-202ENST00000394990 TAF1P21675 1872 aa17.92■□□□□ 0.46
SMIM29-202ENST00000394990 ZNF280AP59817 542 aaPredicted RBP17.91■□□□□ 0.46
SMIM29-202ENST00000394990 MKRN3Q13064 507 aaKnown RBP17.91■□□□□ 0.46
SMIM29-202ENST00000394990 TMC4Q7Z404 712 aa17.91■□□□□ 0.46
SMIM29-202ENST00000394990 LRP10Q7Z4F1 713 aa17.91■□□□□ 0.46
SMIM29-202ENST00000394990 OTUD5Q96G74 571 aa17.91■□□□□ 0.46
SMIM29-202ENST00000394990 LAMA3Q16787 3333 aa17.91■□□□□ 0.46
SMIM29-202ENST00000394990 SCN9AQ15858 1988 aa17.9■□□□□ 0.46
SMIM29-202ENST00000394990 PPP2R1AP30153 589 aa17.9■□□□□ 0.46
SMIM29-202ENST00000394990 NSFL1CQ9UNZ2 370 aaKnown RBP17.9■□□□□ 0.46
SMIM29-202ENST00000394990 SCAF8Q9UPN6 1271 aaKnown RBP17.9■□□□□ 0.46
SMIM29-202ENST00000394990 HTATSF1O43719 755 aaKnown RBP17.89■□□□□ 0.45
SMIM29-202ENST00000394990 NEFLP07196 543 aa17.89■□□□□ 0.45
SMIM29-202ENST00000394990 EIF4A1P60842 406 aaKnown RBP17.89■□□□□ 0.45
SMIM29-202ENST00000394990 SREBF2Q12772 1141 aa17.89■□□□□ 0.45
SMIM29-202ENST00000394990 SLC17A8Q8NDX2 589 aa17.89■□□□□ 0.45
SMIM29-202ENST00000394990 ARMC5Q96C12 935 aa17.89■□□□□ 0.45
SMIM29-202ENST00000394990 PITPNM2Q9BZ72 1349 aa17.89■□□□□ 0.45
SMIM29-202ENST00000394990 DDX60Q8IY21 1712 aaKnown RBP17.89■□□□□ 0.45
SMIM29-202ENST00000394990 ZNF609O15014 1411 aa17.89■□□□□ 0.45
SMIM29-202ENST00000394990 COL4A1P02462 1669 aa17.88■□□□□ 0.45
SMIM29-202ENST00000394990 PRAMEF18Q5VWM3 479 aa17.88■□□□□ 0.45
SMIM29-202ENST00000394990 KDM3BQ7LBC6 1761 aa17.88■□□□□ 0.45
SMIM29-202ENST00000394990 C6orf229H3BNL8 230 aa17.87■□□□□ 0.45
SMIM29-202ENST00000394990 GPSM2P81274 684 aa17.87■□□□□ 0.45
SMIM29-202ENST00000394990 NLRP10Q86W26 655 aa17.87■□□□□ 0.45
SMIM29-202ENST00000394990 CELF1Q92879 486 aaKnown RBP17.87■□□□□ 0.45
SMIM29-202ENST00000394990 PTPN22Q9Y2R2 807 aa17.87■□□□□ 0.45
SMIM29-202ENST00000394990 H0YGN5 161 aa17.86■□□□□ 0.45
SMIM29-202ENST00000394990 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMIM29-202ENST00000394990 THUMPD2Q9BTF0 503 aaKnown RBP17.86■□□□□ 0.45
SMIM29-202ENST00000394990 ERBB4Q15303 1308 aa17.86■□□□□ 0.45
SMIM29-202ENST00000394990 PDIA6Q15084 440 aa17.85■□□□□ 0.45
SMIM29-202ENST00000394990 AGBL3Q8NEM8 1001 aa17.85■□□□□ 0.45
SMIM29-202ENST00000394990 TBC1D16Q8TBP0 767 aa17.85■□□□□ 0.45
SMIM29-202ENST00000394990 MYOZ2Q9NPC6 264 aa17.85■□□□□ 0.45
SMIM29-202ENST00000394990 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
SMIM29-202ENST00000394990 PTPN12Q05209 780 aaKnown RBP17.84■□□□□ 0.45
SMIM29-202ENST00000394990 TTLL12Q14166 644 aaPredicted RBP17.84■□□□□ 0.45
SMIM29-202ENST00000394990 RSBN1LQ6PCB5 846 aaPredicted RBP17.84■□□□□ 0.45
SMIM29-202ENST00000394990 GMLQ99445 158 aa17.84■□□□□ 0.45
SMIM29-202ENST00000394990 EYA3Q99504 573 aa17.84■□□□□ 0.45
SMIM29-202ENST00000394990 ALDH1A1P00352 501 aa17.83■□□□□ 0.44
SMIM29-202ENST00000394990 CAP1Q01518 475 aa17.83■□□□□ 0.44
SMIM29-202ENST00000394990 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.44
SMIM29-202ENST00000394990 PROSER3Q2NL68 480 aa17.82■□□□□ 0.44
SMIM29-202ENST00000394990 SPRYD7Q5W111 196 aa17.82■□□□□ 0.44
SMIM29-202ENST00000394990 CHRDL2Q6WN34 429 aa17.82■□□□□ 0.44
SMIM29-202ENST00000394990 NECTIN2Q92692 538 aa17.82■□□□□ 0.44
SMIM29-202ENST00000394990 USP17L8P0C7I0 530 aa17.81■□□□□ 0.44
SMIM29-202ENST00000394990 NBPF9Q3BBW0 867 aa17.81■□□□□ 0.44
SMIM29-202ENST00000394990 IFNL1Q8IU54 200 aa17.81■□□□□ 0.44
SMIM29-202ENST00000394990 ZNF333Q96JL9 665 aa17.81■□□□□ 0.44
SMIM29-202ENST00000394990 ANXA1P04083 346 aa17.8■□□□□ 0.44
SMIM29-202ENST00000394990 TCIRG1Q13488 830 aa17.8■□□□□ 0.44
SMIM29-202ENST00000394990 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
SMIM29-202ENST00000394990 HSP90AB3PQ58FF7 597 aa17.8■□□□□ 0.44
SMIM29-202ENST00000394990 CD99L2Q8TCZ2 262 aa17.8■□□□□ 0.44
SMIM29-202ENST00000394990 ZC3H12CQ9C0D7 883 aaKnown RBP17.8■□□□□ 0.44
SMIM29-202ENST00000394990 RBM27Q9P2N5 1060 aaKnown RBP17.8■□□□□ 0.44
SMIM29-202ENST00000394990 IGF2BP3O00425 579 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMIM29-202ENST00000394990 U2AF1L5P0DN76 240 aaPredicted RBP17.79■□□□□ 0.44
SMIM29-202ENST00000394990 U2AF1Q01081 240 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMIM29-202ENST00000394990 LDLRAD1Q5T700 205 aa17.79■□□□□ 0.44
SMIM29-202ENST00000394990 ZNF428Q96B54 188 aa17.79■□□□□ 0.44
SMIM29-202ENST00000394990 ERO1AQ96HE7 468 aa17.79■□□□□ 0.44
SMIM29-202ENST00000394990 CFAP53Q96M91 514 aa17.79■□□□□ 0.44
SMIM29-202ENST00000394990 TMEM106CQ9BVX2 250 aa17.79■□□□□ 0.44
SMIM29-202ENST00000394990 PODXL2Q9NZ53 605 aa17.79■□□□□ 0.44
SMIM29-202ENST00000394990 EFCC1Q9HA90 598 aa17.78■□□□□ 0.44
SMIM29-202ENST00000394990 UNC80Q8N2C7 3258 aa17.78■□□□□ 0.44
SMIM29-202ENST00000394990 PSME4Q14997 1843 aa17.77■□□□□ 0.44
SMIM29-202ENST00000394990 MANSC4A6NHS7 340 aaPredicted RBP17.77■□□□□ 0.44
SMIM29-202ENST00000394990 NF2P35240 595 aa17.77■□□□□ 0.44
SMIM29-202ENST00000394990 INHBEP58166 350 aa17.77■□□□□ 0.44
SMIM29-202ENST00000394990 NUDCQ9Y266 331 aa17.77■□□□□ 0.44
SMIM29-202ENST00000394990 PRKG1Q13976 671 aa17.76■□□□□ 0.43
SMIM29-202ENST00000394990 COPS6Q7L5N1 327 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms