RNA–Protein interactions for RNA: ENST00000390884.1

RNU6-258P-201, Transcript of RNA, U6 small nuclear 258, pseudogene, humanhuman

BASIC

Gene RNU6-258P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-258P-201ENST00000390884 GTF2E1P29083 439 aaPredicted RBP0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 SSBP2P81877 361 aaPredicted RBP0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 SPRED3Q2MJR0 410 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 ZFYVE27Q5T4F4 411 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 ATXN7L2Q5T6C5 722 aaPredicted RBP0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 TMEM132EQ6IEE7 984 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 C20orf204Q6ZNR8 217 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 FAM20CQ8IXL6 584 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 AGGF1Q8N302 714 aaeCLIP0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 NUDT8Q8WV74 236 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 FOXJ1Q92949 421 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 SAMD11Q96NU1 681 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 TRIM8Q9BZR9 551 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 CRISPLD2Q9H0B8 497 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 HCN2Q9UL51 889 aa0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 ZFR2Q9UPR6 939 aaKnown RBP0.26□□□□□ -2.37
RNU6-258P-201ENST00000390884 STK25O00506 426 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 MAPTP10636 758 aaKnown RBP0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 RXRBP28702 533 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 C21orf58P58505 322 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 HILS1P60008 231 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 DLG4P78352 724 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 KCNH2Q12809 1159 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 BNIP3Q12983 259 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 SYCE2Q6PIF2 218 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 SLC23A3Q6PIS1 610 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 WFDC8Q8IUA0 241 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 DDX27Q96GQ7 796 aaKnown RBP0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 BBC3Q96PG8 261 aaPredicted RBP0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 EVA1BQ9NVM1 165 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 WWOXQ9NZC7 414 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 ZC3H7BQ9UGR2 993 aaKnown RBP0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 TSC22D4Q9Y3Q8 395 aa0.25□□□□□ -2.37
RNU6-258P-201ENST00000390884 SLC22A31A6NKX4 558 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 SPATA31C2B4DYI2 1134 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 PRR23D1E9PI22 279 aaPredicted RBP0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 NPIPB8E9PQR5 432 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 DLL1O00548 723 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 RGS9O75916 674 aaPredicted RBP0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 ITGB3P05106 788 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 PRR23D2P0DMB1 279 aaPredicted RBP0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 CD8BP10966 210 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 BMP5P22003 454 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 MCM7P33993 719 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 TBC1D8BQ0IIM8 1120 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 FHL3Q13643 280 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 COL9A2Q14055 689 aaPredicted RBP0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 ANGEL2Q5VTE6 544 aaKnown RBP0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 FYB2Q5VWT5 728 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 AMER2Q8N7J2 671 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 SMRP1Q8NCR6 262 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 SMG7Q92540 1137 aaKnown RBP0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 TNFRSF25Q93038 417 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 PPP1R10Q96QC0 940 aaKnown RBP0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 ZCCHC2Q9C0B9 1178 aaKnown RBP0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 CDHR5Q9HBB8 845 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 MARK1Q9P0L2 795 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 MAP10Q9P2G4 905 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 ATP1B4Q9UN42 357 aaPredicted RBP0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 HIF3AQ9Y2N7 669 aa0.24□□□□□ -2.37
RNU6-258P-201ENST00000390884 GAS2O43903 313 aaKnown RBP0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 CBFA2T3O75081 653 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 ZFPL1O95159 310 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 HOXD8P13378 290 aaPredicted RBP0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 CD38P28907 300 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 CTHP32929 405 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 PHKA2P46019 1235 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 GCGRP47871 477 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 KCNC1P48547 511 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 AFF1P51825 1210 aaKnown RBP0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 GDF10P55107 478 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 CYP27A1Q02318 531 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 HYAL1Q12794 435 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 CYFIP1Q7L576 1253 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 FERMT3Q86UX7 667 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 SCARB1Q8WTV0 552 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 FAM46AQ96IP4 442 aaKnown RBP0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 KRTAP3-1Q9BYR8 98 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 MDFICQ9P1T7 246 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 GJA3Q9Y6H8 435 aa0.23□□□□□ -2.37
RNU6-258P-201ENST00000390884 DDX11L8A8MPP1 907 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 SEMA7AO75326 666 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 ZNF202O95125 648 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 PI3P19957 117 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 MSX1P28360 303 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 CCKBRP32239 447 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 TNP2Q05952 138 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 PKD2Q13563 968 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 VMACQ2NL98 169 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 GNASQ5JWF2 1037 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 RUSC1-AS1Q66K80 236 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 PAOXQ6QHF9 649 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 NLRP8Q86W28 1048 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 TBC1D32Q96NH3 1257 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 MDFIQ99750 246 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 LARP6Q9BRS8 491 aaKnown RBP0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 CTNND2Q9UQB3 1225 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 IRAK3Q9Y616 596 aa0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 SYNE2Q8WXH0 6885 aaKnown RBP0.22□□□□□ -2.37
RNU6-258P-201ENST00000390884 NOTCH3Q9UM47 2321 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms