RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 KRT222Q8N1A0 295 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 XAGE3Q8WTP9 111 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 PDIA4P13667 645 aaKnown RBP15.62■□□□□ 0.09
SCAF4-201ENST00000286835 NCBP1Q09161 790 aaKnown RBP15.62■□□□□ 0.09
SCAF4-201ENST00000286835 TFCP2Q12800 502 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 C11orf57Q6ZUT1 292 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-201ENST00000286835 UBXN4Q92575 508 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 A0A087WZG4 1122 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 LINS1Q8NG48 757 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 MAP4K1Q92918 833 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 GTF3C6Q969F1 213 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 ZSCAN16Q9H4T2 348 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-201ENST00000286835 HMG20BQ9P0W2 317 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-201ENST00000286835 IGSF1Q8N6C5 1336 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 CCDC144BQ3MJ40 725 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 CCDC144CPQ8IYA2 1237 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 ARGLU1Q9NWB6 273 aaPredicted RBP15.61■□□□□ 0.09
SCAF4-201ENST00000286835 IFNKQ9P0W0 207 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 SETD1BQ9UPS6 1966 aaKnown RBP15.61■□□□□ 0.09
SCAF4-201ENST00000286835 CHGBP05060 677 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 TNNT3P45378 269 aaPredicted RBP15.61■□□□□ 0.09
SCAF4-201ENST00000286835 FEZ1Q99689 392 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 TCHHQ07283 1943 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 CCDC66A2RUB6 948 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 HSP90AB3PQ58FF7 597 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 NFXL1Q6ZNB6 911 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 EPB41L2O43491 1005 aaKnown RBP15.61■□□□□ 0.09
SCAF4-201ENST00000286835 ALDH1L1O75891 902 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 C8orf76Q96K31 380 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 DNAI1Q9UI46 699 aa15.61■□□□□ 0.09
SCAF4-201ENST00000286835 REREQ9P2R6 1566 aa15.6■□□□□ 0.09
SCAF4-201ENST00000286835 CTAGE5O15320 804 aa15.6■□□□□ 0.09
SCAF4-201ENST00000286835 MARCKSP29966 332 aaPredicted RBP15.6■□□□□ 0.09
SCAF4-201ENST00000286835 DBNDD2Q9BQY9 259 aa15.6■□□□□ 0.09
SCAF4-201ENST00000286835 ARHGAP31Q2M1Z3 1444 aa15.6■□□□□ 0.09
SCAF4-201ENST00000286835 IFT172Q9UG01 1749 aa15.6■□□□□ 0.09
SCAF4-201ENST00000286835 SLC3A2P08195 630 aaKnown RBP15.6■□□□□ 0.09
SCAF4-201ENST00000286835 TRDNQ13061 729 aa15.6■□□□□ 0.09
SCAF4-201ENST00000286835 COL9A3Q14050 684 aaPredicted RBP15.6■□□□□ 0.09
SCAF4-201ENST00000286835 PGBD1Q96JS3 809 aa15.6■□□□□ 0.09
SCAF4-201ENST00000286835 USP27XA6NNY8 438 aa15.59■□□□□ 0.09
SCAF4-201ENST00000286835 SLU7O95391 586 aaKnown RBP15.59■□□□□ 0.09
SCAF4-201ENST00000286835 SLFNL1Q499Z3 407 aa15.59■□□□□ 0.09
SCAF4-201ENST00000286835 LRRC8AQ8IWT6 810 aa15.59■□□□□ 0.09
SCAF4-201ENST00000286835 NGLY1Q96IV0 654 aa15.59■□□□□ 0.09
SCAF4-201ENST00000286835 USP28Q96RU2 1077 aa15.59■□□□□ 0.09
SCAF4-201ENST00000286835 USP6P35125 1406 aa15.59■□□□□ 0.09
SCAF4-201ENST00000286835 SASH1O94885 1247 aa15.59■□□□□ 0.09
SCAF4-201ENST00000286835 PTPN21Q16825 1174 aa15.59■□□□□ 0.09
SCAF4-201ENST00000286835 MCMDC2Q4G0Z9 681 aa15.59■□□□□ 0.09
SCAF4-201ENST00000286835 ZSWIM4Q9H7M6 989 aa15.59■□□□□ 0.09
SCAF4-201ENST00000286835 NEMFO60524 1076 aa15.58■□□□□ 0.09
SCAF4-201ENST00000286835 KIF20AO95235 890 aa15.58■□□□□ 0.09
SCAF4-201ENST00000286835 GTF2F1P35269 517 aaKnown RBP eCLIP15.58■□□□□ 0.09
SCAF4-201ENST00000286835 TEX35Q5T0J7 233 aa15.58■□□□□ 0.09
SCAF4-201ENST00000286835 OLFM4Q6UX06 510 aa15.58■□□□□ 0.08
SCAF4-201ENST00000286835 ZNF397Q8NF99 534 aaPredicted RBP15.58■□□□□ 0.08
SCAF4-201ENST00000286835 FRMPD1Q5SYB0 1578 aa15.58■□□□□ 0.08
SCAF4-201ENST00000286835 TIMM10P62072 90 aa15.58■□□□□ 0.08
SCAF4-201ENST00000286835 TRIM29Q14134 588 aa15.58■□□□□ 0.08
SCAF4-201ENST00000286835 MRPS27Q92552 414 aaKnown RBP15.58■□□□□ 0.08
SCAF4-201ENST00000286835 A2ML1A8K2U0 1454 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 UBAP1LF5GYI3 381 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 PLEKHG1Q9ULL1 1385 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 GOLGA8BA8MQT2 603 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.57■□□□□ 0.08
SCAF4-201ENST00000286835 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 FUCA2Q9BTY2 467 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 IFIT1P09914 478 aaKnown RBP15.57■□□□□ 0.08
SCAF4-201ENST00000286835 ERCC6LQ2NKX8 1250 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 CCDC82Q8N4S0 544 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 ORC3Q9UBD5 711 aaPredicted RBP15.57■□□□□ 0.08
SCAF4-201ENST00000286835 TOB2Q14106 344 aaPredicted RBP15.57■□□□□ 0.08
SCAF4-201ENST00000286835 ARHGAP29Q52LW3 1261 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 AKAP4Q5JQC9 854 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 CPLX2Q6PUV4 134 aaKnown RBP15.57■□□□□ 0.08
SCAF4-201ENST00000286835 TMCO3Q6UWJ1 677 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 LMBR1LQ6UX01 489 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 TDRD7Q8NHU6 1098 aaKnown RBP15.57■□□□□ 0.08
SCAF4-201ENST00000286835 IP6K1Q92551 441 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 ZFP91Q96JP5 570 aaPredicted RBP15.57■□□□□ 0.08
SCAF4-201ENST00000286835 TMOD3Q9NYL9 352 aa15.57■□□□□ 0.08
SCAF4-201ENST00000286835 PES1O00541 588 aaKnown RBP15.56■□□□□ 0.08
SCAF4-201ENST00000286835 CAVIN2O95810 425 aa15.56■□□□□ 0.08
SCAF4-201ENST00000286835 SKIDA1Q1XH10 827 aa15.56■□□□□ 0.08
SCAF4-201ENST00000286835 GSDMDP57764 484 aa15.56■□□□□ 0.08
SCAF4-201ENST00000286835 SCRN1Q12765 414 aa15.56■□□□□ 0.08
SCAF4-201ENST00000286835 ANKRD13DQ6ZTN6 518 aa15.56■□□□□ 0.08
SCAF4-201ENST00000286835 KNDC1Q76NI1 1749 aa15.56■□□□□ 0.08
SCAF4-201ENST00000286835 TAF5LO75529 589 aa15.56■□□□□ 0.08
SCAF4-201ENST00000286835 RNMTO43148 476 aaKnown RBP15.55■□□□□ 0.08
SCAF4-201ENST00000286835 FAM160A1Q05DH4 1040 aa15.55■□□□□ 0.08
SCAF4-201ENST00000286835 SIRT1Q96EB6 747 aa15.55■□□□□ 0.08
SCAF4-201ENST00000286835 NOL10Q9BSC4 688 aaKnown RBP15.55■□□□□ 0.08
SCAF4-201ENST00000286835 RXRAP19793 462 aa15.55■□□□□ 0.08
SCAF4-201ENST00000286835 UTP14CQ5TAP6 766 aaKnown RBP15.55■□□□□ 0.08
SCAF4-201ENST00000286835 DHX32Q7L7V1 743 aaKnown RBP15.55■□□□□ 0.08
SCAF4-201ENST00000286835 CYP21A2P08686 494 aa15.55■□□□□ 0.08
SCAF4-201ENST00000286835 ST3GAL1Q11201 340 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 231.9 ms