RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 PRDM11Q9NQV5 511 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 USP25Q9UHP3 1055 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 GOLGA6L19H0YKK7 550 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 SURF6O75683 361 aaKnown RBP6.83□□□□□ -1.32
MATR3-230ENST00000394800 MYL6BP14649 208 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 LRP10Q7Z4F1 713 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 DDX12PQ92771 950 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 LRRCC1Q9C099 1032 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 PPCSQ9HAB8 311 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 PRM3Q9NNZ6 103 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 SOS2Q07890 1332 aaPredicted RBP6.83□□□□□ -1.32
MATR3-230ENST00000394800 USP26Q9BXU7 913 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 KDM4CQ9H3R0 1056 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 DDX21Q9NR30 783 aaKnown RBP eCLIP6.83□□□□□ -1.32
MATR3-230ENST00000394800 SEPT11Q9NVA2 429 aaKnown RBP6.83□□□□□ -1.32
MATR3-230ENST00000394800 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.83□□□□□ -1.321e-323■■■□□ 17.6
MATR3-230ENST00000394800 TPX2Q9ULW0 747 aaKnown RBP6.83□□□□□ -1.32
MATR3-230ENST00000394800 ARIH1Q9Y4X5 557 aaPredicted RBP6.83□□□□□ -1.32
MATR3-230ENST00000394800 KIF5CO60282 957 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 POLA2Q14181 598 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 CCDC92Q53HC0 331 aaPredicted RBP6.83□□□□□ -1.32
MATR3-230ENST00000394800 SMYD5Q6GMV2 418 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 NUTM1Q86Y26 1132 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 CHCHD4Q8N4Q1 142 aa6.83□□□□□ -1.32
MATR3-230ENST00000394800 JARID2Q92833 1246 aaPredicted RBP6.83□□□□□ -1.32
MATR3-230ENST00000394800 PA2G4Q9UQ80 394 aaKnown RBP6.83□□□□□ -1.32
MATR3-230ENST00000394800 CPDO75976 1380 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 ABL2P42684 1182 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 SEMA3FQ13275 785 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 RNF187Q5TA31 235 aaPredicted RBP6.82□□□□□ -1.32
MATR3-230ENST00000394800 IFNL2Q8IZJ0 200 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 OVOS2A0A0G2JMS6 1433 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 KSR2Q6VAB6 950 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 HS6ST3Q8IZP7 471 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 ATL2Q8NHH9 583 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 TCHPQ9BT92 498 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 MX1P20591 662 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 PRPHP41219 470 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 MRGBPQ9NV56 204 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 KCNG1Q9UIX4 513 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 COPS6Q7L5N1 327 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 LIMCH1Q9UPQ0 1083 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 IKBKGQ9Y6K9 419 aa6.82□□□□□ -1.32
MATR3-230ENST00000394800 GTF2E1P29083 439 aaPredicted RBP6.81□□□□□ -1.32
MATR3-230ENST00000394800 LARP1Q6PKG0 1096 aaKnown RBP6.81□□□□□ -1.32
MATR3-230ENST00000394800 RHPN1Q8TCX5 695 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.81□□□□□ -1.324e-8■■■□□ 17.8
MATR3-230ENST00000394800 KIAA0754O94854 1291 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 DDIT3P35638 169 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 KLHDC4Q8TBB5 520 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 XAGE3Q8WTP9 111 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 SPATA32Q96LK8 384 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 WDR17Q8IZU2 1322 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 EPHA10Q5JZY3 1008 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 TOM1L2Q6ZVM7 507 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 SUCLG2Q96I99 432 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 FAM117AQ9C073 453 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 ZSWIM4Q9H7M6 989 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 SPG7Q9UQ90 795 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 GLI3P10071 1580 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 EPB41L2O43491 1005 aaKnown RBP6.81□□□□□ -1.32
MATR3-230ENST00000394800 DNAJA1P31689 397 aaKnown RBP6.81□□□□□ -1.32
MATR3-230ENST00000394800 ZNF131P52739 623 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 SNX21Q969T3 373 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 DCAF5Q96JK2 942 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 STRN4Q9NRL3 753 aa6.81□□□□□ -1.32
MATR3-230ENST00000394800 PKD1L3Q7Z443 1732 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 CCDC189A1A4V9 331 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 ERCC5P28715 1186 aaPredicted RBP6.8□□□□□ -1.32
MATR3-230ENST00000394800 SF3B2Q13435 895 aaKnown RBP6.8□□□□□ -1.32
MATR3-230ENST00000394800 TOMM20Q15388 145 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 CCDC125Q86Z20 511 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 FAM43AQ8N2R8 423 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 LINS1Q8NG48 757 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 RILPL2Q969X0 211 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 CCDC85AQ96PX6 553 aaPredicted RBP6.8□□□□□ -1.32
MATR3-230ENST00000394800 PDCL3Q9H2J4 239 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 C9orf78Q9NZ63 289 aaPredicted RBP6.8□□□□□ -1.32
MATR3-230ENST00000394800 MAGEC2Q9UBF1 373 aaPredicted RBP6.8□□□□□ -1.32
MATR3-230ENST00000394800 STAP2Q9UGK3 403 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 SMC3Q9UQE7 1217 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 COL5A2P05997 1499 aaPredicted RBP6.8□□□□□ -1.32
MATR3-230ENST00000394800 NBPF9Q3BBW0 867 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 PI4K2BQ8TCG2 481 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 MTA3Q9BTC8 594 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 NBPF26B4DH59 902 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 PPP2R5AQ15172 486 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 NBPF14Q5TI25 921 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 NBPF10Q6P3W6 841 aaKnown RBP6.8□□□□□ -1.32
MATR3-230ENST00000394800 NBPF15Q8N660 670 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 HYPKQ9NX55 129 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 ANAPC4Q9UJX5 808 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 PALD1Q9ULE6 856 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 U3KPZ7 1027 aaPredicted RBP6.8□□□□□ -1.32
MATR3-230ENST00000394800 GRM8O00222 908 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 MTX1Q13505 466 aa6.8□□□□□ -1.32
MATR3-230ENST00000394800 DDX54Q8TDD1 881 aaKnown RBP6.8□□□□□ -1.32
MATR3-230ENST00000394800 SREK1Q8WXA9 508 aaKnown RBP6.8□□□□□ -1.32
MATR3-230ENST00000394800 PTCD1O75127 700 aaKnown RBP6.79□□□□□ -1.32
MATR3-230ENST00000394800 GBP2P32456 591 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms