RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 TnrQ8BYI9 1358 aa14.16□□□□□ -0.14
Herc4-208ENSMUST00000219577 Arid5bQ8BM75 1188 aaKnown RBP14.16□□□□□ -0.14
Herc4-208ENSMUST00000219577 CerkQ8K4Q7 531 aa14.16□□□□□ -0.14
Herc4-208ENSMUST00000219577 Rbm42Q91V81 474 aaKnown RBP14.16□□□□□ -0.14
Herc4-208ENSMUST00000219577 Tnni2P13412 182 aa14.15□□□□□ -0.14
Herc4-208ENSMUST00000219577 Rec8Q8C5S7 591 aa14.15□□□□□ -0.14
Herc4-208ENSMUST00000219577 Tmx1Q8VBT0 278 aa14.15□□□□□ -0.14
Herc4-208ENSMUST00000219577 Hmg20bQ9Z104 317 aa14.15□□□□□ -0.14
Herc4-208ENSMUST00000219577 Pram1Q6BCL1 675 aa14.15□□□□□ -0.14
Herc4-208ENSMUST00000219577 Cep55Q8BT07 462 aa14.15□□□□□ -0.14
Herc4-208ENSMUST00000219577 Card10P58660 1021 aa14.15□□□□□ -0.14
Herc4-208ENSMUST00000219577 Nlrp9bQ66X22 1003 aa14.15□□□□□ -0.14
Herc4-208ENSMUST00000219577 Flt4P35917 1363 aa14.15□□□□□ -0.15
Herc4-208ENSMUST00000219577 Hspd1P63038 573 aaKnown RBP14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Pdcl2Q78Y63 240 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Ubxn10Q8BG34 277 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Zfp317Q8C0Q5 607 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Gys2Q8VCB3 704 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Ubxn4Q8VCH8 506 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Nop14Q8R3N1 860 aaKnown RBP14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Bicdl1A0JNT9 577 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Gm29094F6Q785 221 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Eya2O08575 532 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Usp28Q5I043 1051 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Zkscan8Q8BSL0 588 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Mb21d2Q8C525 428 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Fam213aQ9CYH2 218 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 MthfsQ9D110 203 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Hmgn5Q9JL35 406 aa14.14□□□□□ -0.15
Herc4-208ENSMUST00000219577 Cyp7a1Q64505 503 aa14.13□□□□□ -0.15
Herc4-208ENSMUST00000219577 Zbtb40Q6PCS8 1258 aa14.13□□□□□ -0.15
Herc4-208ENSMUST00000219577 Acnat2Q8BGG9 420 aa14.13□□□□□ -0.15
Herc4-208ENSMUST00000219577 SdsQ8VBT2 327 aa14.13□□□□□ -0.15
Herc4-208ENSMUST00000219577 Slit3Q9WVB4 1523 aa14.13□□□□□ -0.15
Herc4-208ENSMUST00000219577 1700113H08RikE9Q9Q5 327 aa14.13□□□□□ -0.15
Herc4-208ENSMUST00000219577 Prpf4bQ61136 1007 aaKnown RBP14.13□□□□□ -0.15
Herc4-208ENSMUST00000219577 Rad17Q6NXW6 688 aa14.13□□□□□ -0.15
Herc4-208ENSMUST00000219577 Tbc1d8Q9Z1A9 1134 aa14.13□□□□□ -0.15
Herc4-208ENSMUST00000219577 Zscan29E9Q5B4 869 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Lins1Q3U1D0 764 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Cnot6lQ8VEG6 555 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Terf2ipQ91VL8 393 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Ubr1O70481 1757 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Plekhd1B2RPU2 505 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Pla2g4fQ50L41 855 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Kcna6Q61923 529 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Sp8Q8BMJ8 486 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Dnm1P39053 867 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Abcc12Q80WJ6 1366 aa14.12□□□□□ -0.15
Herc4-208ENSMUST00000219577 Dnajc25A2ALW5 357 aa14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 Ltb4r2Q9JJL9 360 aa14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 Cyp2d10P24456 504 aa14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 LyarQ08288 388 aaKnown RBP14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 Atp2b3Q0VF55 1220 aa14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 Znf653Q6YND2 615 aa14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 Rbm19Q8R3C6 952 aaKnown RBP14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 Add3Q9QYB5 706 aaKnown RBP14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 Ccdc112A0AUP1 442 aa14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 Nxf2Q4ZGD8 691 aa14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 Hps3Q91VB4 1002 aa14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 SrrtQ99MR6 875 aaKnown RBP14.11□□□□□ -0.15
Herc4-208ENSMUST00000219577 Acap3Q6NXL5 833 aa14.1□□□□□ -0.15
Herc4-208ENSMUST00000219577 Odf2lQ9D478 642 aa14.1□□□□□ -0.15
Herc4-208ENSMUST00000219577 Ccne2Q9Z238 404 aa14.1□□□□□ -0.15
Herc4-208ENSMUST00000219577 Pik3c2aQ61194 1686 aa14.1□□□□□ -0.15
Herc4-208ENSMUST00000219577 Drc7Q6V3W6 876 aa14.1□□□□□ -0.15
Herc4-208ENSMUST00000219577 Ces1hD3Z298 562 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Atp2b1G5E829 1220 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Kif3aP28741 701 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 NfkbibQ60778 359 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Slu7Q8BHJ9 585 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Tnnt2P50752 301 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Sass6Q80UK7 654 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Csrnp1P59054 583 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Ehd2Q8BH64 543 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Rbm28Q8CGC6 750 aaKnown RBP14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Tmc2Q8R4P4 888 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Luzp1Q8R4U7 1068 aaKnown RBP14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Popdc2Q9ES82 367 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 A0A0U1RNP2 1173 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Hoxa7P02830 229 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Cdkn1cP49919 348 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Ppp4r3aQ6P2K6 820 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Nlrp3Q8R4B8 1033 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Adam1bQ8R534 806 aa14.09□□□□□ -0.15
Herc4-208ENSMUST00000219577 Aox1O54754 1333 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Kcnf1Q7TSH7 493 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Slfnl1Q8BHW9 410 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Col16a1Q8BLX7 1580 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Emilin1Q99K41 1017 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Sept12Q9D451 317 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Clic4Q9QYB1 253 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Map2P20357 1828 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Dctn1O08788 1281 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Gpr182P43142 395 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Nucb2P81117 420 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Cplx2P84086 134 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Cfap157Q0VFX2 523 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Atg9aQ68FE2 551 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Gnl3lQ6PGG6 577 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms