RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 BRWD1Q9NSI6 2320 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 HDGFL2Q7Z4V5 671 aaPredicted RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 TMX3Q96JJ7 454 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 FOXN1O15353 648 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 IPO8O15397 1037 aaKnown RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 TAL1P17542 331 aaPredicted RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 GORABQ5T7V8 394 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 HELBQ8NG08 1087 aaPredicted RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 MYL10Q9BUA6 226 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 ATP6V1DQ9Y5K8 247 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 GPR101Q96P66 508 aaPredicted RBP4.26□□□□□ -1.73
GEN1-201ENST00000317402 ABCA6Q8N139 1617 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 ACACAQ13085 2346 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 ADAMTS2O95450 1211 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 CSB-PGBD3P0DP91 1061 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 FKBP5Q13451 457 aaPredicted RBP4.26□□□□□ -1.73
GEN1-201ENST00000317402 CCDC144BQ3MJ40 725 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 COG3Q96JB2 828 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 DOCK3Q8IZD9 2030 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 AK7Q96M32 723 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 PRDM4Q9UKN5 801 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 PTPRZ1P23471 2315 aaPredicted RBP4.26□□□□□ -1.73
GEN1-201ENST00000317402 IQSEC2Q5JU85 1478 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 BICDL1Q6ZP65 573 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 CAGE1Q8TC20 777 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 PUS3Q9BZE2 481 aaKnown RBP4.26□□□□□ -1.73
GEN1-201ENST00000317402 CHPF2Q9P2E5 772 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 HAND2P61296 217 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 CCDC82Q8N4S0 544 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 MYCBPQ99417 103 aaPredicted RBP4.26□□□□□ -1.73
GEN1-201ENST00000317402 KMT2EQ8IZD2 1858 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 HOXC8P31273 242 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 TAF7Q15545 349 aaPredicted RBP4.26□□□□□ -1.73
GEN1-201ENST00000317402 FAM135BQ49AJ0 1406 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 PRPF40BQ6NWY9 871 aaKnown RBP4.26□□□□□ -1.73
GEN1-201ENST00000317402 SPIRE2Q8WWL2 714 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 DIAPH3Q9NSV4 1193 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 EVC2Q86UK5 1308 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 ECM2O94769 699 aaPredicted RBP4.26□□□□□ -1.73
GEN1-201ENST00000317402 GPTP24298 496 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 CCT2P78371 535 aaKnown RBP4.26□□□□□ -1.73
GEN1-201ENST00000317402 ZNF646O15015 1829 aaPredicted RBP4.26□□□□□ -1.73
GEN1-201ENST00000317402 KCNA4P22459 653 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 LRCH2Q5VUJ6 765 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 PDCL2Q8N4E4 241 aa4.26□□□□□ -1.73
GEN1-201ENST00000317402 QRICH2Q9H0J4 1663 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 EEF2KMTQ96G04 330 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 BOLA2Q9H3K6 86 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 WASLO00401 505 aaPredicted RBP4.25□□□□□ -1.73
GEN1-201ENST00000317402 NASPP49321 788 aaPredicted RBP4.25□□□□□ -1.73
GEN1-201ENST00000317402 CDC37L1Q7L3B6 337 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 BIN1O00499 593 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 CCDC173Q0VFZ6 552 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 SRCIN1Q9C0H9 1055 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 SEC31BQ9NQW1 1179 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 TPM3P06753 285 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 CCDC91Q7Z6B0 441 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 CNKSR2Q8WXI2 1034 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 RPAP1Q9BWH6 1393 aaPredicted RBP4.25□□□□□ -1.73
GEN1-201ENST00000317402 SZT2Q5T011 3432 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 CTR9Q6PD62 1173 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 CCDC191Q8NCU4 936 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 CCDC94Q9BW85 323 aaPredicted RBP4.25□□□□□ -1.73
GEN1-201ENST00000317402 ZBTB3Q9H5J0 574 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 ARGLU1Q9NWB6 273 aaPredicted RBP4.25□□□□□ -1.73
GEN1-201ENST00000317402 NCKAP5O14513 1909 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.25□□□□□ -1.737e-14■■■■■ 51.9
GEN1-201ENST00000317402 ABCC11Q96J66 1382 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 RAB3GAP1Q15042 981 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 RUFY3Q7L099 469 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 PREX1Q8TCU6 1659 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 PTPRUQ92729 1446 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 K7ELQ4 463 aaPredicted RBP4.25□□□□□ -1.73
GEN1-201ENST00000317402 SEC31AO94979 1220 aaKnown RBP4.25□□□□□ -1.73
GEN1-201ENST00000317402 PTGS1P23219 599 aa4.25□□□□□ -1.73
GEN1-201ENST00000317402 HOOK1Q9UJC3 728 aaKnown RBP4.25□□□□□ -1.73
GEN1-201ENST00000317402 FANCGO15287 622 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 PSME1Q06323 249 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 TDRD15B5MCY1 1934 aaKnown RBP4.24□□□□□ -1.73
GEN1-201ENST00000317402 IBSPP21815 317 aaPredicted RBP4.24□□□□□ -1.73
GEN1-201ENST00000317402 GRAMD1CQ8IYS0 662 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 MYD88Q99836 296 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 ANAPC15P60006 121 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 TTC22Q5TAA0 569 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 CCDC97Q96F63 343 aaPredicted RBP4.24□□□□□ -1.73
GEN1-201ENST00000317402 GOLPH3LQ9H4A5 285 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 CCP110O43303 1012 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 AK2P54819 239 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 SLC52A1Q9NWF4 448 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 CPSF2Q9P2I0 782 aaKnown RBP4.24□□□□□ -1.73
GEN1-201ENST00000317402 SNX14Q9Y5W7 946 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 ARHGEF28Q8N1W1 1705 aaKnown RBP4.24□□□□□ -1.73
GEN1-201ENST00000317402 KIF20AO95235 890 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 ZNF219Q9P2Y4 722 aaPredicted RBP4.24□□□□□ -1.73
GEN1-201ENST00000317402 PES1O00541 588 aaKnown RBP4.24□□□□□ -1.73
GEN1-201ENST00000317402 VGFO15240 615 aaPredicted RBP4.24□□□□□ -1.73
GEN1-201ENST00000317402 FAM177A1Q8N128 213 aaPredicted RBP4.24□□□□□ -1.73
GEN1-201ENST00000317402 PCDH10Q9P2E7 1040 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 PKDREJQ9NTG1 2253 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 N4BP2Q86UW6 1770 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms