RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 FBLN1P23142 703 aa5.3□□□□□ -1.56
POLR2B-201ENST00000314595 RBM10P98175 930 aaKnown RBP5.3□□□□□ -1.56
POLR2B-201ENST00000314595 LAS1LQ9Y4W2 734 aaKnown RBP5.3□□□□□ -1.56
POLR2B-201ENST00000314595 POTEFA5A3E0 1075 aa5.3□□□□□ -1.56
POLR2B-201ENST00000314595 PPEF1O14829 653 aaPredicted RBP5.3□□□□□ -1.56
POLR2B-201ENST00000314595 TRPA1O75762 1119 aa5.3□□□□□ -1.56
POLR2B-201ENST00000314595 BBOX1O75936 387 aa5.3□□□□□ -1.56
POLR2B-201ENST00000314595 ZNF157P51786 506 aaPredicted RBP5.3□□□□□ -1.56
POLR2B-201ENST00000314595 NKX2-3Q8TAU0 364 aa5.3□□□□□ -1.56
POLR2B-201ENST00000314595 TRPM4Q8TD43 1214 aa5.3□□□□□ -1.56
POLR2B-201ENST00000314595 MRS2Q9HD23 443 aa5.3□□□□□ -1.56
POLR2B-201ENST00000314595 MANSC4A6NHS7 340 aaPredicted RBP5.3□□□□□ -1.56
POLR2B-201ENST00000314595 ZBTB7BO15156 539 aaPredicted RBP5.3□□□□□ -1.56
POLR2B-201ENST00000314595 PTCD1O75127 700 aaKnown RBP5.3□□□□□ -1.56
POLR2B-201ENST00000314595 HSP90AA2PQ14568 343 aaPredicted RBP5.3□□□□□ -1.56
POLR2B-201ENST00000314595 ARHGEF6Q15052 776 aa5.3□□□□□ -1.56
POLR2B-201ENST00000314595 RALBP1Q15311 655 aa5.3□□□□□ -1.56
POLR2B-201ENST00000314595 AGBL3Q8NEM8 1001 aa5.3□□□□□ -1.56
POLR2B-201ENST00000314595 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.3□□□□□ -1.56
POLR2B-201ENST00000314595 H7C1D1 291 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 VIL1P09327 827 aaKnown RBP5.29□□□□□ -1.56
POLR2B-201ENST00000314595 ZNF790Q6PG37 636 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 NBPF5PQ86XG9 351 aaPredicted RBP5.29□□□□□ -1.56
POLR2B-201ENST00000314595 LARGE2Q8N3Y3 721 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 CFAP44Q96MT7 982 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 COL25A1Q9BXS0 654 aaPredicted RBP5.29□□□□□ -1.56
POLR2B-201ENST00000314595 HS1BP3Q53T59 392 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 CDCA5Q96FF9 252 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 FMNL2Q96PY5 1086 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 RCAN3Q9UKA8 241 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 HDAC9Q9UKV0 1011 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 PPP2R3BQ9Y5P8 575 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 LTBP2Q14767 1821 aa5.29□□□□□ -1.56
POLR2B-201ENST00000314595 DZIP3Q86Y13 1208 aaKnown RBP5.28□□□□□ -1.56
POLR2B-201ENST00000314595 RBM27Q9P2N5 1060 aaKnown RBP5.28□□□□□ -1.56
POLR2B-201ENST00000314595 H0YGN5 161 aa5.28□□□□□ -1.56
POLR2B-201ENST00000314595 HTATSF1O43719 755 aaKnown RBP5.28□□□□□ -1.56
POLR2B-201ENST00000314595 DMTNQ08495 405 aa5.28□□□□□ -1.56
POLR2B-201ENST00000314595 PAXIP1Q6ZW49 1069 aaPredicted RBP5.28□□□□□ -1.56
POLR2B-201ENST00000314595 ZNF34Q8IZ26 560 aa5.28□□□□□ -1.56
POLR2B-201ENST00000314595 GMLQ99445 158 aa5.28□□□□□ -1.56
POLR2B-201ENST00000314595 CNOT7Q9UIV1 285 aaKnown RBP5.28□□□□□ -1.56
POLR2B-201ENST00000314595 ZNF500O60304 480 aaPredicted RBP5.28□□□□□ -1.56
POLR2B-201ENST00000314595 OFD1O75665 1012 aa5.28□□□□□ -1.56
POLR2B-201ENST00000314595 USP48Q86UV5 1035 aa5.28□□□□□ -1.56
POLR2B-201ENST00000314595 PARP10Q53GL7 1025 aa5.27□□□□□ -1.57
POLR2B-201ENST00000314595 DCPSQ96C86 337 aaKnown RBP5.27□□□□□ -1.57
POLR2B-201ENST00000314595 ZBED3Q96IU2 234 aaPredicted RBP5.27□□□□□ -1.57
POLR2B-201ENST00000314595 PDLIM2Q96JY6 352 aa5.27□□□□□ -1.57
POLR2B-201ENST00000314595 RTL9Q8NET4 1388 aa5.27□□□□□ -1.57
POLR2B-201ENST00000314595 YDJCA8MPS7 323 aa5.27□□□□□ -1.57
POLR2B-201ENST00000314595 NTSR2O95665 410 aa5.27□□□□□ -1.57
POLR2B-201ENST00000314595 GTF2F1P35269 517 aaKnown RBP eCLIP5.27□□□□□ -1.57
POLR2B-201ENST00000314595 AMER1Q5JTC6 1135 aaPredicted RBP5.27□□□□□ -1.57
POLR2B-201ENST00000314595 KRT26Q7Z3Y9 468 aa5.27□□□□□ -1.57
POLR2B-201ENST00000314595 SYMPKQ92797 1274 aaKnown RBP5.27□□□□□ -1.57
POLR2B-201ENST00000314595 SHISA4Q96DD7 197 aa5.27□□□□□ -1.57
POLR2B-201ENST00000314595 HTATIP2Q9BUP3 242 aa5.27□□□□□ -1.57
POLR2B-201ENST00000314595 HSP90AA1P07900 732 aaKnown RBP5.27□□□□□ -1.57
POLR2B-201ENST00000314595 CHRM1P11229 460 aaPredicted RBP5.27□□□□□ -1.57
POLR2B-201ENST00000314595 IFNL1Q8IU54 200 aa5.27□□□□□ -1.57
POLR2B-201ENST00000314595 PPIP5K2O43314 1243 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 ZSCAN20P17040 1043 aaPredicted RBP5.26□□□□□ -1.57
POLR2B-201ENST00000314595 SLC20A2Q08357 652 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 NCBP3Q53F19 620 aaKnown RBP5.26□□□□□ -1.57
POLR2B-201ENST00000314595 MICALL2Q8IY33 904 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 TBC1D32Q96NH3 1257 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 MAP7D2Q96T17 732 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 GJA3Q9Y6H8 435 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 TMEM265A0A087WTH1 108 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 SPRYD7Q5W111 196 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 NBPF11Q86T75 865 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 ZBTB12Q9Y330 459 aaPredicted RBP5.26□□□□□ -1.57
POLR2B-201ENST00000314595 FRMPD3Q5JV73 1810 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 MAP3K15Q6ZN16 1313 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 GTF2E1P29083 439 aaPredicted RBP5.26□□□□□ -1.57
POLR2B-201ENST00000314595 MRE11P49959 708 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 DUSP27Q5VZP5 1158 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 MTMR14Q8NCE2 650 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 GDF15Q99988 308 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 MTMR10Q9NXD2 777 aa5.26□□□□□ -1.57
POLR2B-201ENST00000314595 SAMD7Q7Z3H4 446 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 ANKLE1Q8NAG6 615 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 LGR6Q9HBX8 967 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 ABCC4O15439 1325 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 DLG5Q8TDM6 1919 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 GJA8P48165 433 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 AOC3Q16853 763 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 KIF4BQ2VIQ3 1234 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 TTC5Q8N0Z6 440 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 MYH15Q9Y2K3 1946 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 MYO3BQ8WXR4 1341 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 EN2P19622 333 aaPredicted RBP5.25□□□□□ -1.57
POLR2B-201ENST00000314595 GAS2L2Q8NHY3 880 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 RPGRQ92834 1020 aaKnown RBP5.25□□□□□ -1.57
POLR2B-201ENST00000314595 TMEM106CQ9BVX2 250 aa5.25□□□□□ -1.57
POLR2B-201ENST00000314595 ESPNB1AK53 854 aa5.24□□□□□ -1.57
POLR2B-201ENST00000314595 SNRPA1P09661 255 aaKnown RBP5.24□□□□□ -1.57
POLR2B-201ENST00000314595 CANXP27824 592 aaKnown RBP5.24□□□□□ -1.57
POLR2B-201ENST00000314595 GRAPQ13588 217 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms