RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SYNMO15061 1565 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 ADAMTS2O95450 1211 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 NDUFB9Q9Y6M9 179 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 TTC37Q6PGP7 1564 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 ARHGEF10O15013 1369 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 GIGYF1O75420 1035 aaPredicted RBP8.31□□□□□ -1.08
VCAN-202ENST00000342785 MEX3CQ5U5Q3 659 aaKnown RBP8.31□□□□□ -1.08
VCAN-202ENST00000342785 CATIPQ7Z7H3 387 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 PKNOX2Q96KN3 472 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 PRR36Q9H6K5 1346 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 FSD2A1L4K1 749 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 SNW1Q13573 536 aaKnown RBP8.31□□□□□ -1.08
VCAN-202ENST00000342785 UNC5CLQ8IV45 518 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 HELBQ8NG08 1087 aaPredicted RBP8.31□□□□□ -1.08
VCAN-202ENST00000342785 EDC3Q96F86 508 aaKnown RBP8.31□□□□□ -1.08
VCAN-202ENST00000342785 TANGO6Q9C0B7 1094 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 LMOD1P29536 600 aaPredicted RBP8.31□□□□□ -1.08
VCAN-202ENST00000342785 KIF4BQ2VIQ3 1234 aa8.31□□□□□ -1.08
VCAN-202ENST00000342785 NOM1Q5C9Z4 860 aaKnown RBP8.3□□□□□ -1.08
VCAN-202ENST00000342785 BEND3Q5T5X7 828 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 BMP2KQ9NSY1 1161 aaPredicted RBP8.3□□□□□ -1.08
VCAN-202ENST00000342785 BCORL1Q5H9F3 1711 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 USP5P45974 858 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 STAP2Q9UGK3 403 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 PLXNC1O60486 1568 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 MLH3Q9UHC1 1453 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 CCDC194A0A1B0GVG4 234 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 NLRP5P59047 1200 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 WTAPQ15007 396 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 PPP4R3BQ5MIZ7 849 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 CEP135Q66GS9 1140 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 CDC5LQ99459 802 aaKnown RBP8.3□□□□□ -1.08
VCAN-202ENST00000342785 HSP90AA4PQ58FG1 418 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 AXDND1Q5T1B0 1012 aaPredicted RBP8.3□□□□□ -1.08
VCAN-202ENST00000342785 RASEFQ8IZ41 740 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 FAM89AQ96GI7 184 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 A0A1B0GUL7 405 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 DZIP1Q86YF9 867 aaKnown RBP8.3□□□□□ -1.08
VCAN-202ENST00000342785 KBTBD3Q8NAB2 608 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 PLBD2Q8NHP8 589 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 PAXBP1Q9Y5B6 917 aa8.3□□□□□ -1.08
VCAN-202ENST00000342785 IBTKQ9P2D0 1353 aaPredicted RBP8.3□□□□□ -1.08
VCAN-202ENST00000342785 IL2RBP14784 551 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 UBASH3AP57075 661 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 PTH1RQ03431 593 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 CCDC150Q8NCX0 1101 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 NCOA5Q9HCD5 579 aaKnown RBP8.29□□□□□ -1.08
VCAN-202ENST00000342785 KIF5CO60282 957 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 LUC7LQ9NQ29 371 aaKnown RBP8.29□□□□□ -1.08
VCAN-202ENST00000342785 CGNQ9P2M7 1197 aaKnown RBP8.29□□□□□ -1.08
VCAN-202ENST00000342785 IGSF1Q8N6C5 1336 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 CWC15Q9P013 229 aaKnown RBP8.29□□□□□ -1.08
VCAN-202ENST00000342785 FAM135BQ49AJ0 1406 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 A1BGP04217 495 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 GNG11P61952 73 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 TMTC2Q8N394 836 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 SLC52A2Q9HAB3 445 aa8.29□□□□□ -1.08
VCAN-202ENST00000342785 KDM5AP29375 1690 aaKnown RBP8.28□□□□□ -1.08
VCAN-202ENST00000342785 EIF3JO75822 258 aaKnown RBP8.28□□□□□ -1.08
VCAN-202ENST00000342785 PRKCSHP14314 528 aaPredicted RBP8.28□□□□□ -1.08
VCAN-202ENST00000342785 CYP7A1P22680 504 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 ME3Q16798 604 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 LEO1Q8WVC0 666 aaPredicted RBP8.28□□□□□ -1.08
VCAN-202ENST00000342785 HELLSQ9NRZ9 838 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 A0A1B0GVL5 298 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 FAM160A1Q05DH4 1040 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 RTN1Q16799 776 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 OTUD7BQ6GQQ9 843 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 ZNF444Q8N0Y2 327 aaPredicted RBP8.28□□□□□ -1.08
VCAN-202ENST00000342785 KRT23Q9C075 422 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 ZNF287Q9HBT7 754 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 SPDYE4A6NLX3 237 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 ESR2Q92731 530 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 SLC4A4Q9Y6R1 1079 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 TSPY2A6NKD2 308 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 JAK2O60674 1132 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 ZPR1O75312 459 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 RXRAP19793 462 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 UBA7P41226 1012 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 CCDC181Q5TID7 509 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 KANK3Q6NY19 840 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 PPP1R9BQ96SB3 815 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 IRS4O14654 1257 aaPredicted RBP8.28□□□□□ -1.08
VCAN-202ENST00000342785 CT47A1Q5JQC4 288 aaPredicted RBP8.28□□□□□ -1.08
VCAN-202ENST00000342785 LEKR1Q6ZMV7 388 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 KIAA1328Q86T90 577 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 ZNF594Q96JF6 807 aaPredicted RBP8.28□□□□□ -1.08
VCAN-202ENST00000342785 CNNM2Q9H8M5 875 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 ATP5JP18859 108 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 CDR1P51861 262 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 SKIDA1Q1XH10 827 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 C17orf53Q8N3J3 647 aaPredicted RBP8.28□□□□□ -1.08
VCAN-202ENST00000342785 GPT2Q8TD30 523 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 DNAI1Q9UI46 699 aa8.28□□□□□ -1.08
VCAN-202ENST00000342785 BRAPQ7Z569 592 aa8.27□□□□□ -1.08
VCAN-202ENST00000342785 ANKIB1Q9P2G1 1089 aa8.27□□□□□ -1.08
VCAN-202ENST00000342785 MTMR6Q9Y217 621 aa8.27□□□□□ -1.08
VCAN-202ENST00000342785 SSH2Q76I76 1423 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 A0A0D9SFI3 127 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 311.8 ms