RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 BRINP3Q76B58 766 aa14.13□□□□□ -0.15
CCDC144CP-201ENST00000340196 CHST3Q7LGC8 479 aa14.13□□□□□ -0.15
CCDC144CP-201ENST00000340196 SPATA31A3Q5VYP0 1347 aa14.13□□□□□ -0.15
CCDC144CP-201ENST00000340196 SLAIN2Q9P270 581 aa14.13□□□□□ -0.15
CCDC144CP-201ENST00000340196 RGPD2P0DJD1 1756 aa14.13□□□□□ -0.15
CCDC144CP-201ENST00000340196 DDX46Q7L014 1031 aaKnown RBP14.12□□□□□ -0.15
CCDC144CP-201ENST00000340196 CLIP2Q9UDT6 1046 aa14.12□□□□□ -0.15
CCDC144CP-201ENST00000340196 TNNT1P13805 278 aa14.12□□□□□ -0.15
CCDC144CP-201ENST00000340196 Q6ZUG5 572 aa14.12□□□□□ -0.15
CCDC144CP-201ENST00000340196 DDX17Q92841 729 aaKnown RBP14.12□□□□□ -0.15
CCDC144CP-201ENST00000340196 NCOA5Q9HCD5 579 aaKnown RBP14.12□□□□□ -0.15
CCDC144CP-201ENST00000340196 ABCC6O95255 1503 aa14.12□□□□□ -0.15
CCDC144CP-201ENST00000340196 TAF5LO75529 589 aa14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 CCT2P78371 535 aaKnown RBP14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 GOLPH3LQ9H4A5 285 aa14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 CLSTN2Q9H4D0 955 aa14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 TRMT1Q9NXH9 659 aaKnown RBP14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 COL18A1P39060 1754 aa14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 GOLGA6L6A8MZA4 724 aa14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 RNMTO43148 476 aaKnown RBP14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 FILIP1Q7Z7B0 1213 aa14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 DBNLQ9UJU6 430 aaKnown RBP14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
CCDC144CP-201ENST00000340196 NPHP1O15259 732 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 STOX1Q6ZVD7 989 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 PLA2G4DQ86XP0 818 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 RGPD5Q99666 1765 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 SOS2Q07890 1332 aaPredicted RBP14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 PSMA5P28066 241 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 SCRN1Q12765 414 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 RIC3Q7Z5B4 369 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 ANKRD7Q92527 254 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 MED23Q9ULK4 1368 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 LMO7Q8WWI1 1683 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 H3BQV1 296 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 CYP21A2P08686 494 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 TFCP2Q12800 502 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 RESTQ13127 1097 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 TPD52L1Q16890 204 aaPredicted RBP14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 IFFO2Q5TF58 517 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 RAB11FIP4Q86YS3 637 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 MYD88Q99836 296 aa14.1□□□□□ -0.15
CCDC144CP-201ENST00000340196 ATP5J2-PTCD1G3V325 749 aa14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 PTCD1O75127 700 aaKnown RBP14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 SCAND2PQ9GZW5 306 aaPredicted RBP14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 BABAM1Q9NWV8 329 aa14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 AXIN2Q9Y2T1 843 aa14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 CACNA1FO60840 1977 aa14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 ELP1O95163 1332 aa14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 CTIFO43310 598 aaKnown RBP14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 PDIA6Q15084 440 aa14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 AKAP4Q5JQC9 854 aa14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 GTF3C6Q969F1 213 aa14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 DBNDD2Q9BQY9 259 aa14.09□□□□□ -0.15
CCDC144CP-201ENST00000340196 APOBRQ0VD83 1088 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 C1orf141Q5JVX7 400 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 OTUD7BQ6GQQ9 843 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 ERC1Q8IUD2 1116 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 LINS1Q8NG48 757 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 CPDO75976 1380 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 ZNF609O15014 1411 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 KIF20AO95235 890 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 PDCP20941 246 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 RNF20Q5VTR2 975 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 XAGE3Q8WTP9 111 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 NEK1Q96PY6 1258 aa14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 GPHNQ9NQX3 736 aaPredicted RBP14.08□□□□□ -0.16
CCDC144CP-201ENST00000340196 ALDH1L1O75891 902 aa14.07□□□□□ -0.16
CCDC144CP-201ENST00000340196 TDRD7Q8NHU6 1098 aaKnown RBP14.07□□□□□ -0.16
CCDC144CP-201ENST00000340196 ANKRD24Q8TF21 1146 aa14.07□□□□□ -0.16
CCDC144CP-201ENST00000340196 GJB4Q9NTQ9 266 aa14.07□□□□□ -0.16
CCDC144CP-201ENST00000340196 NHSL1Q5SYE7 1610 aa14.07□□□□□ -0.16
CCDC144CP-201ENST00000340196 PTPN21Q16825 1174 aa14.07□□□□□ -0.16
CCDC144CP-201ENST00000340196 COPS6Q7L5N1 327 aa14.07□□□□□ -0.16
CCDC144CP-201ENST00000340196 USP28Q96RU2 1077 aa14.07□□□□□ -0.16
CCDC144CP-201ENST00000340196 DDX19AQ9NUU7 478 aaKnown RBP14.07□□□□□ -0.16
CCDC144CP-201ENST00000340196 UBE3BQ7Z3V4 1068 aa14.06□□□□□ -0.16
CCDC144CP-201ENST00000340196 GTPBP4Q9BZE4 634 aaKnown RBP14.06□□□□□ -0.16
CCDC144CP-201ENST00000340196 ERBB3P21860 1342 aa14.06□□□□□ -0.16
CCDC144CP-201ENST00000340196 CTDNEP1O95476 244 aa14.06□□□□□ -0.16
CCDC144CP-201ENST00000340196 HOXB7P09629 217 aa14.06□□□□□ -0.16
CCDC144CP-201ENST00000340196 IQCB1Q15051 598 aa14.06□□□□□ -0.16
CCDC144CP-201ENST00000340196 CCAR1Q8IX12 1150 aaKnown RBP14.06□□□□□ -0.16
CCDC144CP-201ENST00000340196 ADD1P35611 737 aaKnown RBP14.05□□□□□ -0.16
CCDC144CP-201ENST00000340196 PLEKHO1Q53GL0 409 aaPredicted RBP14.05□□□□□ -0.16
CCDC144CP-201ENST00000340196 RBM43Q6ZSC3 357 aaKnown RBP14.05□□□□□ -0.16
CCDC144CP-201ENST00000340196 NEURL1BA8MQ27 555 aa14.05□□□□□ -0.16
CCDC144CP-201ENST00000340196 KDM3BQ7LBC6 1761 aa14.05□□□□□ -0.16
CCDC144CP-201ENST00000340196 ZC3H6P61129 1189 aaKnown RBP14.05□□□□□ -0.16
CCDC144CP-201ENST00000340196 ISM2Q6H9L7 571 aa14.05□□□□□ -0.16
CCDC144CP-201ENST00000340196 LRRC8AQ8IWT6 810 aa14.05□□□□□ -0.16
CCDC144CP-201ENST00000340196 ST7Q9NRC1 585 aa14.05□□□□□ -0.16
CCDC144CP-201ENST00000340196 ZNF215Q9UL58 517 aaPredicted RBP14.05□□□□□ -0.16
CCDC144CP-201ENST00000340196 ANKRD1Q15327 319 aa14.04□□□□□ -0.16
CCDC144CP-201ENST00000340196 HSP90AB3PQ58FF7 597 aa14.04□□□□□ -0.16
CCDC144CP-201ENST00000340196 TNNI3KQ59H18 835 aa14.04□□□□□ -0.16
CCDC144CP-201ENST00000340196 TTLL5Q6EMB2 1281 aa14.04□□□□□ -0.16
CCDC144CP-201ENST00000340196 AOPEPQ8N6M6 819 aa14.04□□□□□ -0.16
CCDC144CP-201ENST00000340196 LRRN4CLQ8ND94 238 aa14.04□□□□□ -0.16
CCDC144CP-201ENST00000340196 CCDC112Q8NEF3 446 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms