RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 TOB2Q14106 344 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-202ENST00000324554 USPL1Q5W0Q7 1092 aa19.11■□□□□ 0.65
USHBP1-202ENST00000324554 GIMAP6Q6P9H5 292 aa19.11■□□□□ 0.65
USHBP1-202ENST00000324554 NGLY1Q96IV0 654 aa19.11■□□□□ 0.65
USHBP1-202ENST00000324554 DBNDD2Q9BQY9 259 aa19.11■□□□□ 0.65
USHBP1-202ENST00000324554 FUCA2Q9BTY2 467 aa19.11■□□□□ 0.65
USHBP1-202ENST00000324554 DDB1Q16531 1140 aa19.11■□□□□ 0.65
USHBP1-202ENST00000324554 ZNF830Q96NB3 372 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-202ENST00000324554 RFX7Q2KHR2 1363 aa19.11■□□□□ 0.65
USHBP1-202ENST00000324554 ADCY5O95622 1261 aa19.1■□□□□ 0.65
USHBP1-202ENST00000324554 RBM10P98175 930 aaKnown RBP19.1■□□□□ 0.65
USHBP1-202ENST00000324554 UQCRHLA0A096LP55 91 aa19.1■□□□□ 0.65
USHBP1-202ENST00000324554 UQCRHP07919 91 aa19.1■□□□□ 0.65
USHBP1-202ENST00000324554 LARP1BQ659C4 914 aaKnown RBP19.1■□□□□ 0.65
USHBP1-202ENST00000324554 LMBR1LQ6UX01 489 aa19.1■□□□□ 0.65
USHBP1-202ENST00000324554 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
USHBP1-202ENST00000324554 DNAJC2Q99543 621 aaKnown RBP19.09■□□□□ 0.65
USHBP1-202ENST00000324554 HAUS7Q99871 368 aa19.09■□□□□ 0.65
USHBP1-202ENST00000324554 ZNF609O15014 1411 aa19.09■□□□□ 0.65
USHBP1-202ENST00000324554 CHGBP05060 677 aa19.09■□□□□ 0.65
USHBP1-202ENST00000324554 KIAA2012Q0VF49 1180 aa19.09■□□□□ 0.65
USHBP1-202ENST00000324554 CDC37L1Q7L3B6 337 aa19.09■□□□□ 0.65
USHBP1-202ENST00000324554 PDIA4P13667 645 aaKnown RBP19.08■□□□□ 0.64
USHBP1-202ENST00000324554 FOXO4P98177 505 aa19.08■□□□□ 0.64
USHBP1-202ENST00000324554 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
USHBP1-202ENST00000324554 SLC4A9Q96Q91 983 aa19.08■□□□□ 0.64
USHBP1-202ENST00000324554 H7C1W4 665 aa19.08■□□□□ 0.64
USHBP1-202ENST00000324554 MARCH10Q8NA82 808 aaPredicted RBP19.08■□□□□ 0.64
USHBP1-202ENST00000324554 PDCL3Q9H2J4 239 aa19.08■□□□□ 0.64
USHBP1-202ENST00000324554 KRT32Q14532 448 aa19.07■□□□□ 0.64
USHBP1-202ENST00000324554 SPATA31A5Q5VU36 1347 aa19.07■□□□□ 0.64
USHBP1-202ENST00000324554 SPATA31A7Q8IWB4 1347 aa19.07■□□□□ 0.64
USHBP1-202ENST00000324554 UBR2Q8IWV8 1755 aa19.06■□□□□ 0.64
USHBP1-202ENST00000324554 PDCP20941 246 aa19.06■□□□□ 0.64
USHBP1-202ENST00000324554 CCDC129Q6ZRS4 1044 aa19.06■□□□□ 0.64
USHBP1-202ENST00000324554 DDX46Q7L014 1031 aaKnown RBP19.06■□□□□ 0.64
USHBP1-202ENST00000324554 SEC62Q99442 399 aaKnown RBP19.06■□□□□ 0.64
USHBP1-202ENST00000324554 ITGB4P16144 1822 aa19.06■□□□□ 0.64
USHBP1-202ENST00000324554 KDM4AO75164 1064 aa19.06■□□□□ 0.64
USHBP1-202ENST00000324554 FAM173BQ6P4H8 233 aa19.06■□□□□ 0.64
USHBP1-202ENST00000324554 FERMT3Q86UX7 667 aa19.06■□□□□ 0.64
USHBP1-202ENST00000324554 TTC12Q9H892 705 aaPredicted RBP19.06■□□□□ 0.64
USHBP1-202ENST00000324554 TNS2Q63HR2 1409 aa19.06■□□□□ 0.64
USHBP1-202ENST00000324554 AP5Z1O43299 807 aa19.05■□□□□ 0.64
USHBP1-202ENST00000324554 MCMDC2Q4G0Z9 681 aa19.05■□□□□ 0.64
USHBP1-202ENST00000324554 GLIPR1L2Q4G1C9 344 aa19.05■□□□□ 0.64
USHBP1-202ENST00000324554 ATG9AQ7Z3C6 839 aa19.05■□□□□ 0.64
USHBP1-202ENST00000324554 TTC6Q86TZ1 520 aa19.05■□□□□ 0.64
USHBP1-202ENST00000324554 CHMP3Q9Y3E7 222 aa19.05■□□□□ 0.64
USHBP1-202ENST00000324554 NUP188Q5SRE5 1749 aa19.05■□□□□ 0.64
USHBP1-202ENST00000324554 NEK1Q96PY6 1258 aa19.05■□□□□ 0.64
USHBP1-202ENST00000324554 CWC25Q9NXE8 425 aaPredicted RBP19.05■□□□□ 0.64
USHBP1-202ENST00000324554 U3KPZ7 1027 aaPredicted RBP19.05■□□□□ 0.64
USHBP1-202ENST00000324554 KRT85P78386 507 aa19.04■□□□□ 0.64
USHBP1-202ENST00000324554 STK3Q13188 491 aa19.04■□□□□ 0.64
USHBP1-202ENST00000324554 SASS6Q6UVJ0 657 aa19.04■□□□□ 0.64
USHBP1-202ENST00000324554 KLHL34Q8N239 644 aa19.04■□□□□ 0.64
USHBP1-202ENST00000324554 KBTBD3Q8NAB2 608 aa19.04■□□□□ 0.64
USHBP1-202ENST00000324554 FAM13BQ9NYF5 915 aa19.04■□□□□ 0.64
USHBP1-202ENST00000324554 BCL9O00512 1426 aa19.04■□□□□ 0.64
USHBP1-202ENST00000324554 TJP1Q07157 1748 aa19.04■□□□□ 0.64
USHBP1-202ENST00000324554 CYP21A2P08686 494 aa19.04■□□□□ 0.64
USHBP1-202ENST00000324554 PAPPAQ13219 1627 aa19.03■□□□□ 0.64
USHBP1-202ENST00000324554 NRAPQ86VF7 1730 aa19.03■□□□□ 0.64
USHBP1-202ENST00000324554 SH3TC1Q8TE82 1336 aa19.03■□□□□ 0.64
USHBP1-202ENST00000324554 KCNQ2O43526 872 aa19.03■□□□□ 0.64
USHBP1-202ENST00000324554 C17orf53Q8N3J3 647 aaPredicted RBP19.03■□□□□ 0.64
USHBP1-202ENST00000324554 PIBF1Q8WXW3 757 aa19.03■□□□□ 0.64
USHBP1-202ENST00000324554 GTF3C6Q969F1 213 aa19.03■□□□□ 0.64
USHBP1-202ENST00000324554 PALLDQ8WX93 1383 aa19.02■□□□□ 0.64
USHBP1-202ENST00000324554 ELP1O95163 1332 aa19.02■□□□□ 0.64
USHBP1-202ENST00000324554 PLCB2Q00722 1185 aa19.02■□□□□ 0.64
USHBP1-202ENST00000324554 FAM182BQ5T319 152 aa19.02■□□□□ 0.64
USHBP1-202ENST00000324554 SLIT2O94813 1529 aa19.02■□□□□ 0.64
USHBP1-202ENST00000324554 NEUROD6Q96NK8 337 aa19.02■□□□□ 0.63
USHBP1-202ENST00000324554 GPR108Q9NPR9 543 aa19.02■□□□□ 0.63
USHBP1-202ENST00000324554 THRAP3Q9Y2W1 955 aaKnown RBP19.02■□□□□ 0.63
USHBP1-202ENST00000324554 Q6ZUG5 572 aa19.01■□□□□ 0.63
USHBP1-202ENST00000324554 GOLIM4O00461 696 aa19.01■□□□□ 0.63
USHBP1-202ENST00000324554 LIG1P18858 919 aa19.01■□□□□ 0.63
USHBP1-202ENST00000324554 IL15P40933 162 aaPredicted RBP19.01■□□□□ 0.63
USHBP1-202ENST00000324554 CERKQ8TCT0 537 aa19.01■□□□□ 0.63
USHBP1-202ENST00000324554 PAG1Q9NWQ8 432 aa19.01■□□□□ 0.63
USHBP1-202ENST00000324554 JAK2O60674 1132 aa19■□□□□ 0.63
USHBP1-202ENST00000324554 STARD3NLO95772 234 aa19■□□□□ 0.63
USHBP1-202ENST00000324554 TIMM10P62072 90 aa19■□□□□ 0.63
USHBP1-202ENST00000324554 NOLC1Q14978 699 aaKnown RBP eCLIP19■□□□□ 0.63
USHBP1-202ENST00000324554 CCDC191Q8NCU4 936 aa19■□□□□ 0.63
USHBP1-202ENST00000324554 DYNC1I1O14576 645 aa19■□□□□ 0.63
USHBP1-202ENST00000324554 CAMK4Q16566 473 aa18.99■□□□□ 0.63
USHBP1-202ENST00000324554 SLFNL1Q499Z3 407 aa18.99■□□□□ 0.63
USHBP1-202ENST00000324554 LRRC24Q50LG9 513 aa18.99■□□□□ 0.63
USHBP1-202ENST00000324554 STOX1Q6ZVD7 989 aa18.99■□□□□ 0.63
USHBP1-202ENST00000324554 CDCA7Q9BWT1 371 aaPredicted RBP18.99■□□□□ 0.63
USHBP1-202ENST00000324554 ZBTB1Q9Y2K1 713 aa18.99■□□□□ 0.63
USHBP1-202ENST00000324554 BCL9LQ86UU0 1499 aa18.99■□□□□ 0.63
USHBP1-202ENST00000324554 EYA2O00167 538 aa18.99■□□□□ 0.63
USHBP1-202ENST00000324554 CYP19A1P11511 503 aaPredicted RBP18.99■□□□□ 0.63
USHBP1-202ENST00000324554 HSPA1LP34931 641 aa18.99■□□□□ 0.63
USHBP1-202ENST00000324554 KCNQ4P56696 695 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms