RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 RNF113AO15541 343 aaKnown RBP13.41□□□□□ -0.26
SYNE1-204ENST00000367248 KCNQ4P56696 695 aa13.4□□□□□ -0.26
SYNE1-204ENST00000367248 KLHL10Q6JEL2 608 aa13.4□□□□□ -0.26
SYNE1-204ENST00000367248 TMTC2Q8N394 836 aa13.4□□□□□ -0.26
SYNE1-204ENST00000367248 TCEANC2Q96MN5 208 aa13.4□□□□□ -0.26
SYNE1-204ENST00000367248 ANAPC15P60006 121 aa13.4□□□□□ -0.26
SYNE1-204ENST00000367248 EHMT1Q9H9B1 1298 aa13.4□□□□□ -0.26
SYNE1-204ENST00000367248 SAP30BPQ9UHR5 308 aaKnown RBP13.4□□□□□ -0.26
SYNE1-204ENST00000367248 ARHGEF5Q12774 1597 aa13.4□□□□□ -0.26
SYNE1-204ENST00000367248 NMIQ13287 307 aaPredicted RBP13.4□□□□□ -0.26
SYNE1-204ENST00000367248 BICC1Q9H694 974 aaKnown RBP13.4□□□□□ -0.26
SYNE1-204ENST00000367248 STX6O43752 255 aa13.4□□□□□ -0.26
SYNE1-204ENST00000367248 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
SYNE1-204ENST00000367248 CAMK4Q16566 473 aa13.4□□□□□ -0.27
SYNE1-204ENST00000367248 PANK2Q9BZ23 570 aa13.4□□□□□ -0.27
SYNE1-204ENST00000367248 RAB3GAP1Q15042 981 aa13.39□□□□□ -0.27
SYNE1-204ENST00000367248 SLC26A6Q9BXS9 759 aa13.39□□□□□ -0.27
SYNE1-204ENST00000367248 GRPEL1Q9HAV7 217 aa13.39□□□□□ -0.27
SYNE1-204ENST00000367248 ZBTB7BO15156 539 aaPredicted RBP13.39□□□□□ -0.27
SYNE1-204ENST00000367248 PPP4R3BQ5MIZ7 849 aa13.39□□□□□ -0.27
SYNE1-204ENST00000367248 CCDC97Q96F63 343 aaPredicted RBP13.39□□□□□ -0.27
SYNE1-204ENST00000367248 LRRC2Q9BYS8 371 aa13.39□□□□□ -0.27
SYNE1-204ENST00000367248 ZBTB43O43298 467 aa13.39□□□□□ -0.27
SYNE1-204ENST00000367248 MAP3K9P80192 1104 aa13.39□□□□□ -0.27
SYNE1-204ENST00000367248 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
SYNE1-204ENST00000367248 PLCG2P16885 1265 aa13.39□□□□□ -0.27
SYNE1-204ENST00000367248 FILIP1Q7Z7B0 1213 aa13.39□□□□□ -0.27
SYNE1-204ENST00000367248 TRIM21P19474 475 aaKnown RBP13.38□□□□□ -0.27
SYNE1-204ENST00000367248 EIF4A1P60842 406 aaKnown RBP13.38□□□□□ -0.27
SYNE1-204ENST00000367248 MCM9Q9NXL9 1143 aa13.38□□□□□ -0.27
SYNE1-204ENST00000367248 USP19O94966 1318 aa13.38□□□□□ -0.27
SYNE1-204ENST00000367248 SYCE3A1L190 88 aa13.38□□□□□ -0.27
SYNE1-204ENST00000367248 CCDC181Q5TID7 509 aa13.38□□□□□ -0.27
SYNE1-204ENST00000367248 DPP8Q6V1X1 898 aaPredicted RBP13.38□□□□□ -0.27
SYNE1-204ENST00000367248 FAM177A1Q8N128 213 aaPredicted RBP13.38□□□□□ -0.27
SYNE1-204ENST00000367248 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
SYNE1-204ENST00000367248 PPP1R12BO60237 982 aaPredicted RBP13.38□□□□□ -0.27
SYNE1-204ENST00000367248 GNAT2P19087 354 aa13.38□□□□□ -0.27
SYNE1-204ENST00000367248 MPHOSPH6Q99547 160 aaKnown RBP13.38□□□□□ -0.27
SYNE1-204ENST00000367248 RDXP35241 583 aaKnown RBP13.38□□□□□ -0.27
SYNE1-204ENST00000367248 EIF5P55010 431 aaKnown RBP13.38□□□□□ -0.27
SYNE1-204ENST00000367248 TMX3Q96JJ7 454 aa13.38□□□□□ -0.27
SYNE1-204ENST00000367248 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
SYNE1-204ENST00000367248 MAGEB6P1A0A0J9YX57 407 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 RUFY1Q96T51 708 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 ANO10Q9NW15 660 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 ITGA6P23229 1130 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 TRAF1Q13077 416 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 TXLNBQ8N3L3 684 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 RAD50Q92878 1312 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 BAG4O95429 457 aaKnown RBP13.37□□□□□ -0.27
SYNE1-204ENST00000367248 GNAQP50148 359 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 TNPO1Q92973 898 aaKnown RBP13.37□□□□□ -0.27
SYNE1-204ENST00000367248 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
SYNE1-204ENST00000367248 KIF20AO95235 890 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 IDEP14735 1019 aa13.37□□□□□ -0.27
SYNE1-204ENST00000367248 PDE8AO60658 829 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 CFAP100Q494V2 611 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 FSIP1Q8NA03 581 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 TCP11L1Q9NUJ3 509 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 ZBTB21Q9ULJ3 1066 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 NBPF7P0C2Y1 421 aaPredicted RBP13.36□□□□□ -0.27
SYNE1-204ENST00000367248 CDR1P51861 262 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 MAGEB6Q8N7X4 407 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 DDX19AQ9NUU7 478 aaKnown RBP13.36□□□□□ -0.27
SYNE1-204ENST00000367248 CFAP65Q6ZU64 1925 aaKnown RBP13.36□□□□□ -0.27
SYNE1-204ENST00000367248 ZNF335Q9H4Z2 1342 aaPredicted RBP13.36□□□□□ -0.27
SYNE1-204ENST00000367248 TCP10Q12799 353 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 PHKG2P15735 406 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 NECAB1Q8N987 351 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 MMRN2Q9H8L6 949 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 INSRP06213 1382 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 HEATR3Q7Z4Q2 680 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 PLEKHM2Q8IWE5 1019 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 BICD1Q96G01 975 aa13.36□□□□□ -0.27
SYNE1-204ENST00000367248 TRPC5Q9UL62 973 aaPredicted RBP13.36□□□□□ -0.27
SYNE1-204ENST00000367248 EFCAB6Q5THR3 1501 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 GCKRQ14397 625 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 CCDC183Q5T5S1 534 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 IFIT1BQ5T764 474 aaKnown RBP13.35□□□□□ -0.27
SYNE1-204ENST00000367248 PKD2L1Q9P0L9 805 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 PRC1O43663 620 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 TAF5LO75529 589 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 UBA7P41226 1012 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 CNNM3Q8NE01 707 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 TNNI2P48788 182 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 CCDC148Q8NFR7 591 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 DENND2AQ9ULE3 1009 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 TIMM10P62072 90 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 RTN1Q16799 776 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 IL17REQ8NFR9 667 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 CTAGE5O15320 804 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 HSP90B2PQ58FF3 399 aa13.35□□□□□ -0.27
SYNE1-204ENST00000367248 SPATA31E1Q6ZUB1 1445 aa13.34□□□□□ -0.27
SYNE1-204ENST00000367248 A0A1B0GUL7 405 aa13.34□□□□□ -0.27
SYNE1-204ENST00000367248 DBNDD2Q9BQY9 259 aa13.34□□□□□ -0.27
SYNE1-204ENST00000367248 PICK1Q9NRD5 415 aa13.34□□□□□ -0.27
SYNE1-204ENST00000367248 KIAA0232Q92628 1395 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms