RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 TPTE2Q6XPS3 522 aa16.94■□□□□ 0.3
CCDC6-201ENST00000263102 MIGA1Q8NAN2 632 aa16.94■□□□□ 0.3
CCDC6-201ENST00000263102 NOP56O00567 594 aaKnown RBP16.94■□□□□ 0.3
CCDC6-201ENST00000263102 NBPF7P0C2Y1 421 aaPredicted RBP16.94■□□□□ 0.3
CCDC6-201ENST00000263102 ASIC1P78348 528 aa16.94■□□□□ 0.3
CCDC6-201ENST00000263102 TSHZ3Q63HK5 1081 aa16.94■□□□□ 0.3
CCDC6-201ENST00000263102 EVI5LQ96CN4 794 aa16.94■□□□□ 0.3
CCDC6-201ENST00000263102 CTR9Q6PD62 1173 aa16.94■□□□□ 0.3
CCDC6-201ENST00000263102 BBXQ8WY36 941 aaPredicted RBP16.94■□□□□ 0.3
CCDC6-201ENST00000263102 MCM9Q9NXL9 1143 aa16.94■□□□□ 0.3
CCDC6-201ENST00000263102 POLR3GO15318 223 aaPredicted RBP16.93■□□□□ 0.3
CCDC6-201ENST00000263102 IFI16Q16666 785 aaKnown RBP16.93■□□□□ 0.3
CCDC6-201ENST00000263102 AKR1B10O60218 316 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 KRT5P13647 590 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 GJB2P29033 226 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 FAM47CQ5HY64 1035 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 GRPEL1Q9HAV7 217 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
CCDC6-201ENST00000263102 GOLGA1Q92805 767 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 SRRTQ9BXP5 876 aaKnown RBP16.93■□□□□ 0.3
CCDC6-201ENST00000263102 ZSWIM4Q9H7M6 989 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 LMTK3Q96Q04 1460 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 KCNA4P22459 653 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 PPP1R21Q6ZMI0 780 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 PLVAPQ9BX97 442 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 LRRC2Q9BYS8 371 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 CLSTN2Q9H4D0 955 aa16.93■□□□□ 0.3
CCDC6-201ENST00000263102 KRT9P35527 623 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 CCDC155Q8N6L0 562 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 CEP112Q8N8E3 955 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 MSANTD4Q8NCY6 345 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 HELBQ8NG08 1087 aaPredicted RBP16.92■□□□□ 0.3
CCDC6-201ENST00000263102 KRT23Q9C075 422 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 KIF22Q14807 665 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 ESR2Q92731 530 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 SCAND2PQ9GZW5 306 aaPredicted RBP16.92■□□□□ 0.3
CCDC6-201ENST00000263102 ANAPC4Q9UJX5 808 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 KLF18A0A0U1RQI7 1052 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 M0QZ92 97 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 MYCLP12524 364 aaPredicted RBP16.92■□□□□ 0.3
CCDC6-201ENST00000263102 PPP2R5DQ14738 602 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 KIFC2Q96AC6 838 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 NCOA2Q15596 1464 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 CUL4BQ13620 913 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 PLIN2Q99541 437 aa16.92■□□□□ 0.3
CCDC6-201ENST00000263102 SH2B1Q9NRF2 756 aaPredicted RBP16.92■□□□□ 0.3
CCDC6-201ENST00000263102 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
CCDC6-201ENST00000263102 N4BP3O15049 544 aa16.91■□□□□ 0.3
CCDC6-201ENST00000263102 DAPK3O43293 454 aa16.91■□□□□ 0.3
CCDC6-201ENST00000263102 CHST3Q7LGC8 479 aa16.91■□□□□ 0.3
CCDC6-201ENST00000263102 FAM200AQ8TCP9 573 aa16.91■□□□□ 0.3
CCDC6-201ENST00000263102 BIRC3Q13489 604 aa16.91■□□□□ 0.3
CCDC6-201ENST00000263102 RTN1Q16799 776 aa16.91■□□□□ 0.3
CCDC6-201ENST00000263102 PTPDC1A2A3K4 754 aa16.91■□□□□ 0.3
CCDC6-201ENST00000263102 CEP135Q66GS9 1140 aa16.91■□□□□ 0.3
CCDC6-201ENST00000263102 SPECC1LQ69YQ0 1117 aa16.91■□□□□ 0.3
CCDC6-201ENST00000263102 FLIIQ13045 1269 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 RNF169Q8NCN4 708 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 ATAD2BQ9ULI0 1458 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 SLC8A3P57103 927 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 ZBTB16Q05516 673 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 ANKRD13DQ6ZTN6 518 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 EPRSP07814 1512 aaKnown RBP16.9■□□□□ 0.3
CCDC6-201ENST00000263102 MYCP01106 439 aaPredicted RBP16.9■□□□□ 0.3
CCDC6-201ENST00000263102 CCDC14Q49A88 953 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 NEK1Q96PY6 1258 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 RMND1Q9NWS8 449 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 CGNQ9P2M7 1197 aaKnown RBP16.9■□□□□ 0.3
CCDC6-201ENST00000263102 SMIM23A6NLE4 172 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 PTGS1P23219 599 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 PYM1Q9BRP8 204 aaKnown RBP16.9■□□□□ 0.3
CCDC6-201ENST00000263102 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 DDX39AO00148 427 aaKnown RBP16.9■□□□□ 0.3
CCDC6-201ENST00000263102 CKAP4Q07065 602 aaKnown RBP16.9■□□□□ 0.3
CCDC6-201ENST00000263102 CCDC6Q16204 474 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
CCDC6-201ENST00000263102 CCDC114Q96M63 670 aa16.89■□□□□ 0.29
CCDC6-201ENST00000263102 RASAL2Q9UJF2 1139 aa16.89■□□□□ 0.29
CCDC6-201ENST00000263102 CCDC160A6NGH7 325 aa16.89■□□□□ 0.29
CCDC6-201ENST00000263102 CCDC169A6NNP5 214 aa16.89■□□□□ 0.29
CCDC6-201ENST00000263102 HSPA2P54652 639 aa16.89■□□□□ 0.29
CCDC6-201ENST00000263102 CCDC183Q5T5S1 534 aa16.89■□□□□ 0.29
CCDC6-201ENST00000263102 LARGE2Q8N3Y3 721 aa16.89■□□□□ 0.29
CCDC6-201ENST00000263102 GPCPD1Q9NPB8 672 aa16.89■□□□□ 0.29
CCDC6-201ENST00000263102 ZBTB43O43298 467 aa16.89■□□□□ 0.29
CCDC6-201ENST00000263102 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.29
CCDC6-201ENST00000263102 ZFP91Q96JP5 570 aaPredicted RBP16.89■□□□□ 0.29
CCDC6-201ENST00000263102 CFAP157Q5JU67 520 aa16.88■□□□□ 0.29
CCDC6-201ENST00000263102 SMCR8Q8TEV9 937 aaPredicted RBP16.88■□□□□ 0.29
CCDC6-201ENST00000263102 WASLO00401 505 aaPredicted RBP16.88■□□□□ 0.29
CCDC6-201ENST00000263102 MCM5P33992 734 aa16.88■□□□□ 0.29
CCDC6-201ENST00000263102 XAGE3Q8WTP9 111 aa16.88■□□□□ 0.29
CCDC6-201ENST00000263102 DDX12PQ92771 950 aa16.88■□□□□ 0.29
CCDC6-201ENST00000263102 ABL1P00519 1130 aa16.88■□□□□ 0.29
CCDC6-201ENST00000263102 IRX5P78411 483 aaPredicted RBP16.88■□□□□ 0.29
CCDC6-201ENST00000263102 MICALCLQ6ZW33 695 aa16.88■□□□□ 0.29
CCDC6-201ENST00000263102 UFL1O94874 794 aa16.88■□□□□ 0.29
CCDC6-201ENST00000263102 FCHSD1Q86WN1 690 aa16.88■□□□□ 0.29
CCDC6-201ENST00000263102 GSDMBQ8TAX9 411 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms