RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 IFIT5Q13325 482 aaKnown RBP11.48□□□□□ -0.57
MSL3-202ENST00000337339 METTL24Q5JXM2 366 aa11.48□□□□□ -0.57
MSL3-202ENST00000337339 LDHAL6AQ6ZMR3 332 aa11.48□□□□□ -0.57
MSL3-202ENST00000337339 HAUS7Q99871 368 aa11.48□□□□□ -0.57
MSL3-202ENST00000337339 BTG4Q9NY30 223 aa11.48□□□□□ -0.57
MSL3-202ENST00000337339 HMG20BQ9P0W2 317 aa11.48□□□□□ -0.57
MSL3-202ENST00000337339 IDH1O75874 414 aaKnown RBP11.48□□□□□ -0.57
MSL3-202ENST00000337339 FOXO4P98177 505 aa11.48□□□□□ -0.57
MSL3-202ENST00000337339 NUP62CLQ9H1M0 184 aa11.48□□□□□ -0.57
MSL3-202ENST00000337339 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
MSL3-202ENST00000337339 TOMM22Q9NS69 142 aa11.48□□□□□ -0.57
MSL3-202ENST00000337339 WDR17Q8IZU2 1322 aa11.47□□□□□ -0.57
MSL3-202ENST00000337339 ZNF335Q9H4Z2 1342 aaPredicted RBP11.47□□□□□ -0.57
MSL3-202ENST00000337339 GPHNQ9NQX3 736 aaPredicted RBP11.47□□□□□ -0.57
MSL3-202ENST00000337339 FAM13BQ9NYF5 915 aa11.47□□□□□ -0.57
MSL3-202ENST00000337339 H7C1W4 665 aa11.47□□□□□ -0.57
MSL3-202ENST00000337339 CCDC192P0DO97 292 aa11.47□□□□□ -0.57
MSL3-202ENST00000337339 OTUD7BQ6GQQ9 843 aa11.47□□□□□ -0.57
MSL3-202ENST00000337339 LRP10Q7Z4F1 713 aa11.47□□□□□ -0.57
MSL3-202ENST00000337339 FTOQ9C0B1 505 aaKnown RBP eCLIP11.47□□□□□ -0.57
MSL3-202ENST00000337339 ATG9AQ7Z3C6 839 aa11.47□□□□□ -0.57
MSL3-202ENST00000337339 HOMEZQ8IX15 550 aa11.47□□□□□ -0.57
MSL3-202ENST00000337339 CCDC191Q8NCU4 936 aa11.47□□□□□ -0.57
MSL3-202ENST00000337339 TRMT112Q9UI30 125 aaKnown RBP11.47□□□□□ -0.57
MSL3-202ENST00000337339 NOL7Q9UMY1 257 aaKnown RBP11.47□□□□□ -0.57
MSL3-202ENST00000337339 ZKSCAN5Q9Y2L8 839 aa11.47□□□□□ -0.57
MSL3-202ENST00000337339 STARD3NLO95772 234 aa11.46□□□□□ -0.57
MSL3-202ENST00000337339 MAP3K11Q16584 847 aa11.46□□□□□ -0.57
MSL3-202ENST00000337339 XAGE2Q96GT9 111 aa11.46□□□□□ -0.57
MSL3-202ENST00000337339 CHD2O14647 1828 aaKnown RBP11.46□□□□□ -0.57
MSL3-202ENST00000337339 LRRC37A3O60309 1634 aa11.46□□□□□ -0.57
MSL3-202ENST00000337339 CPLX1O14810 134 aa11.46□□□□□ -0.58
MSL3-202ENST00000337339 ZBTB22O15209 634 aa11.46□□□□□ -0.58
MSL3-202ENST00000337339 LETM1O95202 739 aaPredicted RBP11.46□□□□□ -0.58
MSL3-202ENST00000337339 HSP90AA2PQ14568 343 aaPredicted RBP11.46□□□□□ -0.58
MSL3-202ENST00000337339 SF3A1Q15459 793 aaKnown RBP11.46□□□□□ -0.58
MSL3-202ENST00000337339 RABL6Q3YEC7 729 aaPredicted RBP11.46□□□□□ -0.58
MSL3-202ENST00000337339 STOX1Q6ZVD7 989 aa11.46□□□□□ -0.58
MSL3-202ENST00000337339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.46□□□□□ -0.58
MSL3-202ENST00000337339 ADAMTS2O95450 1211 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 HSPD1P10809 573 aaKnown RBP11.45□□□□□ -0.58
MSL3-202ENST00000337339 MST1RQ04912 1400 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 SCRN1Q12765 414 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.45□□□□□ -0.58
MSL3-202ENST00000337339 RALYLQ86SE5 291 aaKnown RBP11.45□□□□□ -0.58
MSL3-202ENST00000337339 LUZP1Q86V48 1076 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 ERCC4Q92889 916 aaPredicted RBP11.45□□□□□ -0.58
MSL3-202ENST00000337339 ERVV-2B6SEH9 535 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 RNF113AO15541 343 aaKnown RBP11.45□□□□□ -0.58
MSL3-202ENST00000337339 POLR3DP05423 398 aaPredicted RBP11.45□□□□□ -0.58
MSL3-202ENST00000337339 ZAP70P43403 619 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 ME1P48163 572 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 SASS6Q6UVJ0 657 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 DHX32Q7L7V1 743 aaKnown RBP11.45□□□□□ -0.58
MSL3-202ENST00000337339 SCAND2PQ9GZW5 306 aaPredicted RBP11.45□□□□□ -0.58
MSL3-202ENST00000337339 PODXL2Q9NZ53 605 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 ZNF609O15014 1411 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 A0A087WWV3 80 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 SNAP23O00161 211 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 RXRAP19793 462 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 PIGBQ92521 554 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 GTF3C6Q969F1 213 aa11.45□□□□□ -0.58
MSL3-202ENST00000337339 TNS3Q68CZ2 1445 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 PTPDC1A2A3K4 754 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 TCIRG1Q13488 830 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 SCARF1Q14162 830 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 HLFQ16534 295 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 OSBP2Q969R2 916 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 ACSBG1Q96GR2 724 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 PDLIM2Q96JY6 352 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 COL15A1P39059 1388 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 E7EWF7 191 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 LEO1Q8WVC0 666 aaPredicted RBP11.44□□□□□ -0.58
MSL3-202ENST00000337339 TRIM5Q9C035 493 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 MED23Q9ULK4 1368 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 M0R2C6 588 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 CASP7P55210 303 aa11.44□□□□□ -0.58
MSL3-202ENST00000337339 NR1I2O75469 434 aa11.43□□□□□ -0.58
MSL3-202ENST00000337339 GNL2Q13823 731 aaKnown RBP11.43□□□□□ -0.58
MSL3-202ENST00000337339 ATP2B3Q16720 1220 aa11.43□□□□□ -0.58
MSL3-202ENST00000337339 ANO6Q4KMQ2 910 aa11.43□□□□□ -0.58
MSL3-202ENST00000337339 MAST3O60307 1309 aa11.43□□□□□ -0.58
MSL3-202ENST00000337339 MARF1Q9Y4F3 1742 aaKnown RBP11.43□□□□□ -0.58
MSL3-202ENST00000337339 CACNA1FO60840 1977 aa11.43□□□□□ -0.58
MSL3-202ENST00000337339 ITGA6P23229 1130 aa11.43□□□□□ -0.58
MSL3-202ENST00000337339 ZRSR1Q15695 479 aaKnown RBP11.43□□□□□ -0.58
MSL3-202ENST00000337339 IMMTQ16891 758 aaKnown RBP11.43□□□□□ -0.58
MSL3-202ENST00000337339 SLC9C2Q5TAH2 1124 aa11.43□□□□□ -0.58
MSL3-202ENST00000337339 GREM2Q9H772 168 aa11.43□□□□□ -0.58
MSL3-202ENST00000337339 GJB4Q9NTQ9 266 aa11.43□□□□□ -0.58
MSL3-202ENST00000337339 IQSEC3Q9UPP2 1182 aaPredicted RBP11.43□□□□□ -0.58
MSL3-202ENST00000337339 TRDNQ13061 729 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 RRP12Q5JTH9 1297 aaKnown RBP11.42□□□□□ -0.58
MSL3-202ENST00000337339 AKAP2Q9Y2D5 859 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 KIF3AQ9Y496 699 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
MSL3-202ENST00000337339 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
MSL3-202ENST00000337339 OFD1O75665 1012 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 TYRO3Q06418 890 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms