RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 USPL1Q5W0Q7 1092 aa13.88□□□□□ -0.19
PITRM1-202ENST00000380989 USP48Q86UV5 1035 aa13.88□□□□□ -0.19
PITRM1-202ENST00000380989 TRMT112Q9UI30 125 aaKnown RBP13.88□□□□□ -0.19
PITRM1-202ENST00000380989 NUP98P52948 1817 aa13.88□□□□□ -0.19
PITRM1-202ENST00000380989 IBTKQ9P2D0 1353 aaPredicted RBP13.88□□□□□ -0.19
PITRM1-202ENST00000380989 LRRCC1Q9C099 1032 aa13.88□□□□□ -0.19
PITRM1-202ENST00000380989 CNPY2Q9Y2B0 182 aa13.88□□□□□ -0.19
PITRM1-202ENST00000380989 APBA3O96018 575 aa13.88□□□□□ -0.19
PITRM1-202ENST00000380989 NIP7Q9Y221 180 aaKnown RBP eCLIP13.88□□□□□ -0.19
PITRM1-202ENST00000380989 TRIM6-TRIM34B2RNG4 842 aa13.87□□□□□ -0.19
PITRM1-202ENST00000380989 ADCY5O95622 1261 aa13.87□□□□□ -0.19
PITRM1-202ENST00000380989 KIAA2012Q0VF49 1180 aa13.87□□□□□ -0.19
PITRM1-202ENST00000380989 GIMAP6Q6P9H5 292 aa13.87□□□□□ -0.19
PITRM1-202ENST00000380989 RHPN1Q8TCX5 695 aa13.87□□□□□ -0.19
PITRM1-202ENST00000380989 TSPY26PQ9H489 355 aa13.87□□□□□ -0.19
PITRM1-202ENST00000380989 CCDC39Q9UFE4 941 aa13.87□□□□□ -0.19
PITRM1-202ENST00000380989 DYNC1I1O14576 645 aa13.87□□□□□ -0.19
PITRM1-202ENST00000380989 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
PITRM1-202ENST00000380989 BCL2L12Q9HB09 334 aa13.86□□□□□ -0.19
PITRM1-202ENST00000380989 FIBPO43427 364 aa13.86□□□□□ -0.19
PITRM1-202ENST00000380989 SASH1O94885 1247 aa13.86□□□□□ -0.19
PITRM1-202ENST00000380989 MTX1Q13505 466 aa13.86□□□□□ -0.19
PITRM1-202ENST00000380989 PYCARDQ9ULZ3 195 aa13.86□□□□□ -0.19
PITRM1-202ENST00000380989 NOLC1Q14978 699 aaKnown RBP eCLIP13.85□□□□□ -0.19
PITRM1-202ENST00000380989 TBC1D9BQ66K14 1250 aa13.85□□□□□ -0.19
PITRM1-202ENST00000380989 ZNF34Q8IZ26 560 aa13.85□□□□□ -0.19
PITRM1-202ENST00000380989 PUS3Q9BZE2 481 aaKnown RBP13.85□□□□□ -0.19
PITRM1-202ENST00000380989 RFX5P48382 616 aaPredicted RBP13.85□□□□□ -0.19
PITRM1-202ENST00000380989 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
PITRM1-202ENST00000380989 COL9A3Q14050 684 aaPredicted RBP13.85□□□□□ -0.19
PITRM1-202ENST00000380989 TXNRD1Q16881 649 aa13.85□□□□□ -0.19
PITRM1-202ENST00000380989 ZBTB38Q8NAP3 1195 aaPredicted RBP13.85□□□□□ -0.19
PITRM1-202ENST00000380989 AK7Q96M32 723 aa13.85□□□□□ -0.19
PITRM1-202ENST00000380989 TLR7Q9NYK1 1049 aaKnown RBP13.85□□□□□ -0.19
PITRM1-202ENST00000380989 RTCBQ9Y3I0 505 aaKnown RBP13.85□□□□□ -0.19
PITRM1-202ENST00000380989 LRRC24Q50LG9 513 aa13.84□□□□□ -0.19
PITRM1-202ENST00000380989 FAM173BQ6P4H8 233 aa13.84□□□□□ -0.19
PITRM1-202ENST00000380989 LY75O60449 1722 aa13.84□□□□□ -0.19
PITRM1-202ENST00000380989 CNTNAP4Q9C0A0 1308 aa13.84□□□□□ -0.19
PITRM1-202ENST00000380989 ERVV-1B6SEH8 477 aa13.84□□□□□ -0.19
PITRM1-202ENST00000380989 IRS4O14654 1257 aaPredicted RBP13.84□□□□□ -0.19
PITRM1-202ENST00000380989 CCDC94Q9BW85 323 aaPredicted RBP13.84□□□□□ -0.19
PITRM1-202ENST00000380989 CCDC8Q9H0W5 538 aaPredicted RBP13.84□□□□□ -0.19
PITRM1-202ENST00000380989 RPS6KA4O75676 772 aa13.84□□□□□ -0.19
PITRM1-202ENST00000380989 RABL6Q3YEC7 729 aaPredicted RBP13.84□□□□□ -0.19
PITRM1-202ENST00000380989 TAF1LQ8IZX4 1826 aa13.83□□□□□ -0.19
PITRM1-202ENST00000380989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.83□□□□□ -0.2
PITRM1-202ENST00000380989 GREM2Q9H772 168 aa13.83□□□□□ -0.2
PITRM1-202ENST00000380989 PCCAP05165 728 aaPredicted RBP13.83□□□□□ -0.2
PITRM1-202ENST00000380989 PTMSP20962 102 aa13.83□□□□□ -0.2
PITRM1-202ENST00000380989 TRIM28Q13263 835 aaKnown RBP13.83□□□□□ -0.2
PITRM1-202ENST00000380989 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
PITRM1-202ENST00000380989 MYRIPQ8NFW9 859 aa13.83□□□□□ -0.2
PITRM1-202ENST00000380989 ERC2O15083 957 aa13.82□□□□□ -0.2
PITRM1-202ENST00000380989 BRD1O95696 1058 aa13.82□□□□□ -0.2
PITRM1-202ENST00000380989 PDE1AP54750 535 aa13.82□□□□□ -0.2
PITRM1-202ENST00000380989 TFCP2Q12800 502 aa13.82□□□□□ -0.2
PITRM1-202ENST00000380989 G3BP1Q13283 466 aaKnown RBP eCLIP13.82□□□□□ -0.2
PITRM1-202ENST00000380989 C4BP0C0L5 1744 aa13.82□□□□□ -0.2
PITRM1-202ENST00000380989 ZNF827Q17R98 1081 aa13.82□□□□□ -0.2
PITRM1-202ENST00000380989 KCNF1Q9H3M0 494 aa13.82□□□□□ -0.2
PITRM1-202ENST00000380989 RREB1Q92766 1687 aa13.82□□□□□ -0.2
PITRM1-202ENST00000380989 ZPR1O75312 459 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 CAMK4Q16566 473 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 HSP90AB3PQ58FF7 597 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 EAF2Q96CJ1 260 aaPredicted RBP13.81□□□□□ -0.2
PITRM1-202ENST00000380989 NDUFB9Q9Y6M9 179 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 MX1P20591 662 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 RFC4P35249 363 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 ERFEQ4G0M1 354 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 HS1BP3Q53T59 392 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 AACSQ86V21 672 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 SMAP1Q8IYB5 467 aaPredicted RBP13.81□□□□□ -0.2
PITRM1-202ENST00000380989 KIF1BPQ96EK5 621 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 RIOK3O14730 519 aaKnown RBP13.81□□□□□ -0.2
PITRM1-202ENST00000380989 EN1Q05925 392 aaPredicted RBP13.81□□□□□ -0.2
PITRM1-202ENST00000380989 TRAPPC3LQ5T215 181 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 SLC51AQ86UW1 340 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 SEC31BQ9NQW1 1179 aa13.81□□□□□ -0.2
PITRM1-202ENST00000380989 LRMPQ12912 555 aa13.8□□□□□ -0.2
PITRM1-202ENST00000380989 TTLL11Q8NHH1 800 aa13.8□□□□□ -0.2
PITRM1-202ENST00000380989 ANKRD36CQ5JPF3 1778 aa13.8□□□□□ -0.2
PITRM1-202ENST00000380989 NTSR2O95665 410 aa13.8□□□□□ -0.2
PITRM1-202ENST00000380989 CSPP1Q1MSJ5 1256 aa13.8□□□□□ -0.2
PITRM1-202ENST00000380989 RC3H1Q5TC82 1133 aaKnown RBP13.8□□□□□ -0.2
PITRM1-202ENST00000380989 UTP14AQ9BVJ6 771 aaKnown RBP13.8□□□□□ -0.2
PITRM1-202ENST00000380989 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.8□□□□□ -0.2
PITRM1-202ENST00000380989 V9GYY5 206 aaPredicted RBP13.8□□□□□ -0.2
PITRM1-202ENST00000380989 SALL3Q9BXA9 1300 aa13.8□□□□□ -0.2
PITRM1-202ENST00000380989 LARGE1O95461 756 aa13.8□□□□□ -0.2
PITRM1-202ENST00000380989 DMTNQ08495 405 aa13.8□□□□□ -0.2
PITRM1-202ENST00000380989 NARFQ9UHQ1 456 aa13.8□□□□□ -0.2
PITRM1-202ENST00000380989 A0A087WWV3 80 aa13.79□□□□□ -0.2
PITRM1-202ENST00000380989 VGLL3A8MV65 326 aa13.79□□□□□ -0.2
PITRM1-202ENST00000380989 SNAP23O00161 211 aa13.79□□□□□ -0.2
PITRM1-202ENST00000380989 ITGA6P23229 1130 aa13.79□□□□□ -0.2
PITRM1-202ENST00000380989 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
PITRM1-202ENST00000380989 RAB11FIP3O75154 756 aa13.79□□□□□ -0.2
PITRM1-202ENST00000380989 CTSWP56202 376 aa13.79□□□□□ -0.2
PITRM1-202ENST00000380989 EZH2Q15910 746 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms