RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 RREB1Q92766 1687 aa18.14■□□□□ 0.49
BRAT1-201ENST00000340611 RAB11FIP3O75154 756 aa18.14■□□□□ 0.49
BRAT1-201ENST00000340611 TBC1D9Q6ZT07 1266 aa18.14■□□□□ 0.49
BRAT1-201ENST00000340611 ZFP91Q96JP5 570 aaPredicted RBP18.14■□□□□ 0.49
BRAT1-201ENST00000340611 LETM1O95202 739 aaPredicted RBP18.12■□□□□ 0.49
BRAT1-201ENST00000340611 TXNRD1Q16881 649 aa18.12■□□□□ 0.49
BRAT1-201ENST00000340611 RILPL2Q969X0 211 aa18.12■□□□□ 0.49
BRAT1-201ENST00000340611 NDUFB9Q9Y6M9 179 aa18.12■□□□□ 0.49
BRAT1-201ENST00000340611 TRIM6-TRIM34B2RNG4 842 aa18.12■□□□□ 0.49
BRAT1-201ENST00000340611 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.12■□□□□ 0.49
BRAT1-201ENST00000340611 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
BRAT1-201ENST00000340611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.12■□□□□ 0.49
BRAT1-201ENST00000340611 SASS6Q6UVJ0 657 aa18.12■□□□□ 0.49
BRAT1-201ENST00000340611 CLASRPQ8N2M8 674 aaKnown RBP18.12■□□□□ 0.49
BRAT1-201ENST00000340611 TTLL11Q8NHH1 800 aa18.12■□□□□ 0.49
BRAT1-201ENST00000340611 COPRSQ9NQ92 184 aa18.12■□□□□ 0.49
BRAT1-201ENST00000340611 ZPR1O75312 459 aa18.11■□□□□ 0.49
BRAT1-201ENST00000340611 C3orf67Q6ZVT6 689 aa18.11■□□□□ 0.49
BRAT1-201ENST00000340611 CCDC57Q2TAC2 916 aa18.11■□□□□ 0.49
BRAT1-201ENST00000340611 ATG9AQ7Z3C6 839 aa18.11■□□□□ 0.49
BRAT1-201ENST00000340611 UTP14AQ9BVJ6 771 aaKnown RBP18.11■□□□□ 0.49
BRAT1-201ENST00000340611 GOLGA6L22H0YM25 854 aa18.1■□□□□ 0.49
BRAT1-201ENST00000340611 ERFEQ4G0M1 354 aa18.1■□□□□ 0.49
BRAT1-201ENST00000340611 HSP90AB4PQ58FF6 505 aa18.1■□□□□ 0.49
BRAT1-201ENST00000340611 SEC31BQ9NQW1 1179 aa18.1■□□□□ 0.49
BRAT1-201ENST00000340611 CICQ96RK0 1608 aaPredicted RBP18.1■□□□□ 0.49
BRAT1-201ENST00000340611 BAG4O95429 457 aaKnown RBP18.1■□□□□ 0.49
BRAT1-201ENST00000340611 NTSR2O95665 410 aa18.1■□□□□ 0.49
BRAT1-201ENST00000340611 IFIT2P09913 472 aaKnown RBP18.1■□□□□ 0.49
BRAT1-201ENST00000340611 ITGA6P23229 1130 aa18.1■□□□□ 0.49
BRAT1-201ENST00000340611 RFC4P35249 363 aa18.1■□□□□ 0.49
BRAT1-201ENST00000340611 MPNDQ8N594 471 aa18.1■□□□□ 0.49
BRAT1-201ENST00000340611 TAF1P21675 1872 aa18.1■□□□□ 0.49
BRAT1-201ENST00000340611 CTSWP56202 376 aa18.09■□□□□ 0.49
BRAT1-201ENST00000340611 TIMM10P62072 90 aa18.09■□□□□ 0.49
BRAT1-201ENST00000340611 RC3H1Q5TC82 1133 aaKnown RBP18.09■□□□□ 0.49
BRAT1-201ENST00000340611 NARFQ9UHQ1 456 aa18.09■□□□□ 0.49
BRAT1-201ENST00000340611 NOL7Q9UMY1 257 aaKnown RBP18.09■□□□□ 0.49
BRAT1-201ENST00000340611 SH3TC1Q8TE82 1336 aa18.09■□□□□ 0.49
BRAT1-201ENST00000340611 TRAPPC3LQ5T215 181 aa18.09■□□□□ 0.49
BRAT1-201ENST00000340611 ZNF771Q7L3S4 317 aaPredicted RBP18.09■□□□□ 0.49
BRAT1-201ENST00000340611 MCTP1Q6DN14 999 aa18.09■□□□□ 0.49
BRAT1-201ENST00000340611 PI4K2BQ8TCG2 481 aa18.09■□□□□ 0.49
BRAT1-201ENST00000340611 ZNF831Q5JPB2 1677 aa18.08■□□□□ 0.48
BRAT1-201ENST00000340611 SNAP23O00161 211 aa18.08■□□□□ 0.48
BRAT1-201ENST00000340611 ZNF500O60304 480 aaPredicted RBP18.08■□□□□ 0.48
BRAT1-201ENST00000340611 IFIT5Q13325 482 aaKnown RBP18.08■□□□□ 0.48
BRAT1-201ENST00000340611 ZNF827Q17R98 1081 aa18.08■□□□□ 0.48
BRAT1-201ENST00000340611 NEUROD6Q96NK8 337 aa18.08■□□□□ 0.48
BRAT1-201ENST00000340611 ZNF652Q9Y2D9 606 aa18.08■□□□□ 0.48
BRAT1-201ENST00000340611 CSF1RP07333 972 aa18.07■□□□□ 0.48
BRAT1-201ENST00000340611 CAVIN1Q6NZI2 390 aaKnown RBP18.07■□□□□ 0.48
BRAT1-201ENST00000340611 HELBQ8NG08 1087 aaPredicted RBP18.07■□□□□ 0.48
BRAT1-201ENST00000340611 EDC3Q96F86 508 aaKnown RBP18.07■□□□□ 0.48
BRAT1-201ENST00000340611 PDE8AO60658 829 aa18.07■□□□□ 0.48
BRAT1-201ENST00000340611 PTMSP20962 102 aa18.07■□□□□ 0.48
BRAT1-201ENST00000340611 DBNDD2Q9BQY9 259 aa18.07■□□□□ 0.48
BRAT1-201ENST00000340611 MYH3P11055 1940 aa18.07■□□□□ 0.48
BRAT1-201ENST00000340611 BCORQ6W2J9 1755 aa18.07■□□□□ 0.48
BRAT1-201ENST00000340611 SRCAPQ6ZRS2 3230 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 KLHL40Q2TBA0 621 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 ERC1Q8IUD2 1116 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 OSBPL3Q9H4L5 887 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 DBNLQ9UJU6 430 aaKnown RBP18.06■□□□□ 0.48
BRAT1-201ENST00000340611 COL4A1P02462 1669 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 CDHR2Q9BYE9 1310 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 TNNI3KQ59H18 835 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 SLC51AQ86UW1 340 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 ZNF710Q8N1W2 664 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 BOLA2Q9H3K6 86 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 FPGT-TNNI3KV9GXZ4 949 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 C4AP0C0L4 1744 aa18.06■□□□□ 0.48
BRAT1-201ENST00000340611 EYA2O00167 538 aa18.05■□□□□ 0.48
BRAT1-201ENST00000340611 STAP2Q9UGK3 403 aa18.05■□□□□ 0.48
BRAT1-201ENST00000340611 PKP1Q13835 747 aa18.05■□□□□ 0.48
BRAT1-201ENST00000340611 SETDB2Q96T68 719 aa18.05■□□□□ 0.48
BRAT1-201ENST00000340611 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
BRAT1-201ENST00000340611 CDC45O75419 566 aa18.05■□□□□ 0.48
BRAT1-201ENST00000340611 KCNJ4P48050 445 aa18.05■□□□□ 0.48
BRAT1-201ENST00000340611 EN1Q05925 392 aaPredicted RBP18.05■□□□□ 0.48
BRAT1-201ENST00000340611 CSPP1Q1MSJ5 1256 aa18.05■□□□□ 0.48
BRAT1-201ENST00000340611 LDHAL6AQ6ZMR3 332 aa18.05■□□□□ 0.48
BRAT1-201ENST00000340611 PLA2G12BQ9BX93 195 aa18.05■□□□□ 0.48
BRAT1-201ENST00000340611 USP42Q9H9J4 1324 aaKnown RBP18.04■□□□□ 0.48
BRAT1-201ENST00000340611 IL25Q9H293 177 aa18.04■□□□□ 0.48
BRAT1-201ENST00000340611 NPHP1O15259 732 aa18.04■□□□□ 0.48
BRAT1-201ENST00000340611 PARP10Q53GL7 1025 aa18.04■□□□□ 0.48
BRAT1-201ENST00000340611 CLEC4GQ6UXB4 293 aa18.04■□□□□ 0.48
BRAT1-201ENST00000340611 NBPF5PQ86XG9 351 aaPredicted RBP18.04■□□□□ 0.48
BRAT1-201ENST00000340611 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
BRAT1-201ENST00000340611 ZKSCAN5Q9Y2L8 839 aa18.04■□□□□ 0.48
BRAT1-201ENST00000340611 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
BRAT1-201ENST00000340611 CHGBP05060 677 aa18.03■□□□□ 0.48
BRAT1-201ENST00000340611 ZBTB9Q96C00 473 aa18.03■□□□□ 0.48
BRAT1-201ENST00000340611 DDX60Q8IY21 1712 aaKnown RBP18.03■□□□□ 0.48
BRAT1-201ENST00000340611 NFIXQ14938 502 aa18.03■□□□□ 0.48
BRAT1-201ENST00000340611 CNNM1Q9NRU3 951 aa18.03■□□□□ 0.48
BRAT1-201ENST00000340611 ECHDC1Q9NTX5 307 aa18.03■□□□□ 0.48
BRAT1-201ENST00000340611 ANKRD18BA2A2Z9 1011 aa18.02■□□□□ 0.48
BRAT1-201ENST00000340611 WTIPA6NIX2 430 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms