RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 MAP7D2Q96T17 732 aa11.42□□□□□ -0.58
CSTF1-201ENST00000217109 TM6SF1Q9BZW5 370 aa11.42□□□□□ -0.58
CSTF1-201ENST00000217109 PTPDC1A2A3K4 754 aa11.42□□□□□ -0.58
CSTF1-201ENST00000217109 EPHA10Q5JZY3 1008 aa11.42□□□□□ -0.58
CSTF1-201ENST00000217109 MAP4K1Q92918 833 aa11.42□□□□□ -0.58
CSTF1-201ENST00000217109 LIG1P18858 919 aa11.41□□□□□ -0.58
CSTF1-201ENST00000217109 SART3Q15020 963 aaKnown RBP11.41□□□□□ -0.58
CSTF1-201ENST00000217109 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
CSTF1-201ENST00000217109 PTPRUQ92729 1446 aa11.41□□□□□ -0.58
CSTF1-201ENST00000217109 EPB41L2O43491 1005 aaKnown RBP11.41□□□□□ -0.58
CSTF1-201ENST00000217109 IGKV5-2P06315 115 aa11.41□□□□□ -0.58
CSTF1-201ENST00000217109 OTUD7BQ6GQQ9 843 aa11.41□□□□□ -0.58
CSTF1-201ENST00000217109 ZSCAN16Q9H4T2 348 aaPredicted RBP11.41□□□□□ -0.58
CSTF1-201ENST00000217109 LRP2BPQ9P2M1 347 aa11.41□□□□□ -0.58
CSTF1-201ENST00000217109 CCDC69A6NI79 296 aa11.41□□□□□ -0.58
CSTF1-201ENST00000217109 ZSCAN25Q6NSZ9 544 aa11.41□□□□□ -0.58
CSTF1-201ENST00000217109 CLEC17AQ6ZS10 378 aa11.41□□□□□ -0.58
CSTF1-201ENST00000217109 TTC6Q86TZ1 520 aa11.41□□□□□ -0.58
CSTF1-201ENST00000217109 MYO5BQ9ULV0 1848 aa11.41□□□□□ -0.58
CSTF1-201ENST00000217109 SERPINC1P01008 464 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 PRKCSHP14314 528 aaPredicted RBP11.4□□□□□ -0.58
CSTF1-201ENST00000217109 PTGS1P23219 599 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 OLFM4Q6UX06 510 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 ANKRD18BA2A2Z9 1011 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 ATP5JP18859 108 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 RXRAP19793 462 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 ATP2B3Q16720 1220 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 KBTBD3Q8NAB2 608 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 ERBB3P21860 1342 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 SLFNL1Q499Z3 407 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 SLC9C2Q5TAH2 1124 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 CCDC112Q8NEF3 446 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 PIBF1Q8WXW3 757 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 ANO10Q9NW15 660 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 NCOA3Q9Y6Q9 1424 aa11.4□□□□□ -0.58
CSTF1-201ENST00000217109 EYA2O00167 538 aa11.4□□□□□ -0.59
CSTF1-201ENST00000217109 RNF113AO15541 343 aaKnown RBP11.4□□□□□ -0.59
CSTF1-201ENST00000217109 BICDL1Q6ZP65 573 aa11.4□□□□□ -0.59
CSTF1-201ENST00000217109 LEO1Q8WVC0 666 aaPredicted RBP11.4□□□□□ -0.59
CSTF1-201ENST00000217109 ERCC4Q92889 916 aaPredicted RBP11.4□□□□□ -0.59
CSTF1-201ENST00000217109 NAPBQ9H115 298 aa11.4□□□□□ -0.59
CSTF1-201ENST00000217109 ADCY9O60503 1353 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 MINDY4BA8MYZ0 360 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 TAF5LO75529 589 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 FAM177A1Q8N128 213 aaPredicted RBP11.39□□□□□ -0.59
CSTF1-201ENST00000217109 JMYQ8N9B5 988 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 IQSEC3Q9UPP2 1182 aaPredicted RBP11.39□□□□□ -0.59
CSTF1-201ENST00000217109 IFT172Q9UG01 1749 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 NECTIN1Q15223 517 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 LRRC24Q50LG9 513 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 PDCL3Q9H2J4 239 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 NUTM2BA6NNL0 878 aaPredicted RBP11.39□□□□□ -0.59
CSTF1-201ENST00000217109 NUTM2EB1AL46 878 aaPredicted RBP11.39□□□□□ -0.59
CSTF1-201ENST00000217109 PRC1O43663 620 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 IL2RBP14784 551 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 MARCKSP29966 332 aaPredicted RBP11.39□□□□□ -0.59
CSTF1-201ENST00000217109 TTLL5Q6EMB2 1281 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 MTERF4Q7Z6M4 381 aaKnown RBP11.39□□□□□ -0.59
CSTF1-201ENST00000217109 NUTM2AQ8IVF1 878 aaPredicted RBP11.39□□□□□ -0.59
CSTF1-201ENST00000217109 TRIM22Q8IYM9 498 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 NCOA7Q8NI08 942 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 NACAP1Q9BZK3 213 aa11.39□□□□□ -0.59
CSTF1-201ENST00000217109 HOOK1Q9UJC3 728 aaKnown RBP11.38□□□□□ -0.59
CSTF1-201ENST00000217109 CEP170BQ9Y4F5 1589 aaPredicted RBP11.38□□□□□ -0.59
CSTF1-201ENST00000217109 TSC1Q92574 1164 aa11.38□□□□□ -0.59
CSTF1-201ENST00000217109 RAI14Q9P0K7 980 aa11.38□□□□□ -0.59
CSTF1-201ENST00000217109 AK9Q5TCS8 1911 aa11.38□□□□□ -0.59
CSTF1-201ENST00000217109 IFIT3O14879 490 aaKnown RBP11.38□□□□□ -0.59
CSTF1-201ENST00000217109 TNNT1P13805 278 aa11.38□□□□□ -0.59
CSTF1-201ENST00000217109 TECPR2O15040 1411 aa11.38□□□□□ -0.59
CSTF1-201ENST00000217109 CHGBP05060 677 aa11.38□□□□□ -0.59
CSTF1-201ENST00000217109 PTPN12Q05209 780 aaKnown RBP11.38□□□□□ -0.59
CSTF1-201ENST00000217109 COPRSQ9NQ92 184 aa11.38□□□□□ -0.59
CSTF1-201ENST00000217109 AGLP35573 1532 aa11.37□□□□□ -0.59
CSTF1-201ENST00000217109 CDKL5O76039 1030 aa11.37□□□□□ -0.59
CSTF1-201ENST00000217109 ADAMTS2O95450 1211 aa11.37□□□□□ -0.59
CSTF1-201ENST00000217109 CYP21A2P08686 494 aa11.37□□□□□ -0.59
CSTF1-201ENST00000217109 PUS3Q9BZE2 481 aaKnown RBP11.37□□□□□ -0.59
CSTF1-201ENST00000217109 A0A1B0GVL5 298 aa11.37□□□□□ -0.59
CSTF1-201ENST00000217109 SLC3A2P08195 630 aaKnown RBP11.37□□□□□ -0.59
CSTF1-201ENST00000217109 STX1AQ16623 288 aa11.37□□□□□ -0.59
CSTF1-201ENST00000217109 TTC14Q96N46 770 aa11.37□□□□□ -0.59
CSTF1-201ENST00000217109 UBAC1Q9BSL1 405 aa11.37□□□□□ -0.59
CSTF1-201ENST00000217109 PRDM10Q9NQV6 1147 aa11.37□□□□□ -0.59
CSTF1-201ENST00000217109 CTAGE5O15320 804 aa11.37□□□□□ -0.59
CSTF1-201ENST00000217109 METAP2P50579 478 aaKnown RBP eCLIP11.37□□□□□ -0.59
CSTF1-201ENST00000217109 NR1I2O75469 434 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 MTX1Q13505 466 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 CFAP100Q494V2 611 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 HSP90AA4PQ58FG1 418 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 DNAJC10Q8IXB1 793 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 XAGE2Q96GT9 111 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 GOLGA8AA7E2F4 631 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 MAP3K12Q12852 859 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 TMEM67Q5HYA8 995 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 GTF3C6Q969F1 213 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 CBX8Q9HC52 389 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 DYNC1I1O14576 645 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 CYP27B1O15528 508 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 AOPEPQ8N6M6 819 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms