RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 TDRD7Q8NHU6 1098 aaKnown RBP28.37■■■□□ 2.13
DDX42-201ENST00000359353 TNNI3KQ59H18 835 aa28.37■■■□□ 2.13
DDX42-201ENST00000359353 HMG20BQ9P0W2 317 aa28.37■■■□□ 2.13
DDX42-201ENST00000359353 FPGT-TNNI3KV9GXZ4 949 aa28.37■■■□□ 2.13
DDX42-201ENST00000359353 UTYO14607 1347 aa28.36■■■□□ 2.13
DDX42-201ENST00000359353 USP27XA6NNY8 438 aa28.36■■■□□ 2.13
DDX42-201ENST00000359353 APOBRQ0VD83 1088 aa28.36■■■□□ 2.13
DDX42-201ENST00000359353 RBM43Q6ZSC3 357 aaKnown RBP28.36■■■□□ 2.13
DDX42-201ENST00000359353 KCNH5Q8NCM2 988 aa28.36■■■□□ 2.13
DDX42-201ENST00000359353 GOLPH3LQ9H4A5 285 aa28.36■■■□□ 2.13
DDX42-201ENST00000359353 HEG1Q9ULI3 1381 aa28.36■■■□□ 2.13
DDX42-201ENST00000359353 TPD52L1Q16890 204 aaPredicted RBP28.35■■■□□ 2.13
DDX42-201ENST00000359353 NFATC2IPQ8NCF5 419 aa28.35■■■□□ 2.13
DDX42-201ENST00000359353 NCBP1Q09161 790 aaKnown RBP28.35■■■□□ 2.13
DDX42-201ENST00000359353 PTPN12Q05209 780 aaKnown RBP28.34■■■□□ 2.13
DDX42-201ENST00000359353 ZC3H6P61129 1189 aaKnown RBP28.33■■■□□ 2.13
DDX42-201ENST00000359353 ZNF790Q6PG37 636 aa28.33■■■□□ 2.13
DDX42-201ENST00000359353 FILIP1Q7Z7B0 1213 aa28.33■■■□□ 2.13
DDX42-201ENST00000359353 ANKRD7Q92527 254 aa28.33■■■□□ 2.13
DDX42-201ENST00000359353 ARHGEF25Q86VW2 580 aa28.33■■■□□ 2.13
DDX42-201ENST00000359353 CCAR1Q8IX12 1150 aaKnown RBP28.33■■■□□ 2.13
DDX42-201ENST00000359353 CTIFO43310 598 aaKnown RBP28.33■■■□□ 2.13
DDX42-201ENST00000359353 USPL1Q5W0Q7 1092 aa28.32■■■□□ 2.12
DDX42-201ENST00000359353 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.32■■■□□ 2.12
DDX42-201ENST00000359353 TAOK2Q9UL54 1235 aa28.32■■■□□ 2.12
DDX42-201ENST00000359353 V9GYY5 206 aaPredicted RBP28.32■■■□□ 2.12
DDX42-201ENST00000359353 GOLGA6L19H0YKK7 550 aa28.32■■■□□ 2.12
DDX42-201ENST00000359353 ZNF496Q96IT1 587 aaPredicted RBP28.32■■■□□ 2.12
DDX42-201ENST00000359353 USP28Q96RU2 1077 aa28.32■■■□□ 2.12
DDX42-201ENST00000359353 ATP5JP18859 108 aa28.31■■■□□ 2.12
DDX42-201ENST00000359353 DMTNQ08495 405 aa28.31■■■□□ 2.12
DDX42-201ENST00000359353 TSGA10IPQ3SY00 556 aa28.31■■■□□ 2.12
DDX42-201ENST00000359353 CTDNEP1O95476 244 aa28.31■■■□□ 2.12
DDX42-201ENST00000359353 NEUROD6Q96NK8 337 aa28.31■■■□□ 2.12
DDX42-201ENST00000359353 TRMT1Q9NXH9 659 aaKnown RBP28.31■■■□□ 2.12
DDX42-201ENST00000359353 ADD1P35611 737 aaKnown RBP28.3■■■□□ 2.12
DDX42-201ENST00000359353 IQCB1Q15051 598 aa28.3■■■□□ 2.12
DDX42-201ENST00000359353 ALDH8A1Q9H2A2 487 aaPredicted RBP28.3■■■□□ 2.12
DDX42-201ENST00000359353 JCADQ9P266 1359 aa28.3■■■□□ 2.12
DDX42-201ENST00000359353 RFX5P48382 616 aaPredicted RBP28.3■■■□□ 2.12
DDX42-201ENST00000359353 KRT32Q14532 448 aa28.3■■■□□ 2.12
DDX42-201ENST00000359353 USP54Q70EL1 1684 aa28.29■■■□□ 2.12
DDX42-201ENST00000359353 PTPDC1A2A3K4 754 aa28.29■■■□□ 2.12
DDX42-201ENST00000359353 METTL22Q9BUU2 404 aaPredicted RBP28.29■■■□□ 2.12
DDX42-201ENST00000359353 GOLIM4O00461 696 aa28.29■■■□□ 2.12
DDX42-201ENST00000359353 MCMDC2Q4G0Z9 681 aa28.29■■■□□ 2.12
DDX42-201ENST00000359353 ANKRD13DQ6ZTN6 518 aa28.29■■■□□ 2.12
DDX42-201ENST00000359353 NSUN7Q8NE18 718 aaKnown RBP28.29■■■□□ 2.12
DDX42-201ENST00000359353 OTUD7BQ6GQQ9 843 aa28.28■■■□□ 2.12
DDX42-201ENST00000359353 CFAP45Q9UL16 551 aa28.28■■■□□ 2.12
DDX42-201ENST00000359353 COPRSQ9NQ92 184 aa28.27■■■□□ 2.12
DDX42-201ENST00000359353 GPHNQ9NQX3 736 aaPredicted RBP28.27■■■□□ 2.12
DDX42-201ENST00000359353 U3KPZ7 1027 aaPredicted RBP28.27■■■□□ 2.12
DDX42-201ENST00000359353 A0A087WZG4 1122 aa28.27■■■□□ 2.12
DDX42-201ENST00000359353 TIMM10P62072 90 aa28.27■■■□□ 2.12
DDX42-201ENST00000359353 RAB11FIP4Q86YS3 637 aa28.27■■■□□ 2.12
DDX42-201ENST00000359353 ADGRL3Q9HAR2 1447 aa28.26■■■□□ 2.11
DDX42-201ENST00000359353 BECN2A8MW95 431 aa28.26■■■□□ 2.11
DDX42-201ENST00000359353 PDIA4P13667 645 aaKnown RBP28.26■■■□□ 2.11
DDX42-201ENST00000359353 ME1P48163 572 aa28.26■■■□□ 2.11
DDX42-201ENST00000359353 LRRC8AQ8IWT6 810 aa28.26■■■□□ 2.11
DDX42-201ENST00000359353 CCDC112Q8NEF3 446 aa28.26■■■□□ 2.11
DDX42-201ENST00000359353 SYTL4Q96C24 671 aaPredicted RBP28.26■■■□□ 2.11
DDX42-201ENST00000359353 NLRP2Q9NX02 1062 aa28.26■■■□□ 2.11
DDX42-201ENST00000359353 SMTNL1A8MU46 457 aa28.25■■■□□ 2.11
DDX42-201ENST00000359353 C5P01031 1676 aa28.24■■■□□ 2.11
DDX42-201ENST00000359353 SNW1Q13573 536 aaKnown RBP28.24■■■□□ 2.11
DDX42-201ENST00000359353 LMBR1LQ6UX01 489 aa28.24■■■□□ 2.11
DDX42-201ENST00000359353 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.24■■■□□ 2.11
DDX42-201ENST00000359353 ZSCAN16Q9H4T2 348 aaPredicted RBP28.24■■■□□ 2.11
DDX42-201ENST00000359353 TTLL5Q6EMB2 1281 aa28.24■■■□□ 2.11
DDX42-201ENST00000359353 FSIP1Q8NA03 581 aa28.24■■■□□ 2.11
DDX42-201ENST00000359353 AOPEPQ8N6M6 819 aa28.23■■■□□ 2.11
DDX42-201ENST00000359353 SMARCC2Q8TAQ2 1214 aa28.23■■■□□ 2.11
DDX42-201ENST00000359353 CEP135Q66GS9 1140 aa28.23■■■□□ 2.11
DDX42-201ENST00000359353 CCDC73Q6ZRK6 1079 aa28.23■■■□□ 2.11
DDX42-201ENST00000359353 KLHL34Q8N239 644 aa28.23■■■□□ 2.11
DDX42-201ENST00000359353 HAUS7Q99871 368 aa28.23■■■□□ 2.11
DDX42-201ENST00000359353 SLC52A2Q9HAB3 445 aa28.23■■■□□ 2.11
DDX42-201ENST00000359353 NCAPD2Q15021 1401 aa28.23■■■□□ 2.11
DDX42-201ENST00000359353 LAMA4Q16363 1823 aa28.22■■■□□ 2.11
DDX42-201ENST00000359353 PFKFB2O60825 505 aa28.22■■■□□ 2.11
DDX42-201ENST00000359353 SKILP12757 684 aa28.22■■■□□ 2.11
DDX42-201ENST00000359353 STX1AQ16623 288 aa28.22■■■□□ 2.11
DDX42-201ENST00000359353 KINO60870 393 aaKnown RBP28.22■■■□□ 2.11
DDX42-201ENST00000359353 ILDR1Q86SU0 546 aaPredicted RBP28.22■■■□□ 2.11
DDX42-201ENST00000359353 A0A1B0GVL5 298 aa28.22■■■□□ 2.11
DDX42-201ENST00000359353 DHX32Q7L7V1 743 aaKnown RBP28.22■■■□□ 2.11
DDX42-201ENST00000359353 DHX40Q8IX18 779 aaKnown RBP28.22■■■□□ 2.11
DDX42-201ENST00000359353 GJB4Q9NTQ9 266 aa28.22■■■□□ 2.11
DDX42-201ENST00000359353 RGPD5Q99666 1765 aa28.21■■■□□ 2.11
DDX42-201ENST00000359353 CCDC69A6NI79 296 aa28.21■■■□□ 2.11
DDX42-201ENST00000359353 NPHP1O15259 732 aa28.21■■■□□ 2.11
DDX42-201ENST00000359353 RCOR1Q9UKL0 485 aa28.21■■■□□ 2.11
DDX42-201ENST00000359353 RAPGEF4Q8WZA2 1011 aa28.2■■■□□ 2.11
DDX42-201ENST00000359353 KBTBD3Q8NAB2 608 aa28.2■■■□□ 2.1
DDX42-201ENST00000359353 ZNF594Q96JF6 807 aaPredicted RBP28.2■■■□□ 2.1
DDX42-201ENST00000359353 HAND2P61296 217 aa28.19■■■□□ 2.1
DDX42-201ENST00000359353 KDM6AO15550 1401 aaPredicted RBP28.19■■■□□ 2.1
DDX42-201ENST00000359353 FER1L4A9Z1Z3 1794 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms