RNA–Protein interactions for RNA: ENST00000323929.7

MRE11-201, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRE11, Length 6,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-201ENST00000323929 SETBP1Q9Y6X0 1596 aa8.73□□□□□ -1.01
MRE11-201ENST00000323929 TTLL12Q14166 644 aaPredicted RBP8.73□□□□□ -1.01
MRE11-201ENST00000323929 DESP17661 470 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 CCT2P78371 535 aaKnown RBP8.72□□□□□ -1.01
MRE11-201ENST00000323929 TSHZ3Q63HK5 1081 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 SMC5Q8IY18 1101 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 CALML4Q96GE6 196 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 ROBO2Q9HCK4 1378 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 ARID3AQ99856 593 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 ERBB4Q15303 1308 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 EIF4A1P60842 406 aaKnown RBP8.72□□□□□ -1.01
MRE11-201ENST00000323929 PUM3Q15397 648 aaKnown RBP8.72□□□□□ -1.01
MRE11-201ENST00000323929 ZFYVE27Q5T4F4 411 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 SLC9C2Q5TAH2 1124 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 IQCEQ6IPM2 695 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 CNBD1Q8NA66 436 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 ORC3Q9UBD5 711 aaPredicted RBP8.72□□□□□ -1.01
MRE11-201ENST00000323929 PA2G4Q9UQ80 394 aaKnown RBP8.72□□□□□ -1.01
MRE11-201ENST00000323929 USP19O94966 1318 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 CCDC171Q6TFL3 1326 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 ZBTB43O43298 467 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 FEZ1Q99689 392 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 SLC26A6Q9BXS9 759 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 USP21Q9UK80 565 aa8.72□□□□□ -1.01
MRE11-201ENST00000323929 FKBP15Q5T1M5 1219 aa8.71□□□□□ -1.01
MRE11-201ENST00000323929 PDCL3Q9H2J4 239 aa8.71□□□□□ -1.01
MRE11-201ENST00000323929 KLF18A0A0U1RQI7 1052 aa8.71□□□□□ -1.01
MRE11-201ENST00000323929 PHKG2P15735 406 aa8.71□□□□□ -1.01
MRE11-201ENST00000323929 HAND2P61296 217 aa8.71□□□□□ -1.01
MRE11-201ENST00000323929 SPC24Q8NBT2 197 aa8.71□□□□□ -1.01
MRE11-201ENST00000323929 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.019e-7■■■■□ 23.2
MRE11-201ENST00000323929 MAST3O60307 1309 aa8.71□□□□□ -1.01
MRE11-201ENST00000323929 ALKQ9UM73 1620 aa8.71□□□□□ -1.01
MRE11-201ENST00000323929 EYA2O00167 538 aa8.71□□□□□ -1.01
MRE11-201ENST00000323929 RTN1Q16799 776 aa8.71□□□□□ -1.01
MRE11-201ENST00000323929 TNPO1Q92973 898 aaKnown RBP8.71□□□□□ -1.01
MRE11-201ENST00000323929 MROH5Q6ZUA9 1318 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 CEP152O94986 1710 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 SSFA2P28290 1259 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 KRT24Q2M2I5 525 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 STXBP4Q6ZWJ1 553 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 MTERF4Q7Z6M4 381 aaKnown RBP8.71□□□□□ -1.02
MRE11-201ENST00000323929 MADDQ8WXG6 1647 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 POTEJP0CG39 1038 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 FERMT3Q86UX7 667 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 TCP11L1Q9NUJ3 509 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 RBM28Q9NW13 759 aaKnown RBP8.71□□□□□ -1.02
MRE11-201ENST00000323929 ZSCAN22P10073 491 aaPredicted RBP8.71□□□□□ -1.02
MRE11-201ENST00000323929 RLBP1P12271 317 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 SETQ01105 290 aaPredicted RBP8.71□□□□□ -1.02
MRE11-201ENST00000323929 STX1AQ16623 288 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 PLEKHM2Q8IWE5 1019 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 LGR6Q9HBX8 967 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 SH3TC1Q8TE82 1336 aa8.71□□□□□ -1.02
MRE11-201ENST00000323929 LDHBP07195 334 aaKnown RBP8.7□□□□□ -1.02
MRE11-201ENST00000323929 ITGA6P23229 1130 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 TNNI3KQ59H18 835 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 CNNM3Q8NE01 707 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 FPGT-TNNI3KV9GXZ4 949 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 INO80Q9ULG1 1556 aaPredicted RBP8.7□□□□□ -1.02
MRE11-201ENST00000323929 ERLIN2O94905 339 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 FAM114A1Q8IWE2 563 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 OGFOD1Q8N543 542 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 MAGEB6Q8N7X4 407 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 TMX3Q96JJ7 454 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 SUPT20HQ8NEM7 779 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.7□□□□□ -1.023e-7■■■■■ 46.6
MRE11-201ENST00000323929 EIF5P55010 431 aaKnown RBP8.7□□□□□ -1.02
MRE11-201ENST00000323929 HSP90B2PQ58FF3 399 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 Q6ZUG5 572 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 MICU3Q86XE3 530 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 FSIP1Q8NA03 581 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 RMND1Q9NWS8 449 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 SYCE3A1L190 88 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 RBM25P49756 843 aaKnown RBP8.7□□□□□ -1.02
MRE11-201ENST00000323929 GUCY1B3Q02153 619 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 CAMK4Q16566 473 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 TTLL5Q6EMB2 1281 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 G2E3Q7L622 706 aa8.7□□□□□ -1.02
MRE11-201ENST00000323929 HSP90AA2PQ14568 343 aaPredicted RBP8.69□□□□□ -1.02
MRE11-201ENST00000323929 CAVIN2O95810 425 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 ERMNQ8TAM6 284 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 NAP1L4Q99733 375 aaKnown RBP8.69□□□□□ -1.02
MRE11-201ENST00000323929 ZC3H12CQ9C0D7 883 aaKnown RBP8.69□□□□□ -1.02
MRE11-201ENST00000323929 PRC1O43663 620 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 UBE2HP62256 183 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 QRICH2Q9H0J4 1663 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 NOM1Q5C9Z4 860 aaKnown RBP8.69□□□□□ -1.02
MRE11-201ENST00000323929 SKAP1Q86WV1 359 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 BRF1Q92994 677 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 E9PCH4 1651 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 ABCC4O15439 1325 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 CCDC181Q5TID7 509 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 CREB3L3Q68CJ9 461 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 TNNQ9UQP3 1299 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 RIMBP3CA6NJZ7 1639 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 RIMBP3BA6NNM3 1639 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 RIMBP3Q9UFD9 1639 aa8.69□□□□□ -1.02
MRE11-201ENST00000323929 CHMLP26374 656 aa8.68□□□□□ -1.02
MRE11-201ENST00000323929 FAM98CQ17RN3 349 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms