RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 DGKZQ13574 1117 aa8.41□□□□□ -1.06
TRAV35-201ENST00000390462 TJAP1Q5JTD0 557 aa8.41□□□□□ -1.06
TRAV35-201ENST00000390462 POTEAQ6S8J7 498 aa8.41□□□□□ -1.06
TRAV35-201ENST00000390462 ZNF296Q8WUU4 475 aaPredicted RBP8.41□□□□□ -1.06
TRAV35-201ENST00000390462 ZNF516Q92618 1163 aa8.41□□□□□ -1.06
TRAV35-201ENST00000390462 KCTD15Q96SI1 283 aaPredicted RBP8.41□□□□□ -1.06
TRAV35-201ENST00000390462 A0A0U1RQG5 324 aaPredicted RBP8.4□□□□□ -1.06
TRAV35-201ENST00000390462 MINDY4BA8MYZ0 360 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 ERVH48-1M5A8F1 160 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 PDPK1O15530 556 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 RASGRF1Q13972 1273 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 SAFB2Q14151 953 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRAV35-201ENST00000390462 MTFR1Q15390 333 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 TNNI3KQ59H18 835 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 NXPE4Q6UWF7 544 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 CELF2-AS1Q8N7Q2 184 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 ZNF511Q8NB15 262 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 IL17RAQ96F46 866 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 NT5C1AQ9BXI3 368 aa8.4□□□□□ -1.06
TRAV35-201ENST00000390462 SRRTQ9BXP5 876 aaKnown RBP8.4□□□□□ -1.06
TRAV35-201ENST00000390462 POTECB2RU33 542 aa8.39□□□□□ -1.07
TRAV35-201ENST00000390462 TSPAN6O43657 245 aa8.39□□□□□ -1.07
TRAV35-201ENST00000390462 CNGA1P29973 690 aa8.39□□□□□ -1.07
TRAV35-201ENST00000390462 GBP2P32456 591 aaPredicted RBP8.39□□□□□ -1.07
TRAV35-201ENST00000390462 SMTNP53814 917 aa8.39□□□□□ -1.07
TRAV35-201ENST00000390462 PTPN5P54829 565 aa8.39□□□□□ -1.07
TRAV35-201ENST00000390462 TCEA2Q15560 299 aa8.39□□□□□ -1.07
TRAV35-201ENST00000390462 NFE2Q16621 373 aaPredicted RBP8.39□□□□□ -1.07
TRAV35-201ENST00000390462 RTN1Q16799 776 aa8.39□□□□□ -1.07
TRAV35-201ENST00000390462 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
TRAV35-201ENST00000390462 CLEC4GQ6UXB4 293 aa8.39□□□□□ -1.07
TRAV35-201ENST00000390462 KLK14Q9P0G3 267 aa8.39□□□□□ -1.07
TRAV35-201ENST00000390462 CCDC189A1A4V9 331 aa8.38□□□□□ -1.07
TRAV35-201ENST00000390462 LDHAP00338 332 aaKnown RBP8.38□□□□□ -1.07
TRAV35-201ENST00000390462 KRT18P05783 430 aaKnown RBP8.38□□□□□ -1.07
TRAV35-201ENST00000390462 EPHB1P54762 984 aa8.38□□□□□ -1.07
TRAV35-201ENST00000390462 FOXD4Q12950 439 aaPredicted RBP8.38□□□□□ -1.07
TRAV35-201ENST00000390462 C2orf27AQ580R0 203 aa8.38□□□□□ -1.07
TRAV35-201ENST00000390462 DALRD3Q5D0E6 543 aaKnown RBP8.38□□□□□ -1.07
TRAV35-201ENST00000390462 INTS6LQ5JSJ4 861 aaKnown RBP8.38□□□□□ -1.07
TRAV35-201ENST00000390462 PCNX4Q63HM2 1172 aa8.38□□□□□ -1.07
TRAV35-201ENST00000390462 TMTC2Q8N394 836 aa8.38□□□□□ -1.07
TRAV35-201ENST00000390462 SLC39A13Q96H72 371 aa8.38□□□□□ -1.07
TRAV35-201ENST00000390462 SCYL1Q96KG9 808 aa8.38□□□□□ -1.07
TRAV35-201ENST00000390462 TMEM74Q96NL1 305 aa8.38□□□□□ -1.07
TRAV35-201ENST00000390462 MPHOSPH6Q99547 160 aaKnown RBP8.38□□□□□ -1.07
TRAV35-201ENST00000390462 BCO2Q9BYV7 579 aa8.38□□□□□ -1.07
TRAV35-201ENST00000390462 F6X3S4 739 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 KCNQ2O43526 872 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 ALDH1L1O75891 902 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 S1PR4O95977 384 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 HIRAP54198 1017 aaPredicted RBP8.37□□□□□ -1.07
TRAV35-201ENST00000390462 WNT7BP56706 349 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 DHX8Q14562 1220 aaKnown RBP8.37□□□□□ -1.07
TRAV35-201ENST00000390462 DDR2Q16832 855 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 ESCO1Q5FWF5 840 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 TREML1Q86YW5 311 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 ALDH16A1Q8IZ83 802 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 SAMD3Q8N6K7 520 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 THAP3Q8WTV1 239 aaPredicted RBP8.37□□□□□ -1.07
TRAV35-201ENST00000390462 SHDQ96IW2 340 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 PLCD4Q9BRC7 762 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 ST7Q9NRC1 585 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 FAM13BQ9NYF5 915 aa8.37□□□□□ -1.07
TRAV35-201ENST00000390462 FOXD3Q9UJU5 478 aaPredicted RBP8.37□□□□□ -1.07
TRAV35-201ENST00000390462 FCF1Q9Y324 198 aaKnown RBP8.37□□□□□ -1.07
TRAV35-201ENST00000390462 SERTM1A2A2V5 107 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 ALG1L2C9J202 215 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 EML1O00423 815 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 CDK2AP1O14519 115 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 POU3F3P20264 500 aaPredicted RBP8.36□□□□□ -1.07
TRAV35-201ENST00000390462 PPP2R5AQ15172 486 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 VPS72Q15906 364 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 SYNPOQ8N3V7 929 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 JMYQ8N9B5 988 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 FAM126AQ9BYI3 521 aaPredicted RBP8.36□□□□□ -1.07
TRAV35-201ENST00000390462 RBSNQ9H1K0 784 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 ARNT2Q9HBZ2 717 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 KCNQ5Q9NR82 932 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 PLAAQ9Y263 795 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 NESP48681 1621 aa8.36□□□□□ -1.07
TRAV35-201ENST00000390462 TNFRSF21O75509 655 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 ASMTLO95671 621 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 GNRH1P01148 92 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 PMLP29590 882 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 GSTT1P30711 240 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 TTF1Q15361 905 aaPredicted RBP8.35□□□□□ -1.07
TRAV35-201ENST00000390462 SYCP2LQ5T4T6 812 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 FBXL19Q6PCT2 694 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 DDX42Q86XP3 938 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRAV35-201ENST00000390462 CHAC2Q8WUX2 184 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 TRIM52Q96A61 297 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 ZFYVE28Q9HCC9 887 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 SFMBT1Q9UHJ3 866 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 HCN4Q9Y3Q4 1203 aa8.35□□□□□ -1.07
TRAV35-201ENST00000390462 RGS20O76081 388 aa8.34□□□□□ -1.07
TRAV35-201ENST00000390462 MYL1P05976 194 aa8.34□□□□□ -1.07
TRAV35-201ENST00000390462 CCDC85BQ15834 202 aaPredicted RBP8.34□□□□□ -1.07
TRAV35-201ENST00000390462 SH3PXD2AQ5TCZ1 1133 aa8.34□□□□□ -1.07
TRAV35-201ENST00000390462 PPP4R4Q6NUP7 873 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms