RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
CLIP1-203ENST00000361654 RTN1Q16799 776 aa12.51□□□□□ -0.41
CLIP1-203ENST00000361654 H0YIN7 160 aa12.51□□□□□ -0.41
CLIP1-203ENST00000361654 CALML3P27482 149 aa12.51□□□□□ -0.41
CLIP1-203ENST00000361654 PRPF4BQ13523 1007 aaKnown RBP12.51□□□□□ -0.41
CLIP1-203ENST00000361654 GPR162Q16538 588 aa12.51□□□□□ -0.41
CLIP1-203ENST00000361654 SPECC1Q5M775 1068 aa12.51□□□□□ -0.41
CLIP1-203ENST00000361654 DDX19AQ9NUU7 478 aaKnown RBP12.51□□□□□ -0.41
CLIP1-203ENST00000361654 HSPA2P54652 639 aa12.51□□□□□ -0.41
CLIP1-203ENST00000361654 PCDH11XQ9BZA7 1347 aa12.51□□□□□ -0.41
CLIP1-203ENST00000361654 PCDH11YQ9BZA8 1340 aa12.51□□□□□ -0.41
CLIP1-203ENST00000361654 ANKRD36BQ8N2N9 1353 aa12.51□□□□□ -0.41
CLIP1-203ENST00000361654 GTPBP4Q9BZE4 634 aaKnown RBP12.51□□□□□ -0.41
CLIP1-203ENST00000361654 PRPHP41219 470 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 RARSP54136 660 aaKnown RBP12.5□□□□□ -0.41
CLIP1-203ENST00000361654 DCAF5Q96JK2 942 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 TRIM47Q96LD4 638 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 LMBR1LQ6UX01 489 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 OTUD6BQ8N6M0 293 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-203ENST00000361654 CEP83Q9Y592 693 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.5□□□□□ -0.411e-6■■■■□ 20.3
CLIP1-203ENST00000361654 ARL1P40616 181 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-203ENST00000361654 KIF22Q14807 665 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 ARHGEF6Q15052 776 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 RAB3IL1Q8TBN0 382 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 IRS4O14654 1257 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-203ENST00000361654 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-203ENST00000361654 DNA2P51530 1060 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 CCDC183Q5T5S1 534 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 HS2ST1Q7LGA3 356 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 MCM9Q9NXL9 1143 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 RTL9Q8NET4 1388 aa12.5□□□□□ -0.41
CLIP1-203ENST00000361654 UBE4AQ14139 1066 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 KSR2Q6VAB6 950 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 PPP1R14CQ8TAE6 165 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 MMRN2Q9H8L6 949 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 NDC80O14777 642 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 PARP10Q53GL7 1025 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 SLC9C2Q5TAH2 1124 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 KRT79Q5XKE5 535 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 CDK13Q14004 1512 aaKnown RBP12.49□□□□□ -0.41
CLIP1-203ENST00000361654 FAM13AO94988 1023 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 CASQ1P31415 396 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 SLC8A3P57103 927 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 GNA11P29992 359 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 STAT6P42226 847 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 ARHGEF10LQ9HCE6 1279 aa12.49□□□□□ -0.41
CLIP1-203ENST00000361654 KLF18A0A0U1RQI7 1052 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 KIAA0753Q2KHM9 967 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 KIAA1524Q8TCG1 905 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 ABCC5O15440 1437 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 GRM8O00222 908 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 CPLX3Q8WVH0 158 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 BTG4Q9NY30 223 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 IL16Q14005 1332 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 MCM4P33991 863 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 GRIN2AQ12879 1464 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 FAM212AQ96EL1 285 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLIP1-203ENST00000361654 SLC5A4Q9NY91 659 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 LAMC3Q9Y6N6 1575 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 DKC1O60832 514 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLIP1-203ENST00000361654 SLC39A6Q13433 755 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 EHBP1Q8NDI1 1231 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 SPC25Q9HBM1 224 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 CHPF2Q9P2E5 772 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 PLCH2O75038 1416 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 HLTFQ14527 1009 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLIP1-203ENST00000361654 CERS3Q8IU89 383 aa12.48□□□□□ -0.41
CLIP1-203ENST00000361654 SCAF11Q99590 1463 aaKnown RBP12.47□□□□□ -0.41
CLIP1-203ENST00000361654 JARID2Q92833 1246 aaPredicted RBP12.47□□□□□ -0.41
CLIP1-203ENST00000361654 DENND2AQ9ULE3 1009 aa12.47□□□□□ -0.41
CLIP1-203ENST00000361654 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
CLIP1-203ENST00000361654 AKR1B10O60218 316 aa12.47□□□□□ -0.41
CLIP1-203ENST00000361654 SPAG1Q07617 926 aa12.47□□□□□ -0.41
CLIP1-203ENST00000361654 BIRC2Q13490 618 aa12.47□□□□□ -0.41
CLIP1-203ENST00000361654 ZSCAN16Q9H4T2 348 aaPredicted RBP12.47□□□□□ -0.41
CLIP1-203ENST00000361654 SHTN1A0MZ66 631 aa12.47□□□□□ -0.41
CLIP1-203ENST00000361654 PTPN14Q15678 1187 aa12.47□□□□□ -0.41
CLIP1-203ENST00000361654 CABLES1Q8TDN4 633 aa12.47□□□□□ -0.41
CLIP1-203ENST00000361654 CEP63Q96MT8 703 aa12.47□□□□□ -0.41
CLIP1-203ENST00000361654 BMS1Q14692 1282 aaKnown RBP12.47□□□□□ -0.41
CLIP1-203ENST00000361654 RHPN1Q8TCX5 695 aa12.47□□□□□ -0.41
CLIP1-203ENST00000361654 NCKAP5LQ9HCH0 1330 aa12.46□□□□□ -0.41
CLIP1-203ENST00000361654 GOLGA6L9A6NEM1 432 aa12.46□□□□□ -0.41
CLIP1-203ENST00000361654 NEMFO60524 1076 aa12.46□□□□□ -0.41
CLIP1-203ENST00000361654 UFL1O94874 794 aa12.46□□□□□ -0.41
CLIP1-203ENST00000361654 FLAD1Q8NFF5 587 aa12.46□□□□□ -0.41
CLIP1-203ENST00000361654 PANK2Q9BZ23 570 aa12.46□□□□□ -0.41
CLIP1-203ENST00000361654 NIM1KQ8IY84 436 aa12.46□□□□□ -0.41
CLIP1-203ENST00000361654 MBIPQ9NS73 344 aa12.46□□□□□ -0.41
CLIP1-203ENST00000361654 H7C1D1 291 aa12.46□□□□□ -0.42
CLIP1-203ENST00000361654 M0QZ92 97 aa12.46□□□□□ -0.42
CLIP1-203ENST00000361654 ANXA1P04083 346 aa12.46□□□□□ -0.42
CLIP1-203ENST00000361654 GSDMDP57764 484 aa12.46□□□□□ -0.42
CLIP1-203ENST00000361654 STX1AQ16623 288 aa12.46□□□□□ -0.42
CLIP1-203ENST00000361654 GGA1Q9UJY5 639 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms