RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 RBSNQ9H1K0 784 aa6.25□□□□□ -1.41
CDKN3-201ENST00000216414 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.25□□□□□ -1.41
CDKN3-201ENST00000216414 EGFRP00533 1210 aa6.24□□□□□ -1.41
CDKN3-201ENST00000216414 IL22RA1Q8N6P7 574 aa6.24□□□□□ -1.41
CDKN3-201ENST00000216414 LRFN2Q9ULH4 789 aa6.24□□□□□ -1.41
CDKN3-201ENST00000216414 F8W735 103 aaPredicted RBP6.23□□□□□ -1.41
CDKN3-201ENST00000216414 MMP20O60882 483 aa6.23□□□□□ -1.41
CDKN3-201ENST00000216414 CD97P48960 835 aa6.23□□□□□ -1.41
CDKN3-201ENST00000216414 DZIP1LQ8IYY4 767 aaKnown RBP6.23□□□□□ -1.41
CDKN3-201ENST00000216414 FAM200AQ8TCP9 573 aa6.23□□□□□ -1.41
CDKN3-201ENST00000216414 GLB1P16278 677 aa6.22□□□□□ -1.41
CDKN3-201ENST00000216414 AGGF1Q8N302 714 aaeCLIP6.22□□□□□ -1.41
CDKN3-201ENST00000216414 TRIM33Q9UPN9 1127 aa6.22□□□□□ -1.41
CDKN3-201ENST00000216414 KCNMB2Q9Y691 235 aa6.22□□□□□ -1.41
CDKN3-201ENST00000216414 GSC2O15499 205 aa6.21□□□□□ -1.42
CDKN3-201ENST00000216414 GP2P55259 537 aaKnown RBP6.21□□□□□ -1.42
CDKN3-201ENST00000216414 FKBP5Q13451 457 aaPredicted RBP6.21□□□□□ -1.42
CDKN3-201ENST00000216414 SETDB1Q15047 1291 aa6.21□□□□□ -1.42
CDKN3-201ENST00000216414 CDCA8Q53HL2 280 aa6.21□□□□□ -1.42
CDKN3-201ENST00000216414 COX20Q5RI15 118 aa6.21□□□□□ -1.42
CDKN3-201ENST00000216414 TMEM130Q8N3G9 435 aa6.21□□□□□ -1.42
CDKN3-201ENST00000216414 DCAF11Q8TEB1 546 aa6.21□□□□□ -1.42
CDKN3-201ENST00000216414 SRA1Q9HD15 236 aaKnown RBP6.21□□□□□ -1.42
CDKN3-201ENST00000216414 OAS3Q9Y6K5 1087 aaKnown RBP6.21□□□□□ -1.42
CDKN3-201ENST00000216414 RFX1P22670 979 aa6.2□□□□□ -1.42
CDKN3-201ENST00000216414 SOX18P35713 384 aa6.2□□□□□ -1.42
CDKN3-201ENST00000216414 MAP4K3Q8IVH8 894 aa6.2□□□□□ -1.42
CDKN3-201ENST00000216414 PRIMPOLQ96LW4 560 aa6.19□□□□□ -1.42
CDKN3-201ENST00000216414 NOVA2Q9UNW9 492 aaKnown RBP6.19□□□□□ -1.42
CDKN3-201ENST00000216414 RAXQ9Y2V3 346 aa6.19□□□□□ -1.42
CDKN3-201ENST00000216414 PPME1Q9Y570 386 aa6.19□□□□□ -1.42
CDKN3-201ENST00000216414 PRMT3O60678 531 aa6.18□□□□□ -1.42
CDKN3-201ENST00000216414 NLRP13Q86W25 1043 aa6.18□□□□□ -1.42
CDKN3-201ENST00000216414 ETFBKMTQ8IXQ9 262 aa6.18□□□□□ -1.42
CDKN3-201ENST00000216414 MUC3BQ9H195 1237 aa6.18□□□□□ -1.42
CDKN3-201ENST00000216414 LINC01387J3KSC0 135 aa6.17□□□□□ -1.42
CDKN3-201ENST00000216414 IGLV1-40P01703 118 aa6.17□□□□□ -1.42
CDKN3-201ENST00000216414 HOXD8P13378 290 aaPredicted RBP6.17□□□□□ -1.42
CDKN3-201ENST00000216414 BRD2P25440 801 aaKnown RBP6.17□□□□□ -1.42
CDKN3-201ENST00000216414 CDC25BP30305 580 aa6.17□□□□□ -1.42
CDKN3-201ENST00000216414 GRIK1P39086 918 aa6.17□□□□□ -1.42
CDKN3-201ENST00000216414 TRIP4Q15650 581 aaPredicted RBP6.17□□□□□ -1.42
CDKN3-201ENST00000216414 CFAP70Q5T0N1 1121 aa6.17□□□□□ -1.42
CDKN3-201ENST00000216414 TXNDC11Q6PKC3 985 aa6.17□□□□□ -1.42
CDKN3-201ENST00000216414 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.17□□□□□ -1.42
CDKN3-201ENST00000216414 CACTIN-AS1Q8N1I8 211 aa6.17□□□□□ -1.42
CDKN3-201ENST00000216414 LACRTQ9GZZ8 138 aa6.17□□□□□ -1.42
CDKN3-201ENST00000216414 STOML1Q9UBI4 398 aa6.17□□□□□ -1.42
CDKN3-201ENST00000216414 A6NJR5 290 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 KIAA1324LA8MWY0 1029 aaPredicted RBP6.16□□□□□ -1.42
CDKN3-201ENST00000216414 UBAP1LF5GYI3 381 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 TGFB1P01137 390 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 ATP11AP98196 1134 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 CEP135Q66GS9 1140 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 C16orf46Q6P387 395 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 Q6ZS46 218 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 ACAD11Q709F0 780 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 GALNT11Q8NCW6 608 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 SPACA7Q96KW9 195 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 UBL7Q96S82 380 aaPredicted RBP6.16□□□□□ -1.42
CDKN3-201ENST00000216414 SAP130Q9H0E3 1048 aa6.16□□□□□ -1.42
CDKN3-201ENST00000216414 DHX15O43143 795 aaKnown RBP6.15□□□□□ -1.42
CDKN3-201ENST00000216414 SMNDC1O75940 238 aaKnown RBP eCLIP6.15□□□□□ -1.42
CDKN3-201ENST00000216414 WISP1O95388 367 aa6.15□□□□□ -1.42
CDKN3-201ENST00000216414 MED26O95402 600 aa6.15□□□□□ -1.42
CDKN3-201ENST00000216414 HYAL2Q12891 473 aa6.15□□□□□ -1.42
CDKN3-201ENST00000216414 SWI5Q1ZZU3 235 aa6.15□□□□□ -1.42
CDKN3-201ENST00000216414 COL13A1Q5TAT6 717 aaPredicted RBP6.15□□□□□ -1.42
CDKN3-201ENST00000216414 INTS5Q6P9B9 1019 aaKnown RBP6.15□□□□□ -1.42
CDKN3-201ENST00000216414 OR13H1Q8NG92 308 aa6.15□□□□□ -1.42
CDKN3-201ENST00000216414 PIK3R5Q8WYR1 880 aa6.15□□□□□ -1.42
CDKN3-201ENST00000216414 MKNK1Q9BUB5 465 aa6.15□□□□□ -1.42
CDKN3-201ENST00000216414 CARD10Q9BWT7 1032 aa6.15□□□□□ -1.42
CDKN3-201ENST00000216414 CDC27P30260 824 aa6.14□□□□□ -1.43
CDKN3-201ENST00000216414 CD68P34810 354 aaPredicted RBP6.14□□□□□ -1.43
CDKN3-201ENST00000216414 SCNN1AP37088 669 aa6.14□□□□□ -1.43
CDKN3-201ENST00000216414 FAM26DQ5JW98 314 aa6.14□□□□□ -1.43
CDKN3-201ENST00000216414 TTC39BQ5VTQ0 682 aaPredicted RBP6.14□□□□□ -1.43
CDKN3-201ENST00000216414 CEP41Q9BYV8 373 aa6.14□□□□□ -1.43
CDKN3-201ENST00000216414 FAM13BQ9NYF5 915 aa6.14□□□□□ -1.43
CDKN3-201ENST00000216414 ZNF777Q9ULD5 760 aaPredicted RBP6.14□□□□□ -1.43
CDKN3-201ENST00000216414 ACIN1Q9UKV3 1341 aaKnown RBP6.14□□□□□ -1.43
CDKN3-201ENST00000216414 NAA30Q147X3 362 aaPredicted RBP6.13□□□□□ -1.43
CDKN3-201ENST00000216414 FAM117BQ6P1L5 589 aa6.13□□□□□ -1.43
CDKN3-201ENST00000216414 ARMC10Q8N2F6 343 aa6.13□□□□□ -1.43
CDKN3-201ENST00000216414 UTP4Q969X6 686 aaKnown RBP6.13□□□□□ -1.43
CDKN3-201ENST00000216414 RASSF4Q9H2L5 321 aa6.13□□□□□ -1.43
CDKN3-201ENST00000216414 KCNK4Q9NYG8 393 aa6.13□□□□□ -1.43
CDKN3-201ENST00000216414 FNDC3AQ9Y2H6 1198 aaKnown RBP6.13□□□□□ -1.43
CDKN3-201ENST00000216414 FAM177BA6PVY3 158 aa6.12□□□□□ -1.43
CDKN3-201ENST00000216414 ZAP70P43403 619 aa6.12□□□□□ -1.43
CDKN3-201ENST00000216414 OCLNQ16625 522 aa6.12□□□□□ -1.43
CDKN3-201ENST00000216414 DUOXA2Q1HG44 320 aa6.12□□□□□ -1.43
CDKN3-201ENST00000216414 ZMIZ1Q9ULJ6 1067 aa6.12□□□□□ -1.43
CDKN3-201ENST00000216414 TNFRSF10BO14763 440 aa6.11□□□□□ -1.43
CDKN3-201ENST00000216414 FSCN2O14926 492 aa6.11□□□□□ -1.43
CDKN3-201ENST00000216414 WNT11O96014 354 aa6.11□□□□□ -1.43
CDKN3-201ENST00000216414 NFIAQ12857 509 aa6.11□□□□□ -1.43
CDKN3-201ENST00000216414 UVSSAQ2YD98 709 aa6.11□□□□□ -1.43
CDKN3-201ENST00000216414 CAPN12Q6ZSI9 719 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms