RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 ABCA5Q8WWZ7 1642 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 ERLIN2O94905 339 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 HIBADHP31937 336 aaKnown RBP12.79□□□□□ -0.36
RGPD5-201ENST00000016946 MAGEB6Q8N7X4 407 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
RGPD5-201ENST00000016946 JAG2Q9Y219 1238 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 B4DLN1 442 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 EPB41L2O43491 1005 aaKnown RBP12.79□□□□□ -0.36
RGPD5-201ENST00000016946 MRPL12P52815 198 aaKnown RBP12.79□□□□□ -0.36
RGPD5-201ENST00000016946 TMEM87AQ8NBN3 555 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 RBM25P49756 843 aaKnown RBP12.79□□□□□ -0.36
RGPD5-201ENST00000016946 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 TCEANC2Q96MN5 208 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 DNMT1P26358 1616 aaKnown RBP12.79□□□□□ -0.36
RGPD5-201ENST00000016946 LRRC2Q9BYS8 371 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 LRRC27Q9C0I9 530 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 CTAGE5O15320 804 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 CALM1P0DP23 149 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 CALM2P0DP24 149 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 CALM3P0DP25 149 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 CETN1Q12798 172 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 G2E3Q7L622 706 aa12.79□□□□□ -0.36
RGPD5-201ENST00000016946 BMP15O95972 392 aa12.78□□□□□ -0.36
RGPD5-201ENST00000016946 LARGE2Q8N3Y3 721 aa12.78□□□□□ -0.36
RGPD5-201ENST00000016946 NPHP4O75161 1426 aaPredicted RBP12.78□□□□□ -0.36
RGPD5-201ENST00000016946 DPP8Q6V1X1 898 aaPredicted RBP12.78□□□□□ -0.36
RGPD5-201ENST00000016946 VPS36Q86VN1 386 aa12.78□□□□□ -0.36
RGPD5-201ENST00000016946 CCDC150Q8NCX0 1101 aa12.78□□□□□ -0.36
RGPD5-201ENST00000016946 TFIP11Q9UBB9 837 aaKnown RBP12.78□□□□□ -0.36
RGPD5-201ENST00000016946 TRPC5Q9UL62 973 aaPredicted RBP12.78□□□□□ -0.36
RGPD5-201ENST00000016946 SSR1P43307 286 aaKnown RBP12.78□□□□□ -0.36
RGPD5-201ENST00000016946 CACNA2D4Q7Z3S7 1137 aa12.78□□□□□ -0.36
RGPD5-201ENST00000016946 PRC1O43663 620 aa12.78□□□□□ -0.36
RGPD5-201ENST00000016946 HEATR3Q7Z4Q2 680 aa12.78□□□□□ -0.36
RGPD5-201ENST00000016946 MPNDQ8N594 471 aa12.78□□□□□ -0.36
RGPD5-201ENST00000016946 SYCE3A1L190 88 aa12.77□□□□□ -0.36
RGPD5-201ENST00000016946 CETN2P41208 172 aa12.77□□□□□ -0.36
RGPD5-201ENST00000016946 ARHGAP29Q52LW3 1261 aa12.77□□□□□ -0.36
RGPD5-201ENST00000016946 PANK2Q9BZ23 570 aa12.77□□□□□ -0.36
RGPD5-201ENST00000016946 DDX19AQ9NUU7 478 aaKnown RBP12.77□□□□□ -0.36
RGPD5-201ENST00000016946 ANAPC15P60006 121 aa12.77□□□□□ -0.36
RGPD5-201ENST00000016946 FLAD1Q8NFF5 587 aa12.77□□□□□ -0.36
RGPD5-201ENST00000016946 TAF4BQ92750 862 aa12.77□□□□□ -0.36
RGPD5-201ENST00000016946 TBC1D2Q9BYX2 928 aa12.77□□□□□ -0.36
RGPD5-201ENST00000016946 TBCAO75347 108 aaKnown RBP12.77□□□□□ -0.37
RGPD5-201ENST00000016946 NAPAP54920 295 aa12.77□□□□□ -0.37
RGPD5-201ENST00000016946 PUM3Q15397 648 aaKnown RBP12.77□□□□□ -0.37
RGPD5-201ENST00000016946 PLEKHG1Q9ULL1 1385 aa12.77□□□□□ -0.37
RGPD5-201ENST00000016946 TEX11Q8IYF3 940 aa12.77□□□□□ -0.37
RGPD5-201ENST00000016946 SUPT20HQ8NEM7 779 aa12.77□□□□□ -0.37
RGPD5-201ENST00000016946 ALG1Q9BT22 464 aa12.77□□□□□ -0.37
RGPD5-201ENST00000016946 EIF6P56537 245 aaKnown RBP12.77□□□□□ -0.37
RGPD5-201ENST00000016946 SH2D4AQ9H788 454 aa12.77□□□□□ -0.37
RGPD5-201ENST00000016946 MAST3O60307 1309 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 CCDC183Q5T5S1 534 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 GRPEL1Q9HAV7 217 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 C6orf50Q9HD87 102 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 TNNQ9UQP3 1299 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 A0A1B0GUL7 405 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 SSFA2P28290 1259 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 PDE6BP35913 854 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 RAD50Q92878 1312 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 CKAP2LQ8IYA6 745 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 FAM177A1Q8N128 213 aaPredicted RBP12.76□□□□□ -0.37
RGPD5-201ENST00000016946 ZBTB40Q9NUA8 1239 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
RGPD5-201ENST00000016946 ZSCAN16Q9H4T2 348 aaPredicted RBP12.76□□□□□ -0.37
RGPD5-201ENST00000016946 TCERG1LQ5VWI1 586 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 KIAA1328Q86T90 577 aa12.76□□□□□ -0.37
RGPD5-201ENST00000016946 MAGI2Q86UL8 1455 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 RTL9Q8NET4 1388 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 CCDC102BQ68D86 513 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 RLBP1P12271 317 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 SFPQP23246 707 aaKnown RBP eCLIP12.75□□□□□ -0.37
RGPD5-201ENST00000016946 PLS1Q14651 629 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 SPA17Q15506 151 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 CCDC40Q4G0X9 1142 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 MBD4O95243 580 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 KANK3Q6NY19 840 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 NECAB1Q8N987 351 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 TIMM10P62072 90 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 QTRT2Q9H974 415 aaKnown RBP12.75□□□□□ -0.37
RGPD5-201ENST00000016946 SYCP3Q8IZU3 236 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 SBNO2Q9Y2G9 1366 aa12.75□□□□□ -0.37
RGPD5-201ENST00000016946 PHKG2P15735 406 aa12.74□□□□□ -0.37
RGPD5-201ENST00000016946 VTI1AQ96AJ9 217 aa12.74□□□□□ -0.37
RGPD5-201ENST00000016946 PTPRTO14522 1441 aa12.74□□□□□ -0.37
RGPD5-201ENST00000016946 Q6ZUG5 572 aa12.74□□□□□ -0.37
RGPD5-201ENST00000016946 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
RGPD5-201ENST00000016946 TMX3Q96JJ7 454 aa12.74□□□□□ -0.37
RGPD5-201ENST00000016946 EIF4A1P60842 406 aaKnown RBP12.74□□□□□ -0.37
RGPD5-201ENST00000016946 SPDYE3A6NKU9 549 aa12.74□□□□□ -0.37
RGPD5-201ENST00000016946 SETQ01105 290 aaPredicted RBP12.74□□□□□ -0.37
RGPD5-201ENST00000016946 JAKMIP3Q5VZ66 844 aa12.74□□□□□ -0.37
RGPD5-201ENST00000016946 CCDC24Q8N4L8 307 aa12.74□□□□□ -0.37
RGPD5-201ENST00000016946 USP19O94966 1318 aa12.74□□□□□ -0.37
RGPD5-201ENST00000016946 MTIF2P46199 727 aaKnown RBP12.74□□□□□ -0.37
RGPD5-201ENST00000016946 GCKRQ14397 625 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms