RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 EVA1CP58658 441 aa16.33■□□□□ 0.2
EBF3-201ENST00000355311 SPATA32Q96LK8 384 aa16.33■□□□□ 0.2
EBF3-201ENST00000355311 RGPD5Q99666 1765 aa16.32■□□□□ 0.2
EBF3-201ENST00000355311 VGLL3A8MV65 326 aa16.32■□□□□ 0.2
EBF3-201ENST00000355311 NPHP4O75161 1426 aaPredicted RBP16.32■□□□□ 0.2
EBF3-201ENST00000355311 NR1I2O75469 434 aa16.32■□□□□ 0.2
EBF3-201ENST00000355311 DRC7Q8IY82 874 aa16.32■□□□□ 0.2
EBF3-201ENST00000355311 FAM184AQ8NB25 1140 aa16.32■□□□□ 0.2
EBF3-201ENST00000355311 U2AF2P26368 475 aaKnown RBP eCLIP16.32■□□□□ 0.2
EBF3-201ENST00000355311 RNF20Q5VTR2 975 aa16.32■□□□□ 0.2
EBF3-201ENST00000355311 MYRIPQ8NFW9 859 aa16.31■□□□□ 0.2
EBF3-201ENST00000355311 INCENPQ9NQS7 918 aa16.31■□□□□ 0.2
EBF3-201ENST00000355311 NRBP1Q9UHY1 535 aa16.31■□□□□ 0.2
EBF3-201ENST00000355311 ASAP1Q9ULH1 1129 aa16.31■□□□□ 0.2
EBF3-201ENST00000355311 PSMA5P28066 241 aa16.31■□□□□ 0.2
EBF3-201ENST00000355311 SCARF1Q14162 830 aa16.31■□□□□ 0.2
EBF3-201ENST00000355311 ISM2Q6H9L7 571 aa16.31■□□□□ 0.2
EBF3-201ENST00000355311 CCDC144CPQ8IYA2 1237 aa16.31■□□□□ 0.2
EBF3-201ENST00000355311 DCAF5Q96JK2 942 aa16.31■□□□□ 0.2
EBF3-201ENST00000355311 SCRN1Q12765 414 aa16.3■□□□□ 0.2
EBF3-201ENST00000355311 TAF7LQ5H9L4 462 aa16.3■□□□□ 0.2
EBF3-201ENST00000355311 LRP10Q7Z4F1 713 aa16.3■□□□□ 0.2
EBF3-201ENST00000355311 POLR3DP05423 398 aaPredicted RBP16.3■□□□□ 0.2
EBF3-201ENST00000355311 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
EBF3-201ENST00000355311 KRT85P78386 507 aa16.3■□□□□ 0.2
EBF3-201ENST00000355311 CHMP4CQ96CF2 233 aa16.3■□□□□ 0.2
EBF3-201ENST00000355311 A0A1B0GUL7 405 aa16.29■□□□□ 0.2
EBF3-201ENST00000355311 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
EBF3-201ENST00000355311 ZNF609O15014 1411 aa16.29■□□□□ 0.2
EBF3-201ENST00000355311 ZCRB1Q8TBF4 217 aaKnown RBP16.29■□□□□ 0.2
EBF3-201ENST00000355311 FOXO4P98177 505 aa16.29■□□□□ 0.2
EBF3-201ENST00000355311 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
EBF3-201ENST00000355311 MTERF4Q7Z6M4 381 aaKnown RBP16.29■□□□□ 0.2
EBF3-201ENST00000355311 DNAJC25Q9H1X3 360 aa16.29■□□□□ 0.2
EBF3-201ENST00000355311 PAG1Q9NWQ8 432 aa16.29■□□□□ 0.2
EBF3-201ENST00000355311 USP54Q70EL1 1684 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 C1orf167Q5SNV9 1468 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 PHF14O94880 888 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 LRMPQ12912 555 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 ANO6Q4KMQ2 910 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 ATG9AQ7Z3C6 839 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 TNMDQ9H2S6 317 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 BCL2L12Q9HB09 334 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 ATP6V1DQ9Y5K8 247 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 USP42Q9H9J4 1324 aaKnown RBP16.28■□□□□ 0.2
EBF3-201ENST00000355311 NKX2-3Q8TAU0 364 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 PGBD1Q96JS3 809 aa16.28■□□□□ 0.2
EBF3-201ENST00000355311 ZSCAN31Q96LW9 406 aaPredicted RBP16.28■□□□□ 0.2
EBF3-201ENST00000355311 SH2B1Q9NRF2 756 aaPredicted RBP16.28■□□□□ 0.2
EBF3-201ENST00000355311 HEG1Q9ULI3 1381 aa16.27■□□□□ 0.2
EBF3-201ENST00000355311 DNAJC10Q8IXB1 793 aa16.27■□□□□ 0.2
EBF3-201ENST00000355311 CHMP4AQ9BY43 222 aa16.27■□□□□ 0.2
EBF3-201ENST00000355311 COPRSQ9NQ92 184 aa16.27■□□□□ 0.2
EBF3-201ENST00000355311 PYCARDQ9ULZ3 195 aa16.27■□□□□ 0.2
EBF3-201ENST00000355311 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.2
EBF3-201ENST00000355311 M0R2C6 588 aa16.27■□□□□ 0.19
EBF3-201ENST00000355311 APPP05067 770 aa16.27■□□□□ 0.19
EBF3-201ENST00000355311 ATP5JP18859 108 aa16.27■□□□□ 0.19
EBF3-201ENST00000355311 SMIM5Q71RC9 77 aa16.27■□□□□ 0.19
EBF3-201ENST00000355311 CCDC82Q8N4S0 544 aa16.27■□□□□ 0.19
EBF3-201ENST00000355311 NUP62CLQ9H1M0 184 aa16.27■□□□□ 0.19
EBF3-201ENST00000355311 CWC25Q9NXE8 425 aaPredicted RBP16.27■□□□□ 0.19
EBF3-201ENST00000355311 PXDNLA1KZ92 1463 aa16.27■□□□□ 0.19
EBF3-201ENST00000355311 LRRC37A3O60309 1634 aa16.27■□□□□ 0.19
EBF3-201ENST00000355311 GTF2E1P29083 439 aaPredicted RBP16.26■□□□□ 0.19
EBF3-201ENST00000355311 PTPN21Q16825 1174 aa16.26■□□□□ 0.19
EBF3-201ENST00000355311 OSBP2Q969R2 916 aa16.26■□□□□ 0.19
EBF3-201ENST00000355311 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
EBF3-201ENST00000355311 LEO1Q8WVC0 666 aaPredicted RBP16.26■□□□□ 0.19
EBF3-201ENST00000355311 IQSEC3Q9UPP2 1182 aaPredicted RBP16.26■□□□□ 0.19
EBF3-201ENST00000355311 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
EBF3-201ENST00000355311 PTGS1P23219 599 aa16.26■□□□□ 0.19
EBF3-201ENST00000355311 HLFQ16534 295 aa16.26■□□□□ 0.19
EBF3-201ENST00000355311 CGNQ9P2M7 1197 aaKnown RBP16.26■□□□□ 0.19
EBF3-201ENST00000355311 KIF3AQ9Y496 699 aa16.25■□□□□ 0.19
EBF3-201ENST00000355311 UTRNP46939 3433 aa16.25■□□□□ 0.19
EBF3-201ENST00000355311 UBE2Q2LH0YL09 131 aa16.25■□□□□ 0.19
EBF3-201ENST00000355311 HSPD1P10809 573 aaKnown RBP16.25■□□□□ 0.19
EBF3-201ENST00000355311 ZAP70P43403 619 aa16.25■□□□□ 0.19
EBF3-201ENST00000355311 ARID5BQ14865 1188 aa16.25■□□□□ 0.19
EBF3-201ENST00000355311 HIP1O00291 1037 aa16.24■□□□□ 0.19
EBF3-201ENST00000355311 TYRO3Q06418 890 aa16.24■□□□□ 0.19
EBF3-201ENST00000355311 CCDC57Q2TAC2 916 aa16.24■□□□□ 0.19
EBF3-201ENST00000355311 TM6SF1Q9BZW5 370 aa16.24■□□□□ 0.19
EBF3-201ENST00000355311 BIN1O00499 593 aa16.24■□□□□ 0.19
EBF3-201ENST00000355311 MCM5P33992 734 aa16.24■□□□□ 0.19
EBF3-201ENST00000355311 AIFM3Q96NN9 605 aa16.24■□□□□ 0.19
EBF3-201ENST00000355311 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
EBF3-201ENST00000355311 CACNA1FO60840 1977 aa16.24■□□□□ 0.19
EBF3-201ENST00000355311 UTYO14607 1347 aa16.24■□□□□ 0.19
EBF3-201ENST00000355311 KCNQ4P56696 695 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 NAA30Q147X3 362 aaPredicted RBP16.23■□□□□ 0.19
EBF3-201ENST00000355311 MAP3K11Q16584 847 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 UTP14CQ5TAP6 766 aaKnown RBP16.23■□□□□ 0.19
EBF3-201ENST00000355311 KBTBD3Q8NAB2 608 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 HAUS7Q99871 368 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 PUS7LQ9H0K6 701 aaKnown RBP16.23■□□□□ 0.19
EBF3-201ENST00000355311 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 PTPDC1A2A3K4 754 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 TTC39AQ5SRH9 613 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms