RNA–Protein interactions for RNA: ENST00000358064.3

HIST4H4-201, Transcript of histone cluster 4 H4, humanhuman

TSL 1 (best)

Gene HIST4H4, Length 1,918 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-201ENST00000358064 LRP5O75197 1615 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 COL15A1P39059 1388 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 IPO8O15397 1037 aaKnown RBP13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 ZPR1O75312 459 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 EIF5P55010 431 aaKnown RBP13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 PDLIM2Q96JY6 352 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 CRISPLD2Q9H0B8 497 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 HYPKQ9NX55 129 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 UTRNP46939 3433 aa13.02□□□□□ -0.32
HIST4H4-201ENST00000358064 NBPF26B4DH59 902 aa13.02□□□□□ -0.32
HIST4H4-201ENST00000358064 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.32
HIST4H4-201ENST00000358064 NBPF10Q6P3W6 841 aaKnown RBP13.02□□□□□ -0.32
HIST4H4-201ENST00000358064 NBPF15Q8N660 670 aa13.02□□□□□ -0.32
HIST4H4-201ENST00000358064 PRDM10Q9NQV6 1147 aa13.02□□□□□ -0.32
HIST4H4-201ENST00000358064 GYS1P13807 737 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 TRIM27P14373 513 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 FKBP5Q13451 457 aaPredicted RBP13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 SPATA32Q96LK8 384 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 TNNQ9UQP3 1299 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 PTPRCP08575 1304 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 ZNF445P59923 1031 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 AIMP1Q12904 312 aaKnown RBP13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 PDAP1Q13442 181 aaKnown RBP13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 C20orf194Q5TEA3 1177 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 HSCBQ8IWL3 235 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 NLGN1Q8N2Q7 840 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 ARHGAP45Q92619 1136 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 YY1AP1Q9H869 796 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 TBC1D2BQ9UPU7 963 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
HIST4H4-201ENST00000358064 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
HIST4H4-201ENST00000358064 AXDND1Q5T1B0 1012 aaPredicted RBP13□□□□□ -0.33
HIST4H4-201ENST00000358064 CLEC17AQ6ZS10 378 aa13□□□□□ -0.33
HIST4H4-201ENST00000358064 LRP10Q7Z4F1 713 aa13□□□□□ -0.33
HIST4H4-201ENST00000358064 PBXIP1Q96AQ6 731 aa13□□□□□ -0.33
HIST4H4-201ENST00000358064 API5Q9BZZ5 524 aaKnown RBP13□□□□□ -0.33
HIST4H4-201ENST00000358064 NARFQ9UHQ1 456 aa13□□□□□ -0.33
HIST4H4-201ENST00000358064 C4AP0C0L4 1744 aa13□□□□□ -0.33
HIST4H4-201ENST00000358064 A0A087WZG4 1122 aa13□□□□□ -0.33
HIST4H4-201ENST00000358064 MMP10P09238 476 aa13□□□□□ -0.33
HIST4H4-201ENST00000358064 COPS6Q7L5N1 327 aa13□□□□□ -0.33
HIST4H4-201ENST00000358064 PANK1Q8TE04 598 aa13□□□□□ -0.33
HIST4H4-201ENST00000358064 XAGE3Q8WTP9 111 aa13□□□□□ -0.33
HIST4H4-201ENST00000358064 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
HIST4H4-201ENST00000358064 DZIP1LQ8IYY4 767 aaKnown RBP12.99□□□□□ -0.33
HIST4H4-201ENST00000358064 PDCL2Q8N4E4 241 aa12.99□□□□□ -0.33
HIST4H4-201ENST00000358064 F6X3S4 739 aa12.98□□□□□ -0.33
HIST4H4-201ENST00000358064 CLGNO14967 610 aa12.98□□□□□ -0.33
HIST4H4-201ENST00000358064 PDE3AQ14432 1141 aa12.98□□□□□ -0.33
HIST4H4-201ENST00000358064 SNX21Q969T3 373 aa12.98□□□□□ -0.33
HIST4H4-201ENST00000358064 DDX58O95786 925 aaKnown RBP12.98□□□□□ -0.33
HIST4H4-201ENST00000358064 RLBP1P12271 317 aa12.98□□□□□ -0.33
HIST4H4-201ENST00000358064 KLHL40Q2TBA0 621 aa12.98□□□□□ -0.33
HIST4H4-201ENST00000358064 MRRFQ96E11 262 aaKnown RBP12.98□□□□□ -0.33
HIST4H4-201ENST00000358064 FHDC1Q9C0D6 1143 aaPredicted RBP12.98□□□□□ -0.33
HIST4H4-201ENST00000358064 KIF3AQ9Y496 699 aa12.98□□□□□ -0.33
HIST4H4-201ENST00000358064 PI4KAP2A4QPH2 592 aa12.97□□□□□ -0.33
HIST4H4-201ENST00000358064 DDIT3P35638 169 aa12.97□□□□□ -0.33
HIST4H4-201ENST00000358064 SLC4A10Q6U841 1118 aa12.97□□□□□ -0.33
HIST4H4-201ENST00000358064 TTLL7Q6ZT98 887 aa12.97□□□□□ -0.33
HIST4H4-201ENST00000358064 GAS2L3Q86XJ1 694 aa12.97□□□□□ -0.33
HIST4H4-201ENST00000358064 SMC5Q8IY18 1101 aa12.97□□□□□ -0.33
HIST4H4-201ENST00000358064 PI4KAP1Q8N8J0 262 aa12.97□□□□□ -0.33
HIST4H4-201ENST00000358064 ABCC4O15439 1325 aa12.96□□□□□ -0.33
HIST4H4-201ENST00000358064 MMP14P50281 582 aa12.96□□□□□ -0.33
HIST4H4-201ENST00000358064 BICDL1Q6ZP65 573 aa12.96□□□□□ -0.33
HIST4H4-201ENST00000358064 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
HIST4H4-201ENST00000358064 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
HIST4H4-201ENST00000358064 PROCA1Q8NCQ7 364 aaPredicted RBP12.96□□□□□ -0.33
HIST4H4-201ENST00000358064 GLMNQ92990 594 aa12.96□□□□□ -0.33
HIST4H4-201ENST00000358064 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.33
HIST4H4-201ENST00000358064 SNRKQ9NRH2 765 aa12.96□□□□□ -0.33
HIST4H4-201ENST00000358064 ADCY9O60503 1353 aa12.96□□□□□ -0.33
HIST4H4-201ENST00000358064 TBC1D12O60347 775 aa12.96□□□□□ -0.34
HIST4H4-201ENST00000358064 CAMTA2O94983 1202 aa12.96□□□□□ -0.34
HIST4H4-201ENST00000358064 SKIV2LQ15477 1246 aaKnown RBP12.96□□□□□ -0.34
HIST4H4-201ENST00000358064 KSR2Q6VAB6 950 aa12.96□□□□□ -0.34
HIST4H4-201ENST00000358064 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.34
HIST4H4-201ENST00000358064 TMEM57Q8N5G2 664 aa12.96□□□□□ -0.34
HIST4H4-201ENST00000358064 REPIN1Q9BWE0 567 aaKnown RBP12.96□□□□□ -0.34
HIST4H4-201ENST00000358064 MAP3K2Q9Y2U5 619 aa12.96□□□□□ -0.34
HIST4H4-201ENST00000358064 PARP3Q9Y6F1 533 aa12.96□□□□□ -0.34
HIST4H4-201ENST00000358064 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.95□□□□□ -0.34
HIST4H4-201ENST00000358064 KIAA2012Q0VF49 1180 aa12.95□□□□□ -0.34
HIST4H4-201ENST00000358064 RAB3GAP1Q15042 981 aa12.95□□□□□ -0.34
HIST4H4-201ENST00000358064 COL24A1Q17RW2 1714 aa12.95□□□□□ -0.34
HIST4H4-201ENST00000358064 KIF6Q6ZMV9 814 aa12.95□□□□□ -0.34
HIST4H4-201ENST00000358064 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
HIST4H4-201ENST00000358064 DNAAF4Q8WXU2 420 aa12.95□□□□□ -0.34
HIST4H4-201ENST00000358064 SYT17Q9BSW7 474 aa12.95□□□□□ -0.34
HIST4H4-201ENST00000358064 ZBTB3Q9H5J0 574 aa12.95□□□□□ -0.34
HIST4H4-201ENST00000358064 CALCOCO1Q9P1Z2 691 aa12.95□□□□□ -0.34
HIST4H4-201ENST00000358064 NFIXQ14938 502 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms