RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 BAG1Q99933 345 aaPredicted RBP12.9□□□□□ -0.35
SYNPO2L-201ENST00000372873 BICC1Q9H694 974 aaKnown RBP12.9□□□□□ -0.35
SYNPO2L-201ENST00000372873 FAM204AQ9H8W3 233 aa12.9□□□□□ -0.35
SYNPO2L-201ENST00000372873 FRMD3A2A2Y4 597 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 PEX19P40855 299 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 IQCEQ6IPM2 695 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 LARP1Q6PKG0 1096 aaKnown RBP12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 SLC24A3Q9HC58 644 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 MAST1Q9Y2H9 1570 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 PIP4K2BP78356 416 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 AP1ARQ63HQ0 302 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 CC2D1AQ6P1N0 951 aaPredicted RBP12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 BCAS4Q8TDM0 211 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 TRIM35Q9UPQ4 493 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 EIF2AK4Q9P2K8 1649 aaKnown RBP12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 TUBBP07437 444 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 PLA2G4AP47712 749 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 ANKRD18AQ8IVF6 992 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 CTCFLQ8NI51 663 aaPredicted RBP12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 RABGGTAQ92696 567 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 DACH1Q9UI36 760 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 SNX14Q9Y5W7 946 aa12.89□□□□□ -0.35
SYNPO2L-201ENST00000372873 AMPHP49418 695 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 B4GALNT4Q76KP1 1039 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 RSRC1Q96IZ7 334 aaKnown RBP12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 GDAP1L1Q96MZ0 367 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 TUBB4BP68371 445 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 NEDD9Q14511 834 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 TMEM87AQ8NBN3 555 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 GOLGA6CA6NDK9 693 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 GOLGA6DP0CG33 693 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 TEFQ10587 303 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 VPS53Q5VIR6 699 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 GOLGA6AQ9NYA3 693 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 LCMT1Q9UIC8 334 aa12.88□□□□□ -0.35
SYNPO2L-201ENST00000372873 KDM5DQ9BY66 1539 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 A0A087WWV3 80 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 CDC25BP30305 580 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 TXLNAP40222 546 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 KRT32Q14532 448 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 SIRT2Q8IXJ6 389 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 CCDC151A5D8V7 595 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 POLR3DP05423 398 aaPredicted RBP12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 CCT2P78371 535 aaKnown RBP12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 KLHL10Q6JEL2 608 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 N4BP2L2Q92802 583 aaPredicted RBP12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 FHOD1Q9Y613 1164 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 FANCCQ00597 558 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 SATB1Q01826 763 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 ODF2LQ9ULJ1 636 aa12.87□□□□□ -0.35
SYNPO2L-201ENST00000372873 FAM83GA6ND36 823 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 ARHGAP6O43182 974 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 CCDC121Q6ZUS5 278 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 FAM71BQ8TC56 605 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 A0A1B0GVL5 298 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 CEP85LQ5SZL2 805 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 PLA2G4DQ86XP0 818 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 RTEL1-TNFRSF6BF6WH68 1400 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 MATR3P43243 847 aaKnown RBP eCLIP12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 APOBRQ0VD83 1088 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 AACSQ86V21 672 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 CABS1Q96KC9 395 aa12.86□□□□□ -0.35
SYNPO2L-201ENST00000372873 AP5Z1O43299 807 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 FAM160A1Q05DH4 1040 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 RGS12O14924 1447 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 ATP10AO60312 1499 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 PREX2Q70Z35 1606 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 ADCY10Q96PN6 1610 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 NUTM2GQ5VZR2 741 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 RUFY3Q7L099 469 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 RBM8AQ9Y5S9 174 aaKnown RBP12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 RTL1A6NKG5 1358 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 SULT6B1Q6IMI4 303 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 EID1Q9Y6B2 187 aa12.85□□□□□ -0.35
SYNPO2L-201ENST00000372873 OPA1O60313 960 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 TRDNQ13061 729 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 STIM1Q13586 685 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 MCM10Q7L590 875 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 MED4Q9NPJ6 270 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 EMILIN1Q9Y6C2 1016 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 UGGT1Q9NYU2 1555 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 ARHGAP25P42331 645 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 MYO5CQ9NQX4 1742 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 PHLPP2Q6ZVD8 1323 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 HSF2BPO75031 334 aa12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 SAFBQ15424 915 aaKnown RBP eCLIP12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 SPATS2LQ9NUQ6 558 aaKnown RBP12.84□□□□□ -0.35
SYNPO2L-201ENST00000372873 PTPRCP08575 1304 aa12.83□□□□□ -0.35
SYNPO2L-201ENST00000372873 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.35
SYNPO2L-201ENST00000372873 ATP2B2Q01814 1243 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms