RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GABPB2Q8TAK5 448 aaPredicted RBP21.94■■□□□ 1.1
HDAC4-201ENST00000345617 GOLGA8AA7E2F4 631 aa21.94■■□□□ 1.1
HDAC4-201ENST00000345617 SLC52A1Q9NWF4 448 aa21.94■■□□□ 1.1
HDAC4-201ENST00000345617 KRT13P13646 458 aa21.94■■□□□ 1.1
HDAC4-201ENST00000345617 CSRNP2Q9H175 543 aa21.94■■□□□ 1.1
HDAC4-201ENST00000345617 ERO1AQ96HE7 468 aa21.94■■□□□ 1.1
HDAC4-201ENST00000345617 TXNDC16Q9P2K2 825 aa21.94■■□□□ 1.1
HDAC4-201ENST00000345617 ZEB2O60315 1214 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 TAOK1Q7L7X3 1001 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 CCDC26Q8TAB7 109 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 IL16Q14005 1332 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 ARAP1Q96P48 1450 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 MAP7Q14244 749 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 PCK1P35558 622 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 NCOA7Q8NI08 942 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 CNNM2Q9H8M5 875 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 TTC22Q5TAA0 569 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 RABGAP1Q9Y3P9 1069 aa21.93■■□□□ 1.1
HDAC4-201ENST00000345617 HDAC1Q13547 482 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-201ENST00000345617 BIN1O00499 593 aa21.92■■□□□ 1.1
HDAC4-201ENST00000345617 ASXL1Q8IXJ9 1541 aa21.92■■□□□ 1.1
HDAC4-201ENST00000345617 XRCC6P12956 609 aaKnown RBP eCLIP21.92■■□□□ 1.1
HDAC4-201ENST00000345617 MTUS1Q9ULD2 1270 aa21.92■■□□□ 1.1
HDAC4-201ENST00000345617 IFIT3O14879 490 aaKnown RBP21.92■■□□□ 1.1
HDAC4-201ENST00000345617 GSTA5Q7RTV2 222 aa21.92■■□□□ 1.1
HDAC4-201ENST00000345617 IL1RAPL2Q9NP60 686 aa21.92■■□□□ 1.1
HDAC4-201ENST00000345617 IFIT5Q13325 482 aaKnown RBP21.92■■□□□ 1.1
HDAC4-201ENST00000345617 ZSCAN29Q8IWY8 852 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-201ENST00000345617 PUS7Q96PZ0 661 aaKnown RBP21.92■■□□□ 1.1
HDAC4-201ENST00000345617 PRAM1Q96QH2 718 aa21.92■■□□□ 1.1
HDAC4-201ENST00000345617 ZSWIM4Q9H7M6 989 aa21.92■■□□□ 1.1
HDAC4-201ENST00000345617 TRPC3Q13507 836 aa21.92■■□□□ 1.1
HDAC4-201ENST00000345617 DRC1Q96MC2 740 aa21.92■■□□□ 1.1
HDAC4-201ENST00000345617 CCDC42Q96M95 316 aa21.91■■□□□ 1.1
HDAC4-201ENST00000345617 AMOTQ4VCS5 1084 aa21.91■■□□□ 1.1
HDAC4-201ENST00000345617 MFSD6Q6ZSS7 791 aa21.91■■□□□ 1.1
HDAC4-201ENST00000345617 KRT23Q9C075 422 aa21.91■■□□□ 1.1
HDAC4-201ENST00000345617 INPP5BP32019 993 aa21.91■■□□□ 1.1
HDAC4-201ENST00000345617 CCDC62Q6P9F0 684 aa21.91■■□□□ 1.1
HDAC4-201ENST00000345617 PPP1R2P41236 205 aa21.91■■□□□ 1.1
HDAC4-201ENST00000345617 CDK19Q9BWU1 502 aa21.91■■□□□ 1.1
HDAC4-201ENST00000345617 AFAP1L2Q8N4X5 818 aa21.91■■□□□ 1.1
HDAC4-201ENST00000345617 ACTN4O43707 911 aaKnown RBP21.9■■□□□ 1.1
HDAC4-201ENST00000345617 ATP2C2O75185 946 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 CALCOCO2Q13137 446 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 WHAMMP3Q1A5X7 153 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 NUTM1Q86Y26 1132 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 PPFIA3O75145 1194 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 POLR3DP05423 398 aaPredicted RBP21.9■■□□□ 1.1
HDAC4-201ENST00000345617 MAP3K21Q5TCX8 1036 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.9■■□□□ 1.1
HDAC4-201ENST00000345617 MYH10P35580 1976 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 LUC7L3O95232 432 aaKnown RBP21.9■■□□□ 1.1
HDAC4-201ENST00000345617 NEDD9Q14511 834 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 KRBA2Q6ZNG9 492 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 RBM42Q9BTD8 480 aaKnown RBP21.9■■□□□ 1.1
HDAC4-201ENST00000345617 PLCB1Q9NQ66 1216 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 NUF2Q9BZD4 464 aa21.9■■□□□ 1.1
HDAC4-201ENST00000345617 TYRO3Q06418 890 aa21.89■■□□□ 1.1
HDAC4-201ENST00000345617 SSH1Q8WYL5 1049 aa21.89■■□□□ 1.1
HDAC4-201ENST00000345617 ECHDC1Q9NTX5 307 aa21.89■■□□□ 1.1
HDAC4-201ENST00000345617 NPHP3Q7Z494 1330 aa21.89■■□□□ 1.1
HDAC4-201ENST00000345617 IQGAP2Q13576 1575 aa21.89■■□□□ 1.1
HDAC4-201ENST00000345617 CLNS1AP54105 237 aaKnown RBP21.89■■□□□ 1.1
HDAC4-201ENST00000345617 SELENOSQ9BQE4 189 aa21.89■■□□□ 1.1
HDAC4-201ENST00000345617 WDHD1O75717 1129 aaPredicted RBP21.89■■□□□ 1.09
HDAC4-201ENST00000345617 INTS4Q96HW7 963 aaKnown RBP21.89■■□□□ 1.09
HDAC4-201ENST00000345617 MRPS9P82933 396 aaKnown RBP21.89■■□□□ 1.09
HDAC4-201ENST00000345617 ZNF365Q70YC5 407 aa21.89■■□□□ 1.09
HDAC4-201ENST00000345617 ZNF444Q8N0Y2 327 aaPredicted RBP21.89■■□□□ 1.09
HDAC4-201ENST00000345617 TMEM67Q5HYA8 995 aa21.89■■□□□ 1.09
HDAC4-201ENST00000345617 SNX16P57768 344 aa21.89■■□□□ 1.09
HDAC4-201ENST00000345617 PPFIA1Q13136 1202 aa21.89■■□□□ 1.09
HDAC4-201ENST00000345617 GBP7Q8N8V2 638 aaPredicted RBP21.88■■□□□ 1.09
HDAC4-201ENST00000345617 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
HDAC4-201ENST00000345617 MINDY4BA8MYZ0 360 aa21.88■■□□□ 1.09
HDAC4-201ENST00000345617 CRACR2BQ8N4Y2 399 aaPredicted RBP21.88■■□□□ 1.09
HDAC4-201ENST00000345617 CCDC63Q8NA47 563 aa21.88■■□□□ 1.09
HDAC4-201ENST00000345617 RAD50Q92878 1312 aa21.88■■□□□ 1.09
HDAC4-201ENST00000345617 WDR78Q5VTH9 848 aa21.88■■□□□ 1.09
HDAC4-201ENST00000345617 VCX3AQ9NNX9 186 aa21.88■■□□□ 1.09
HDAC4-201ENST00000345617 SEC62Q99442 399 aaKnown RBP21.88■■□□□ 1.09
HDAC4-201ENST00000345617 IMPG2Q9BZV3 1241 aa21.88■■□□□ 1.09
HDAC4-201ENST00000345617 GAS8O95995 478 aa21.88■■□□□ 1.09
HDAC4-201ENST00000345617 RUFY4Q6ZNE9 571 aa21.88■■□□□ 1.09
HDAC4-201ENST00000345617 DUSP27Q5VZP5 1158 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 ABCF2Q9UG63 623 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 BRAPQ7Z569 592 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 NCOA1Q15788 1441 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 TTC21BQ7Z4L5 1316 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 NUCB1Q02818 461 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 NEK1Q96PY6 1258 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 GOLGA6CA6NDK9 693 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 GOLGA6DP0CG33 693 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 APBB1IPQ7Z5R6 666 aaPredicted RBP21.87■■□□□ 1.09
HDAC4-201ENST00000345617 IFT20Q8IY31 132 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 GOLGA6AQ9NYA3 693 aa21.87■■□□□ 1.09
HDAC4-201ENST00000345617 UTP11Q9Y3A2 253 aaKnown RBP21.87■■□□□ 1.09
HDAC4-201ENST00000345617 CEP85LQ5SZL2 805 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms