RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 TTC41PQ6P2S7 1318 aa12.32□□□□□ -0.44
SMPD4-201ENST00000351288 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
SMPD4-201ENST00000351288 AEBP2Q6ZN18 517 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-201ENST00000351288 CKAP2LQ8IYA6 745 aa12.31□□□□□ -0.44
SMPD4-201ENST00000351288 SPC24Q8NBT2 197 aa12.31□□□□□ -0.44
SMPD4-201ENST00000351288 SYAP1Q96A49 352 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-201ENST00000351288 NECTIN1Q15223 517 aa12.31□□□□□ -0.44
SMPD4-201ENST00000351288 TTC12Q9H892 705 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-201ENST00000351288 LRP2BPQ9P2M1 347 aa12.31□□□□□ -0.44
SMPD4-201ENST00000351288 AOX1Q06278 1338 aa12.31□□□□□ -0.44
SMPD4-201ENST00000351288 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
SMPD4-201ENST00000351288 ATP2B3Q16720 1220 aa12.31□□□□□ -0.44
SMPD4-201ENST00000351288 PAG1Q9NWQ8 432 aa12.31□□□□□ -0.44
SMPD4-201ENST00000351288 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.31□□□□□ -0.44
SMPD4-201ENST00000351288 MTMR6Q9Y217 621 aa12.31□□□□□ -0.44
SMPD4-201ENST00000351288 RGPD5Q99666 1765 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 A0A087WWV3 80 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 HLFQ16534 295 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 VPS53Q5VIR6 699 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 TULP1O00294 542 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-201ENST00000351288 ADORA1P30542 326 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 RXRAP19793 462 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 ITGA6P23229 1130 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 PTPN12Q05209 780 aaKnown RBP12.3□□□□□ -0.44
SMPD4-201ENST00000351288 MTX1Q13505 466 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 CARD10Q9BWT7 1032 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 RAI14Q9P0K7 980 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 ATP6V1DQ9Y5K8 247 aa12.3□□□□□ -0.44
SMPD4-201ENST00000351288 CACNA1FO60840 1977 aa12.29□□□□□ -0.44
SMPD4-201ENST00000351288 MINDY4BA8MYZ0 360 aa12.29□□□□□ -0.44
SMPD4-201ENST00000351288 EYA2O00167 538 aa12.29□□□□□ -0.44
SMPD4-201ENST00000351288 TTLL5Q6EMB2 1281 aa12.29□□□□□ -0.44
SMPD4-201ENST00000351288 TSC1Q92574 1164 aa12.29□□□□□ -0.44
SMPD4-201ENST00000351288 ZSWIM6Q9HCJ5 1215 aa12.29□□□□□ -0.44
SMPD4-201ENST00000351288 KDM6AO15550 1401 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-201ENST00000351288 RAD21O60216 631 aa12.29□□□□□ -0.44
SMPD4-201ENST00000351288 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-201ENST00000351288 WWC3Q9ULE0 1092 aa12.29□□□□□ -0.44
SMPD4-201ENST00000351288 KDM4FA0A1W2PPD8 638 aa12.28□□□□□ -0.44
SMPD4-201ENST00000351288 SLC9C2Q5TAH2 1124 aa12.28□□□□□ -0.44
SMPD4-201ENST00000351288 MAP4K1Q92918 833 aa12.28□□□□□ -0.44
SMPD4-201ENST00000351288 NEK1Q96PY6 1258 aa12.28□□□□□ -0.44
SMPD4-201ENST00000351288 FTOQ9C0B1 505 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMPD4-201ENST00000351288 MEGF6O75095 1541 aa12.28□□□□□ -0.44
SMPD4-201ENST00000351288 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
SMPD4-201ENST00000351288 IGHMBP2P38935 993 aaKnown RBP12.28□□□□□ -0.44
SMPD4-201ENST00000351288 KCNQ2O43526 872 aa12.27□□□□□ -0.44
SMPD4-201ENST00000351288 LIG1P18858 919 aa12.27□□□□□ -0.44
SMPD4-201ENST00000351288 LRRFIP1Q32MZ4 808 aaKnown RBP12.27□□□□□ -0.44
SMPD4-201ENST00000351288 Q6ZUG5 572 aa12.27□□□□□ -0.44
SMPD4-201ENST00000351288 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.44
SMPD4-201ENST00000351288 NUP133Q8WUM0 1156 aa12.27□□□□□ -0.44
SMPD4-201ENST00000351288 AIDAQ96BJ3 306 aa12.27□□□□□ -0.44
SMPD4-201ENST00000351288 GREM2Q9H772 168 aa12.27□□□□□ -0.44
SMPD4-201ENST00000351288 NCOA5Q9HCD5 579 aaKnown RBP12.27□□□□□ -0.44
SMPD4-201ENST00000351288 FAM13BQ9NYF5 915 aa12.27□□□□□ -0.44
SMPD4-201ENST00000351288 ERVV-2B6SEH9 535 aa12.27□□□□□ -0.45
SMPD4-201ENST00000351288 TCIRG1Q13488 830 aa12.27□□□□□ -0.45
SMPD4-201ENST00000351288 TTC6Q86TZ1 520 aa12.27□□□□□ -0.45
SMPD4-201ENST00000351288 ERCC4Q92889 916 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-201ENST00000351288 COL15A1P39059 1388 aa12.27□□□□□ -0.45
SMPD4-201ENST00000351288 TOM1O60784 492 aa12.27□□□□□ -0.45
SMPD4-201ENST00000351288 ADCY5O95622 1261 aa12.27□□□□□ -0.45
SMPD4-201ENST00000351288 MCMDC2Q4G0Z9 681 aa12.27□□□□□ -0.45
SMPD4-201ENST00000351288 CCDC191Q8NCU4 936 aa12.27□□□□□ -0.45
SMPD4-201ENST00000351288 XAGE2Q96GT9 111 aa12.27□□□□□ -0.45
SMPD4-201ENST00000351288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMPD4-201ENST00000351288 ZAP70P43403 619 aa12.26□□□□□ -0.45
SMPD4-201ENST00000351288 TDO2P48775 406 aa12.26□□□□□ -0.45
SMPD4-201ENST00000351288 APOBRQ0VD83 1088 aa12.26□□□□□ -0.45
SMPD4-201ENST00000351288 AKAP2Q9Y2D5 859 aa12.26□□□□□ -0.45
SMPD4-201ENST00000351288 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.26□□□□□ -0.454e-7■□□□□ 10.9
SMPD4-201ENST00000351288 TNS3Q68CZ2 1445 aa12.26□□□□□ -0.45
SMPD4-201ENST00000351288 TOB2Q14106 344 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-201ENST00000351288 TEX13AQ9BXU3 409 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-201ENST00000351288 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-201ENST00000351288 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-201ENST00000351288 TUBGCP6Q96RT7 1819 aa12.26□□□□□ -0.45
SMPD4-201ENST00000351288 CHD2O14647 1828 aaKnown RBP12.25□□□□□ -0.45
SMPD4-201ENST00000351288 G3V3G9 751 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 CCDC183Q5T5S1 534 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■■□□ 17.9
SMPD4-201ENST00000351288 HEG1Q9ULI3 1381 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 CYP21A2P08686 494 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 UBE2HP62256 183 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 HSP90AA2PQ14568 343 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-201ENST00000351288 PDLIM2Q96JY6 352 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 AP5Z1O43299 807 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 ZPR1O75312 459 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 CREBRFQ8IUR6 639 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 SEC31BQ9NQW1 1179 aa12.25□□□□□ -0.45
SMPD4-201ENST00000351288 POLR3DP05423 398 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-201ENST00000351288 RPS6KB1P23443 525 aa12.24□□□□□ -0.45
SMPD4-201ENST00000351288 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
SMPD4-201ENST00000351288 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
SMPD4-201ENST00000351288 ZKSCAN5Q9Y2L8 839 aa12.24□□□□□ -0.45
SMPD4-201ENST00000351288 IMMTQ16891 758 aaKnown RBP12.24□□□□□ -0.45
SMPD4-201ENST00000351288 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms