RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Ccdc89Q9DA73 370 aa8.65□□□□□ -1.02
Pcdh9-204ENSMUST00000193901 Dpf1Q9QX66 387 aa8.65□□□□□ -1.02
Pcdh9-204ENSMUST00000193901 Esx1O88933 382 aa8.65□□□□□ -1.02
Pcdh9-204ENSMUST00000193901 Chmp6P0C0A3 200 aa8.65□□□□□ -1.02
Pcdh9-204ENSMUST00000193901 Patl1Q3TC46 770 aaKnown RBP8.65□□□□□ -1.02
Pcdh9-204ENSMUST00000193901 Zranb3Q6NZP1 1069 aa8.65□□□□□ -1.02
Pcdh9-204ENSMUST00000193901 Ccdc40Q8BI79 1192 aa8.65□□□□□ -1.02
Pcdh9-204ENSMUST00000193901 Ces1aE9PYP1 563 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Casp8O89110 480 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Nectin2P32507 530 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 LyarQ08288 388 aaKnown RBP8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Spg7Q3ULF4 781 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mtmr3Q8K296 1196 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Tmem132aQ922P8 1018 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Bbs5Q9CZQ9 341 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mink1Q9JM52 1308 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Fam186bD3Z420 943 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 TrdnE9Q9K5 693 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ccdc113Q8C5T8 377 aa8.65□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Plekhh2Q8C115 1491 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Tnni2P13412 182 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Usp5P56399 858 aaKnown RBP8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ccdc157Q5SPX1 718 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mctp2Q5RJH2 878 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 WrnO09053 1401 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Dclk3Q8BWQ5 790 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Adcy3Q8VHH7 1145 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mmrn2A6H6E2 943 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Becn2P0DM65 447 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ranbp1P34022 203 aaKnown RBP8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 RcvrnP34057 202 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Vgll3P85442 326 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Atp2a3Q64518 1038 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Mum1Q6DID5 682 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Depdc1bQ8BH88 529 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ndufab1Q9CR21 156 aa8.64□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Adcy5P84309 1262 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Map4k4P97820 1233 aaKnown RBP8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Cwc27Q3TKY6 469 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Maip1Q8BHE8 291 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ttc19Q8CC21 365 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Tpcn1Q9EQJ0 817 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Nfkbil1O88995 381 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 NonoQ99K48 473 aaKnown RBP8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Pacsin2Q9WVE8 486 aaKnown RBP8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Plcb1Q9Z1B3 1216 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 GopcQ8BH60 463 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Pym1Q8CHP5 203 aaKnown RBP8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Arhgef6Q8K4I3 771 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Nrbf2Q8VCQ3 287 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Stx6Q9JKK1 255 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gm28043E0CXC2 719 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Micall2Q3TN34 1009 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Cep57Q8CEE0 500 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Amotl1Q9D4H4 968 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ccnb3Q810T2 1396 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Cep162Q6ZQ06 1403 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Frmpd1A2AKB4 1549 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Erich2E9Q1A6 463 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gm5862K7N5V5 267 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Krt18P05784 423 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 NgdnQ9DB96 315 aaKnown RBP8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Egfl6Q9JJZ5 550 aa8.63□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gm10378F6XQQ1 160 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Strn4P58404 760 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 EsrrgP62509 458 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Drc1Q3USS3 753 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gzf1Q4VBD9 706 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Trim6Q8BGE7 488 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Kdm4aQ8BW72 1064 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gimap6Q8K349 305 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 SyncQ9EPM5 470 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gm10354K7N6A0 256 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Rnf40Q3U319 1001 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ptpdc1Q6NZK8 747 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ano10Q8BH79 659 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Kif18aQ91WD7 886 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Trim16Q99PP9 556 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Fsip1Q9D3V5 435 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Rad50P70388 1312 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Dapk3O54784 448 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 ArsiQ32KI9 573 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Srgap3Q812A2 1099 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Tcp11l1Q8BTG3 509 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 4930572O03RikQ8C5Y0 211 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Cdk5rap3Q99LM2 503 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 PhbP67778 272 aaKnown RBP8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Kifap3P70188 793 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 RragbQ6NTA4 374 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ublcp1Q8BGR9 318 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Atp6v1aP50516 617 aaKnown RBP8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gjb2Q00977 226 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ppp1r21Q3TDD9 780 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Cabs1Q8C633 391 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 TkfcQ8VC30 578 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Sh2b1Q91ZM2 756 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Ndc80Q9D0F1 642 aaKnown RBP8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Polr3cQ9D483 533 aa8.62□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Armc3A2AU72 881 aa8.61□□□□□ -1.03
Pcdh9-204ENSMUST00000193901 Gm17615E9Q9P2 165 aa8.61□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 929.5 ms