RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 AP5Z1O43299 807 aa15.23■□□□□ 0.03
USP11-204ENST00000377107 UVSSAQ2YD98 709 aa15.23■□□□□ 0.03
USP11-204ENST00000377107 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
USP11-204ENST00000377107 HMG20BQ9P0W2 317 aa15.23■□□□□ 0.03
USP11-204ENST00000377107 XRN1Q8IZH2 1706 aaKnown RBP15.23■□□□□ 0.03
USP11-204ENST00000377107 ZNF165P49910 485 aa15.23■□□□□ 0.03
USP11-204ENST00000377107 CCDC186Q7Z3E2 898 aa15.23■□□□□ 0.03
USP11-204ENST00000377107 TOMM22Q9NS69 142 aa15.23■□□□□ 0.03
USP11-204ENST00000377107 FAM208AQ9UK61 1670 aaKnown RBP15.23■□□□□ 0.03
USP11-204ENST00000377107 SCRN1Q12765 414 aa15.23■□□□□ 0.03
USP11-204ENST00000377107 CHAF1AQ13111 956 aaPredicted RBP15.23■□□□□ 0.03
USP11-204ENST00000377107 PLBD2Q8NHP8 589 aa15.23■□□□□ 0.03
USP11-204ENST00000377107 NBPF26B4DH59 902 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 CPLX1O14810 134 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 NBPF14Q5TI25 921 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 NBPF10Q6P3W6 841 aaKnown RBP15.22■□□□□ 0.03
USP11-204ENST00000377107 SYNE4Q8N205 404 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 NBPF15Q8N660 670 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 TMEM87AQ8NBN3 555 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 ZCRB1Q8TBF4 217 aaKnown RBP15.22■□□□□ 0.03
USP11-204ENST00000377107 SDF4Q9BRK5 362 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 PYCARDQ9ULZ3 195 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 PTPDC1A2A3K4 754 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 MCM5P33992 734 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 LRMPQ12912 555 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 ISM2Q6H9L7 571 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 CCDC144CPQ8IYA2 1237 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 UBE2Q2Q8WVN8 375 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 NRBP1Q9UHY1 535 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 RXRAP19793 462 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 STOX1Q6ZVD7 989 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 KBTBD3Q8NAB2 608 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 GTF3C6Q969F1 213 aa15.22■□□□□ 0.03
USP11-204ENST00000377107 GNL2Q13823 731 aaKnown RBP15.21■□□□□ 0.03
USP11-204ENST00000377107 FAM200AQ8TCP9 573 aa15.21■□□□□ 0.03
USP11-204ENST00000377107 NPHP4O75161 1426 aaPredicted RBP15.21■□□□□ 0.03
USP11-204ENST00000377107 ADORA1P30542 326 aa15.21■□□□□ 0.03
USP11-204ENST00000377107 CCDC158Q5M9N0 1113 aa15.21■□□□□ 0.03
USP11-204ENST00000377107 CCAR1Q8IX12 1150 aaKnown RBP15.21■□□□□ 0.03
USP11-204ENST00000377107 C16orf45Q96MC5 204 aaPredicted RBP15.21■□□□□ 0.03
USP11-204ENST00000377107 CBX8Q9HC52 389 aa15.21■□□□□ 0.03
USP11-204ENST00000377107 GJB4Q9NTQ9 266 aa15.21■□□□□ 0.03
USP11-204ENST00000377107 HAUS7Q99871 368 aa15.21■□□□□ 0.02
USP11-204ENST00000377107 BIN1O00499 593 aa15.2■□□□□ 0.02
USP11-204ENST00000377107 IDH1O75874 414 aaKnown RBP15.2■□□□□ 0.02
USP11-204ENST00000377107 RGPD2P0DJD1 1756 aa15.2■□□□□ 0.02
USP11-204ENST00000377107 KINO60870 393 aaKnown RBP15.2■□□□□ 0.02
USP11-204ENST00000377107 RFX5P48382 616 aaPredicted RBP15.2■□□□□ 0.02
USP11-204ENST00000377107 DHX32Q7L7V1 743 aaKnown RBP15.2■□□□□ 0.02
USP11-204ENST00000377107 RALYLQ86SE5 291 aaKnown RBP15.2■□□□□ 0.02
USP11-204ENST00000377107 PGBD1Q96JS3 809 aa15.2■□□□□ 0.02
USP11-204ENST00000377107 MRVI1Q9Y6F6 885 aa15.2■□□□□ 0.02
USP11-204ENST00000377107 HELBQ8NG08 1087 aaPredicted RBP15.2■□□□□ 0.02
USP11-204ENST00000377107 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
USP11-204ENST00000377107 TMEM94Q12767 1356 aa15.19■□□□□ 0.02
USP11-204ENST00000377107 CNNM1Q9NRU3 951 aa15.19■□□□□ 0.02
USP11-204ENST00000377107 CFAP45Q9UL16 551 aa15.19■□□□□ 0.02
USP11-204ENST00000377107 LTN1O94822 1766 aa15.19■□□□□ 0.02
USP11-204ENST00000377107 ZNF609O15014 1411 aa15.19■□□□□ 0.02
USP11-204ENST00000377107 KDM6AO15550 1401 aaPredicted RBP15.18■□□□□ 0.02
USP11-204ENST00000377107 E7EWF7 191 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 HSPD1P10809 573 aaKnown RBP15.18■□□□□ 0.02
USP11-204ENST00000377107 METTL24Q5JXM2 366 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 COL15A1P39059 1388 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 FER1L4A9Z1Z3 1794 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 EYA2O00167 538 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 CCDC82Q8N4S0 544 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 FSIP1Q8NA03 581 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 PIBF1Q8WXW3 757 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 PDCL3Q9H2J4 239 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 KIF3AQ9Y496 699 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 STK38Q15208 465 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 USP28Q96RU2 1077 aa15.18■□□□□ 0.02
USP11-204ENST00000377107 IL15P40933 162 aaPredicted RBP15.17■□□□□ 0.02
USP11-204ENST00000377107 DDX19AQ9NUU7 478 aaKnown RBP15.17■□□□□ 0.02
USP11-204ENST00000377107 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
USP11-204ENST00000377107 GOLGA8BA8MQT2 603 aa15.17■□□□□ 0.02
USP11-204ENST00000377107 NFAT5O94916 1531 aa15.17■□□□□ 0.02
USP11-204ENST00000377107 UTYO14607 1347 aa15.17■□□□□ 0.02
USP11-204ENST00000377107 KLF18A0A0U1RQI7 1052 aa15.17■□□□□ 0.02
USP11-204ENST00000377107 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
USP11-204ENST00000377107 LDHAL6AQ6ZMR3 332 aa15.17■□□□□ 0.02
USP11-204ENST00000377107 MEGF6O75095 1541 aa15.17■□□□□ 0.02
USP11-204ENST00000377107 MED23Q9ULK4 1368 aa15.16■□□□□ 0.02
USP11-204ENST00000377107 M0R2C6 588 aa15.16■□□□□ 0.02
USP11-204ENST00000377107 RNF113AO15541 343 aaKnown RBP15.16■□□□□ 0.02
USP11-204ENST00000377107 ATP2B1P20020 1258 aa15.16■□□□□ 0.02
USP11-204ENST00000377107 ZAP70P43403 619 aa15.16■□□□□ 0.02
USP11-204ENST00000377107 RRP12Q5JTH9 1297 aaKnown RBP15.16■□□□□ 0.02
USP11-204ENST00000377107 OSBP2Q969R2 916 aa15.16■□□□□ 0.02
USP11-204ENST00000377107 TMOD3Q9NYL9 352 aa15.16■□□□□ 0.02
USP11-204ENST00000377107 FOXO4P98177 505 aa15.16■□□□□ 0.02
USP11-204ENST00000377107 IFIT5Q13325 482 aaKnown RBP15.16■□□□□ 0.02
USP11-204ENST00000377107 DNAJC10Q8IXB1 793 aa15.16■□□□□ 0.02
USP11-204ENST00000377107 TRMT1Q9NXH9 659 aaKnown RBP15.16■□□□□ 0.02
USP11-204ENST00000377107 NFXL1Q6ZNB6 911 aa15.16■□□□□ 0.02
USP11-204ENST00000377107 ATG9AQ7Z3C6 839 aa15.16■□□□□ 0.02
USP11-204ENST00000377107 XAGE2Q96GT9 111 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms