RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 CAMTA1Q9Y6Y1 1673 aa9.58□□□□□ -0.88
TRBV28-201ENST00000390400 NWD2Q9ULI1 1742 aa9.57□□□□□ -0.88
TRBV28-201ENST00000390400 IL13P35225 146 aa9.57□□□□□ -0.88
TRBV28-201ENST00000390400 MCCD1P59942 119 aaPredicted RBP9.57□□□□□ -0.88
TRBV28-201ENST00000390400 EIF4A2Q14240 407 aaKnown RBP9.57□□□□□ -0.88
TRBV28-201ENST00000390400 WDR43Q15061 677 aaKnown RBP eCLIP9.57□□□□□ -0.88
TRBV28-201ENST00000390400 MAP7D1Q3KQU3 841 aa9.57□□□□□ -0.88
TRBV28-201ENST00000390400 DZIP3Q86Y13 1208 aaKnown RBP9.57□□□□□ -0.88
TRBV28-201ENST00000390400 ANKRD24Q8TF21 1146 aa9.57□□□□□ -0.88
TRBV28-201ENST00000390400 NGLY1Q96IV0 654 aa9.57□□□□□ -0.88
TRBV28-201ENST00000390400 SLC6A16Q9GZN6 736 aa9.57□□□□□ -0.88
TRBV28-201ENST00000390400 BTG4Q9NY30 223 aa9.57□□□□□ -0.88
TRBV28-201ENST00000390400 COL5A2P05997 1499 aaPredicted RBP9.57□□□□□ -0.88
TRBV28-201ENST00000390400 FAM208AQ9UK61 1670 aaKnown RBP9.56□□□□□ -0.88
TRBV28-201ENST00000390400 U2SURPO15042 1029 aaKnown RBP9.56□□□□□ -0.88
TRBV28-201ENST00000390400 S1PR4O95977 384 aa9.56□□□□□ -0.88
TRBV28-201ENST00000390400 EVA1CP58658 441 aa9.56□□□□□ -0.88
TRBV28-201ENST00000390400 EML3Q32P44 896 aa9.56□□□□□ -0.88
TRBV28-201ENST00000390400 OXLD1Q5BKU9 147 aa9.56□□□□□ -0.88
TRBV28-201ENST00000390400 STRN4Q9NRL3 753 aa9.56□□□□□ -0.88
TRBV28-201ENST00000390400 DNAAF2Q9NVR5 837 aaKnown RBP9.56□□□□□ -0.88
TRBV28-201ENST00000390400 SLIT2O94813 1529 aa9.56□□□□□ -0.88
TRBV28-201ENST00000390400 SFI1A8K8P3 1242 aa9.55□□□□□ -0.88
TRBV28-201ENST00000390400 LZTS3O60299 673 aaPredicted RBP9.55□□□□□ -0.88
TRBV28-201ENST00000390400 U2AF1L5P0DN76 240 aaPredicted RBP9.55□□□□□ -0.88
TRBV28-201ENST00000390400 ATP2B4P23634 1241 aa9.55□□□□□ -0.88
TRBV28-201ENST00000390400 U2AF1Q01081 240 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRBV28-201ENST00000390400 FAM43AQ8N2R8 423 aa9.55□□□□□ -0.88
TRBV28-201ENST00000390400 PCDHGA11Q9Y5H2 935 aa9.55□□□□□ -0.88
TRBV28-201ENST00000390400 NRAPQ86VF7 1730 aa9.55□□□□□ -0.88
TRBV28-201ENST00000390400 RGPD2P0DJD1 1756 aa9.55□□□□□ -0.88
TRBV28-201ENST00000390400 WDR17Q8IZU2 1322 aa9.55□□□□□ -0.88
TRBV28-201ENST00000390400 RGPD1P0DJD0 1748 aa9.54□□□□□ -0.88
TRBV28-201ENST00000390400 PPEF1O14829 653 aaPredicted RBP9.54□□□□□ -0.88
TRBV28-201ENST00000390400 PTPN5P54829 565 aa9.54□□□□□ -0.88
TRBV28-201ENST00000390400 OCLNQ16625 522 aa9.54□□□□□ -0.88
TRBV28-201ENST00000390400 ZNF511Q8NB15 262 aa9.54□□□□□ -0.88
TRBV28-201ENST00000390400 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
TRBV28-201ENST00000390400 PNISRQ8TF01 805 aaKnown RBP9.54□□□□□ -0.88
TRBV28-201ENST00000390400 NLRP2Q9NX02 1062 aa9.54□□□□□ -0.88
TRBV28-201ENST00000390400 DOLKQ9UPQ8 538 aa9.54□□□□□ -0.88
TRBV28-201ENST00000390400 FCF1Q9Y324 198 aaKnown RBP9.54□□□□□ -0.88
TRBV28-201ENST00000390400 AFF2P51816 1311 aa9.54□□□□□ -0.88
TRBV28-201ENST00000390400 IGSF1Q8N6C5 1336 aa9.54□□□□□ -0.88
TRBV28-201ENST00000390400 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.53□□□□□ -0.88
TRBV28-201ENST00000390400 UNCXA6NJT0 531 aa9.53□□□□□ -0.88
TRBV28-201ENST00000390400 DNAJC14Q6Y2X3 702 aaPredicted RBP9.53□□□□□ -0.88
TRBV28-201ENST00000390400 TOM1L2Q6ZVM7 507 aa9.53□□□□□ -0.88
TRBV28-201ENST00000390400 UNC5CLQ8IV45 518 aa9.53□□□□□ -0.88
TRBV28-201ENST00000390400 SIX5Q8N196 739 aa9.53□□□□□ -0.88
TRBV28-201ENST00000390400 PRIMPOLQ96LW4 560 aa9.53□□□□□ -0.88
TRBV28-201ENST00000390400 C1QTNF2Q9BXJ5 285 aa9.53□□□□□ -0.88
TRBV28-201ENST00000390400 USP21Q9UK80 565 aa9.53□□□□□ -0.88
TRBV28-201ENST00000390400 NOD1Q9Y239 953 aa9.53□□□□□ -0.88
TRBV28-201ENST00000390400 CRB1P82279 1406 aa9.53□□□□□ -0.88
TRBV28-201ENST00000390400 BCL9LQ86UU0 1499 aa9.53□□□□□ -0.88
TRBV28-201ENST00000390400 ESPNB1AK53 854 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 PRMT3O60678 531 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 ARID4AP29374 1257 aaPredicted RBP9.52□□□□□ -0.89
TRBV28-201ENST00000390400 SH3BP2P78314 561 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 GTF2IP78347 998 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 PDE3BQ13370 1112 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 SULT6B1Q6IMI4 303 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 FAM9BQ8IZU0 186 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 USHBP1Q8N6Y0 703 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 CARD10Q9BWT7 1032 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 IL21Q9HBE4 155 aa9.52□□□□□ -0.89
TRBV28-201ENST00000390400 NCAPD2Q15021 1401 aa9.51□□□□□ -0.89
TRBV28-201ENST00000390400 SOWAHDA6NJG2 315 aa9.51□□□□□ -0.89
TRBV28-201ENST00000390400 HMOX1P09601 288 aa9.51□□□□□ -0.89
TRBV28-201ENST00000390400 B4GALNT3Q6L9W6 998 aa9.51□□□□□ -0.89
TRBV28-201ENST00000390400 LARGE2Q8N3Y3 721 aa9.51□□□□□ -0.89
TRBV28-201ENST00000390400 PNNQ9H307 717 aaKnown RBP9.51□□□□□ -0.89
TRBV28-201ENST00000390400 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
TRBV28-201ENST00000390400 KDRP35968 1356 aa9.5□□□□□ -0.89
TRBV28-201ENST00000390400 VPS72Q15906 364 aa9.5□□□□□ -0.89
TRBV28-201ENST00000390400 SWI5Q1ZZU3 235 aa9.5□□□□□ -0.89
TRBV28-201ENST00000390400 PLA2G2CQ5R387 149 aa9.5□□□□□ -0.89
TRBV28-201ENST00000390400 CCDC102BQ68D86 513 aa9.5□□□□□ -0.89
TRBV28-201ENST00000390400 CAPN12Q6ZSI9 719 aa9.5□□□□□ -0.89
TRBV28-201ENST00000390400 BPHLQ86WA6 291 aaPredicted RBP9.5□□□□□ -0.89
TRBV28-201ENST00000390400 SPATA31A5Q5VU36 1347 aa9.5□□□□□ -0.89
TRBV28-201ENST00000390400 SPATA31A7Q8IWB4 1347 aa9.5□□□□□ -0.89
TRBV28-201ENST00000390400 ATRNO75882 1429 aa9.49□□□□□ -0.89
TRBV28-201ENST00000390400 NEFMP07197 916 aa9.49□□□□□ -0.89
TRBV28-201ENST00000390400 PRKAR2BP31323 418 aa9.49□□□□□ -0.89
TRBV28-201ENST00000390400 AGERQ15109 404 aa9.49□□□□□ -0.89
TRBV28-201ENST00000390400 ZNF772Q68DY9 489 aaPredicted RBP9.49□□□□□ -0.89
TRBV28-201ENST00000390400 TRIM50Q86XT4 487 aa9.49□□□□□ -0.89
TRBV28-201ENST00000390400 TCP11L2Q8N4U5 519 aa9.49□□□□□ -0.89
TRBV28-201ENST00000390400 TPCN2Q8NHX9 752 aa9.49□□□□□ -0.89
TRBV28-201ENST00000390400 RAPGEF4Q8WZA2 1011 aa9.49□□□□□ -0.89
TRBV28-201ENST00000390400 PURBQ96QR8 312 aaKnown RBP9.49□□□□□ -0.89
TRBV28-201ENST00000390400 TRPC5Q9UL62 973 aaPredicted RBP9.49□□□□□ -0.89
TRBV28-201ENST00000390400 SPATA31A1Q5TZJ5 1347 aa9.49□□□□□ -0.89
TRBV28-201ENST00000390400 MAPK8IP3Q9UPT6 1336 aa9.49□□□□□ -0.89
TRBV28-201ENST00000390400 WNK3Q9BYP7 1800 aa9.48□□□□□ -0.89
TRBV28-201ENST00000390400 STAU1O95793 577 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms