RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 LIMD1Q9UGP4 676 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 SOS1Q07889 1333 aaPredicted RBP6.47□□□□□ -1.37
VCAM1-202ENST00000347652 COL5A3P25940 1745 aaPredicted RBP6.46□□□□□ -1.37
VCAM1-202ENST00000347652 UBR3Q6ZT12 1888 aa6.46□□□□□ -1.37
VCAM1-202ENST00000347652 GIGYF1O75420 1035 aaPredicted RBP6.46□□□□□ -1.37
VCAM1-202ENST00000347652 TNNI2P48788 182 aa6.46□□□□□ -1.37
VCAM1-202ENST00000347652 VAC14Q08AM6 782 aa6.46□□□□□ -1.37
VCAM1-202ENST00000347652 TWISTNBQ3B726 338 aaPredicted RBP6.46□□□□□ -1.37
VCAM1-202ENST00000347652 LONRF3Q496Y0 759 aa6.46□□□□□ -1.37
VCAM1-202ENST00000347652 HOXB7P09629 217 aa6.46□□□□□ -1.38
VCAM1-202ENST00000347652 MCCP23508 829 aa6.46□□□□□ -1.38
VCAM1-202ENST00000347652 PDE4AP27815 886 aa6.46□□□□□ -1.38
VCAM1-202ENST00000347652 SSTR3P32745 418 aaPredicted RBP6.46□□□□□ -1.38
VCAM1-202ENST00000347652 PIP4K2AP48426 406 aaPredicted RBP6.46□□□□□ -1.38
VCAM1-202ENST00000347652 MNX1P50219 401 aaPredicted RBP6.46□□□□□ -1.38
VCAM1-202ENST00000347652 LDLRAD1Q5T700 205 aa6.46□□□□□ -1.38
VCAM1-202ENST00000347652 MAMSTRQ6ZN01 415 aa6.46□□□□□ -1.38
VCAM1-202ENST00000347652 FBXO33Q7Z6M2 555 aa6.46□□□□□ -1.38
VCAM1-202ENST00000347652 C11orf96Q7Z7L8 435 aa6.46□□□□□ -1.38
VCAM1-202ENST00000347652 COL23A1Q86Y22 540 aaPredicted RBP6.46□□□□□ -1.38
VCAM1-202ENST00000347652 ELL2O00472 640 aaPredicted RBP6.45□□□□□ -1.38
VCAM1-202ENST00000347652 PDIA6Q15084 440 aa6.45□□□□□ -1.38
VCAM1-202ENST00000347652 MSL1Q68DK7 614 aa6.45□□□□□ -1.38
VCAM1-202ENST00000347652 PRKAG2Q9UGJ0 569 aa6.45□□□□□ -1.38
VCAM1-202ENST00000347652 SOWAHDA6NJG2 315 aa6.45□□□□□ -1.38
VCAM1-202ENST00000347652 SNRPA1P09661 255 aaKnown RBP6.45□□□□□ -1.38
VCAM1-202ENST00000347652 CRKLP46109 303 aaKnown RBP6.45□□□□□ -1.38
VCAM1-202ENST00000347652 BIN2Q9UBW5 565 aaPredicted RBP6.45□□□□□ -1.38
VCAM1-202ENST00000347652 MRPL42Q9Y6G3 142 aaKnown RBP6.45□□□□□ -1.38
VCAM1-202ENST00000347652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 CLK2P49760 499 aaKnown RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 RARSP54136 660 aaKnown RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 BMS1Q14692 1282 aaKnown RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 INTS5Q6P9B9 1019 aaKnown RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 NOP9Q86U38 636 aaKnown RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 MTA3Q9BTC8 594 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 TMUB1Q9BVT8 246 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 ZSWIM4Q9H7M6 989 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 RCAN3Q9UKA8 241 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 USP16Q9Y5T5 823 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 ZNF831Q5JPB2 1677 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 CICQ96RK0 1608 aaPredicted RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 CYP19A1P11511 503 aaPredicted RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 ALDH1L2Q3SY69 923 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 TINF2Q9BSI4 451 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 ZBTB1Q9Y2K1 713 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 ATG7O95352 703 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 A1BGP04217 495 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 PTGER2P43116 358 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 FAM161BQ96MY7 647 aa6.44□□□□□ -1.38
VCAM1-202ENST00000347652 TEX13AQ9BXU3 409 aaPredicted RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 METTL14Q9HCE5 456 aaKnown RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 NAP1L2Q9ULW6 460 aaPredicted RBP6.44□□□□□ -1.38
VCAM1-202ENST00000347652 QSER1Q2KHR3 1735 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 LAMB4A4D0S4 1761 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 C4AP0C0L4 1744 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 FAM161AQ3B820 660 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 CLEC4GQ6UXB4 293 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 SSH1Q8WYL5 1049 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 SRP68Q9UHB9 627 aaKnown RBP6.43□□□□□ -1.38
VCAM1-202ENST00000347652 CNTNAP4Q9C0A0 1308 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 EIF2S2P20042 333 aaKnown RBP6.43□□□□□ -1.38
VCAM1-202ENST00000347652 TBX4P57082 545 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 CSPP1Q1MSJ5 1256 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 PLEKHG6Q3KR16 790 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 CCDC30Q5VVM6 783 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 KRBA2Q6ZNG9 492 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 MRPL50Q8N5N7 158 aaKnown RBP6.43□□□□□ -1.38
VCAM1-202ENST00000347652 MAF1Q9H063 256 aa6.43□□□□□ -1.38
VCAM1-202ENST00000347652 TMX4Q9H1E5 349 aaPredicted RBP6.43□□□□□ -1.38
VCAM1-202ENST00000347652 CCDC189A1A4V9 331 aa6.42□□□□□ -1.38
VCAM1-202ENST00000347652 BCAR3O75815 825 aa6.42□□□□□ -1.38
VCAM1-202ENST00000347652 TSHZ1Q6ZSZ6 1077 aa6.42□□□□□ -1.38
VCAM1-202ENST00000347652 RHBDL3P58872 404 aa6.42□□□□□ -1.38
VCAM1-202ENST00000347652 BANK1Q8NDB2 785 aa6.42□□□□□ -1.38
VCAM1-202ENST00000347652 MS4A4AQ96JQ5 239 aa6.42□□□□□ -1.38
VCAM1-202ENST00000347652 IRF2BPLQ9H1B7 796 aa6.42□□□□□ -1.38
VCAM1-202ENST00000347652 RNF19AQ9NV58 838 aa6.42□□□□□ -1.38
VCAM1-202ENST00000347652 CCDC87Q9NVE4 849 aa6.42□□□□□ -1.38
VCAM1-202ENST00000347652 RTCBQ9Y3I0 505 aaKnown RBP6.42□□□□□ -1.38
VCAM1-202ENST00000347652 LRP5O75197 1615 aa6.42□□□□□ -1.38
VCAM1-202ENST00000347652 ERBB4Q15303 1308 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 RNF123Q5XPI4 1314 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 TCERG1O14776 1098 aaKnown RBP6.41□□□□□ -1.38
VCAM1-202ENST00000347652 RPS6KA4O75676 772 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 STARD3NLO95772 234 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 VAMP1P23763 118 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 HIC1Q14526 733 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 NT5DC4Q86YG4 428 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 RAVER1Q8IY67 606 aaKnown RBP6.41□□□□□ -1.38
VCAM1-202ENST00000347652 MTFR1LQ9H019 292 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 SPON1Q9HCB6 807 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 SMC4Q9NTJ3 1288 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 DBF4Q9UBU7 674 aaPredicted RBP6.41□□□□□ -1.38
VCAM1-202ENST00000347652 COL4A3BPQ9Y5P4 624 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 MAFBQ9Y5Q3 323 aaPredicted RBP6.41□□□□□ -1.38
VCAM1-202ENST00000347652 NBPF26B4DH59 902 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 HOXA2O43364 376 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 ANXA1P04083 346 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 SSFA2P28290 1259 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms