RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 TMED8Q6PL24 325 aaPredicted RBP6.49□□□□□ -1.37
GEN1-202ENST00000381254 CEP57L1Q8IYX8 460 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 RASSF8Q8NHQ8 419 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 SLC12A5Q9H2X9 1139 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 LRRFIP2Q9Y608 721 aaKnown RBP6.49□□□□□ -1.37
GEN1-202ENST00000381254 IVNS1ABPQ9Y6Y0 642 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 BMP15O95972 392 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 MYCP01106 439 aaPredicted RBP6.49□□□□□ -1.37
GEN1-202ENST00000381254 TFRCP02786 760 aaKnown RBP6.49□□□□□ -1.37
GEN1-202ENST00000381254 ATL3Q6DD88 541 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 SAMD1Q6SPF0 538 aaPredicted RBP6.49□□□□□ -1.37
GEN1-202ENST00000381254 ZNF804AQ7Z570 1209 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 BICD2Q8TD16 824 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 NOC3LQ8WTT2 800 aaKnown RBP6.49□□□□□ -1.37
GEN1-202ENST00000381254 SNX21Q969T3 373 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 GBA2Q9HCG7 927 aaPredicted RBP6.49□□□□□ -1.37
GEN1-202ENST00000381254 KIF24Q5T7B8 1368 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 PPP4R3BQ5MIZ7 849 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 SLC4A10Q6U841 1118 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 NACAP1Q9BZK3 213 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.49□□□□□ -1.376e-7■■■■□ 21.1
GEN1-202ENST00000381254 GGA1Q9UJY5 639 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 BRIP1Q9BX63 1249 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 KIF20AO95235 890 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 DLGAP5Q15398 846 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 SLC9C1Q4G0N8 1177 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 CCDC83Q8IWF9 413 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 HMG20BQ9P0W2 317 aa6.49□□□□□ -1.37
GEN1-202ENST00000381254 CAVIN4Q5BKX8 364 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 ANKRD18AQ8IVF6 992 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 LRRCC1Q9C099 1032 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 HMOX1P09601 288 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 SOX10P56693 466 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 FKBP4Q02790 459 aaKnown RBP eCLIP6.48□□□□□ -1.37
GEN1-202ENST00000381254 TRAF1Q13077 416 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 COA7Q96BR5 231 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 PRIMPOLQ96LW4 560 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 SPC25Q9HBM1 224 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 CCDC196A0A1B0GTZ2 297 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 CHRNA5P30532 468 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 GSDMDP57764 484 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 STIM1Q13586 685 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 APOBEC3FQ8IUX4 373 aaKnown RBP6.48□□□□□ -1.37
GEN1-202ENST00000381254 DDX19AQ9NUU7 478 aaKnown RBP6.48□□□□□ -1.37
GEN1-202ENST00000381254 PLIN1O60240 522 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 GPTP24298 496 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 NT5C2P49902 561 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 WASHC4Q2M389 1173 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 CHD1LQ86WJ1 897 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 ZNHIT6Q9NWK9 470 aaKnown RBP6.48□□□□□ -1.37
GEN1-202ENST00000381254 KIF1BO60333 1816 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 CPDO75976 1380 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 POLR3GO15318 223 aaPredicted RBP6.48□□□□□ -1.37
GEN1-202ENST00000381254 HOXA7P31268 230 aaPredicted RBP6.48□□□□□ -1.37
GEN1-202ENST00000381254 CCDC129Q6ZRS4 1044 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 TRIM22Q8IYM9 498 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 EFCC1Q9HA90 598 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 TMOD4Q9NZQ9 345 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 TRIM17Q9Y577 477 aa6.48□□□□□ -1.37
GEN1-202ENST00000381254 TRPA1O75762 1119 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 SYMPKQ92797 1274 aaKnown RBP6.47□□□□□ -1.37
GEN1-202ENST00000381254 ANKRD2Q9GZV1 360 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 CEP131Q9UPN4 1083 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 ESPNB1AK53 854 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 ARHGEF1Q92888 912 aaKnown RBP6.47□□□□□ -1.37
GEN1-202ENST00000381254 KIF1BPQ96EK5 621 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 ECM2O94769 699 aaPredicted RBP6.47□□□□□ -1.37
GEN1-202ENST00000381254 RILPL2Q969X0 211 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 ZNF287Q9HBT7 754 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 NOL7Q9UMY1 257 aaKnown RBP6.47□□□□□ -1.37
GEN1-202ENST00000381254 ERBB3P21860 1342 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 CCDC178Q5BJE1 867 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 USP48Q86UV5 1035 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 TRIM47Q96LD4 638 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 ZSCAN12O43309 604 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 EVI5O60447 810 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 RASSF7Q02833 373 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 NOL8Q76FK4 1167 aaKnown RBP6.47□□□□□ -1.37
GEN1-202ENST00000381254 UBR1Q8IWV7 1749 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 SHPRHQ149N8 1683 aa6.47□□□□□ -1.37
GEN1-202ENST00000381254 RTL1A6NKG5 1358 aa6.46□□□□□ -1.37
GEN1-202ENST00000381254 CARMIL3Q8ND23 1372 aa6.46□□□□□ -1.37
GEN1-202ENST00000381254 PNPLA7Q6ZV29 1317 aa6.46□□□□□ -1.37
GEN1-202ENST00000381254 RAD50Q92878 1312 aa6.46□□□□□ -1.37
GEN1-202ENST00000381254 HOXB7P09629 217 aa6.46□□□□□ -1.37
GEN1-202ENST00000381254 SDF4Q9BRK5 362 aa6.46□□□□□ -1.37
GEN1-202ENST00000381254 ZNF277Q9NRM2 450 aaPredicted RBP6.46□□□□□ -1.37
GEN1-202ENST00000381254 U3KPZ7 1027 aaPredicted RBP6.46□□□□□ -1.37
GEN1-202ENST00000381254 RUFY1Q96T51 708 aa6.46□□□□□ -1.37
GEN1-202ENST00000381254 NRXN1Q9ULB1 1477 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 UFL1O94874 794 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 SMC2O95347 1197 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 KLHL40Q2TBA0 621 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 JAKMIP3Q5VZ66 844 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 CRACR2BQ8N4Y2 399 aaPredicted RBP6.46□□□□□ -1.38
GEN1-202ENST00000381254 NARFQ9UHQ1 456 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 SETBP1Q9Y6X0 1596 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 A6NNZ2 444 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 TUBB8Q3ZCM7 444 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 FMNL3Q8IVF7 1028 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms