RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 RABGGTAQ92696 567 aa12.32□□□□□ -0.44
PKP1-202ENST00000352845 CCDC34Q96HJ3 373 aa12.32□□□□□ -0.44
PKP1-202ENST00000352845 ANO2Q9NQ90 1003 aa12.32□□□□□ -0.44
PKP1-202ENST00000352845 DACT1Q9NYF0 836 aa12.32□□□□□ -0.44
PKP1-202ENST00000352845 LIG1P18858 919 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 ERCC3P19447 782 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 CHMLP26374 656 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 MNAT1P51948 309 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 ARID5BQ14865 1188 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 CAMK4Q16566 473 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 G2E3Q7L622 706 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 CKAP2LQ8IYA6 745 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 RNF217Q8TC41 542 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 HNRNPLLQ8WVV9 542 aaKnown RBP12.31□□□□□ -0.44
PKP1-202ENST00000352845 UPF3BQ9BZI7 483 aaKnown RBP12.31□□□□□ -0.44
PKP1-202ENST00000352845 DNAJC25Q9H1X3 360 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 CRB1P82279 1406 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
PKP1-202ENST00000352845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
PKP1-202ENST00000352845 MCM10Q7L590 875 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 NBPF11Q86T75 865 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 HOMER1Q86YM7 354 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 IL25Q9H293 177 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
PKP1-202ENST00000352845 CTAGE5O15320 804 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 HMMRO75330 724 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 HSPA4P34932 840 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 SSR1P43307 286 aaKnown RBP12.3□□□□□ -0.44
PKP1-202ENST00000352845 APOBRQ0VD83 1088 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 SGSM3Q96HU1 749 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 VPS18Q9P253 973 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 PTPRUQ92729 1446 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 ADGRL3Q9HAR2 1447 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 F6X3S4 739 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 H3BQF6 201 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 ERLIN2O94905 339 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 TUBB4BP68371 445 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 LONRF2Q1L5Z9 754 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 TTC6Q86TZ1 520 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 UNC5CLQ8IV45 518 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 DDX11Q96FC9 970 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 ZSCAN31Q96LW9 406 aaPredicted RBP12.3□□□□□ -0.44
PKP1-202ENST00000352845 TTC14Q96N46 770 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 MPHOSPH8Q99549 860 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 EID1Q9Y6B2 187 aa12.3□□□□□ -0.44
PKP1-202ENST00000352845 BECN2A8MW95 431 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 POTEB2H3BUK9 544 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 STX1AQ16623 288 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 HDXQ7Z353 690 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 MICALL1Q8N3F8 863 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 SH2B1Q9NRF2 756 aaPredicted RBP12.29□□□□□ -0.44
PKP1-202ENST00000352845 USP16Q9Y5T5 823 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.29□□□□□ -0.44
PKP1-202ENST00000352845 PSME1Q06323 249 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 EIF4A2Q14240 407 aaKnown RBP12.29□□□□□ -0.44
PKP1-202ENST00000352845 GORABQ5T7V8 394 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 LRRC31Q6UY01 552 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 RSRC2Q7L4I2 434 aaKnown RBP12.29□□□□□ -0.44
PKP1-202ENST00000352845 GIMAP7Q8NHV1 300 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 CARD6Q9BX69 1037 aa12.29□□□□□ -0.44
PKP1-202ENST00000352845 CEP170BQ9Y4F5 1589 aaPredicted RBP12.28□□□□□ -0.44
PKP1-202ENST00000352845 AKAP12Q02952 1782 aa12.28□□□□□ -0.44
PKP1-202ENST00000352845 KLHL33A6NCF5 533 aa12.28□□□□□ -0.44
PKP1-202ENST00000352845 URI1O94763 535 aaPredicted RBP12.28□□□□□ -0.44
PKP1-202ENST00000352845 PDCP20941 246 aa12.28□□□□□ -0.44
PKP1-202ENST00000352845 SFPQP23246 707 aaKnown RBP eCLIP12.28□□□□□ -0.44
PKP1-202ENST00000352845 IRX1P78414 480 aaPredicted RBP12.28□□□□□ -0.44
PKP1-202ENST00000352845 MAP9Q49MG5 647 aa12.28□□□□□ -0.44
PKP1-202ENST00000352845 POTEDQ86YR6 584 aa12.28□□□□□ -0.44
PKP1-202ENST00000352845 THEMISQ8N1K5 641 aaPredicted RBP12.28□□□□□ -0.44
PKP1-202ENST00000352845 FAM71BQ8TC56 605 aa12.28□□□□□ -0.44
PKP1-202ENST00000352845 ACBD3Q9H3P7 528 aa12.28□□□□□ -0.44
PKP1-202ENST00000352845 STAP2Q9UGK3 403 aa12.28□□□□□ -0.44
PKP1-202ENST00000352845 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
PKP1-202ENST00000352845 GJB2P29033 226 aa12.27□□□□□ -0.44
PKP1-202ENST00000352845 CCDC30Q5VVM6 783 aa12.27□□□□□ -0.44
PKP1-202ENST00000352845 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.44
PKP1-202ENST00000352845 FCHSD1Q86WN1 690 aa12.27□□□□□ -0.44
PKP1-202ENST00000352845 GOLGA1Q92805 767 aa12.27□□□□□ -0.44
PKP1-202ENST00000352845 COG3Q96JB2 828 aa12.27□□□□□ -0.44
PKP1-202ENST00000352845 PARD6BQ9BYG5 372 aa12.27□□□□□ -0.44
PKP1-202ENST00000352845 GNL3LQ9NVN8 582 aaKnown RBP12.27□□□□□ -0.44
PKP1-202ENST00000352845 PARP3Q9Y6F1 533 aa12.27□□□□□ -0.44
PKP1-202ENST00000352845 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.45
PKP1-202ENST00000352845 ERLIN1O75477 346 aa12.27□□□□□ -0.45
PKP1-202ENST00000352845 HNRNPH1P31943 449 aaKnown RBP12.27□□□□□ -0.45
PKP1-202ENST00000352845 TXLNAP40222 546 aa12.27□□□□□ -0.45
PKP1-202ENST00000352845 PPP2R5AQ15172 486 aa12.27□□□□□ -0.45
PKP1-202ENST00000352845 NBPF9Q3BBW0 867 aa12.27□□□□□ -0.45
PKP1-202ENST00000352845 NBPF10Q6P3W6 841 aaKnown RBP12.27□□□□□ -0.45
PKP1-202ENST00000352845 FOXR1Q6PIV2 292 aa12.27□□□□□ -0.45
PKP1-202ENST00000352845 GBP6Q6ZN66 633 aa12.27□□□□□ -0.45
PKP1-202ENST00000352845 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 TMCO5BA8MYB1 307 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 CCT4P50991 539 aaKnown RBP12.26□□□□□ -0.45
PKP1-202ENST00000352845 NEDD9Q14511 834 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 ZKSCAN8Q15776 578 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms